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The map label for this gene is ydiB [H]

Identifier: 150004443

GI number: 150004443

Start: 2463785

End: 2464213

Strand: Reverse

Name: ydiB [H]

Synonym: BVU_1890

Alternate gene names: 150004443

Gene position: 2464213-2463785 (Counterclockwise)

Preceding gene: 150004444

Following gene: 150004442

Centisome position: 47.73

GC content: 41.26

Gene sequence:

>429_bases
ATGGATATGGAAATTAAAATCAATTCTTTAGACTCTATCCACGAAGCTGCCAAACAATTCATCGCAGCTATGGGTGATAA
TACCGTTTTTGCTTTCTACGGAAAGATGGGAGCCGGTAAAACAACATTTATCAAAGCTGTATGCGAAGAGCTGGGGGTAA
CAGATGTCATCAACTCGCCAACTTTTGCCATTGTCAACGAATACCGTTCGGATGAAACCGGTGAACTTATTTACCATTTT
GATTTCTATCGTATCAAGAAACTGGACGAAGTATACGACATGGGATATGAGGATTATTTCTATAGCGGTGCCCTCTGCTT
CATCGAATGGCCGGAACTGGTAGAAGAACTTTTGCCTGGCAATGCTGTAAAAGTCGAGATTGAAGAATCTGAAGATGGAA
GCCGAATCATGCACTTTGAAGCTGAATAA

Upstream 100 bases:

>100_bases
TCGGGTGCAGCAATAATCTTTTTTTCAATCCTCATCTATACTTTTTGCAAAATGGGGAAAAGCATGTACCTTTGCAAACA
AAAGAAACTCAATCAAACCA

Downstream 100 bases:

>100_bases
AAGAAAAATATTCACTGTAGGGACGAACAAAATCTGCCCCTACAGCCAAATTCATTAAATTATGGGAATGCATTATCTGA
TCCAAGCCATATTCGTATTG

Product: putative ATPase/GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDMEIKINSLDSIHEAAKQFIAAMGDNTVFAFYGKMGAGKTTFIKAVCEELGVTDVINSPTFAIVNEYRSDETGELIYHF
DFYRIKKLDEVYDMGYEDYFYSGALCFIEWPELVEELLPGNAVKVEIEESEDGSRIMHFEAE

Sequences:

>Translated_142_residues
MDMEIKINSLDSIHEAAKQFIAAMGDNTVFAFYGKMGAGKTTFIKAVCEELGVTDVINSPTFAIVNEYRSDETGELIYHF
DFYRIKKLDEVYDMGYEDYFYSGALCFIEWPELVEELLPGNAVKVEIEESEDGSRIMHFEAE
>Mature_142_residues
MDMEIKINSLDSIHEAAKQFIAAMGDNTVFAFYGKMGAGKTTFIKAVCEELGVTDVINSPTFAIVNEYRSDETGELIYHF
DFYRIKKLDEVYDMGYEDYFYSGALCFIEWPELVEELLPGNAVKVEIEESEDGSRIMHFEAE

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=106, Percent_Identity=38.6792452830189, Blast_Score=87, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16198; Mature: 16198

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMEIKINSLDSIHEAAKQFIAAMGDNTVFAFYGKMGAGKTTFIKAVCEELGVTDVINSP
CCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
TFAIVNEYRSDETGELIYHFDFYRIKKLDEVYDMGYEDYFYSGALCFIEWPELVEELLPG
HHEEEHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCHHEECCEEEEEECHHHHHHHCCC
NAVKVEIEESEDGSRIMHFEAE
CEEEEEEECCCCCCEEEEEECC
>Mature Secondary Structure
MDMEIKINSLDSIHEAAKQFIAAMGDNTVFAFYGKMGAGKTTFIKAVCEELGVTDVINSP
CCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
TFAIVNEYRSDETGELIYHFDFYRIKKLDEVYDMGYEDYFYSGALCFIEWPELVEELLPG
HHEEEHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCHHEECCEEEEEECHHHHHHHCCC
NAVKVEIEESEDGSRIMHFEAE
CEEEEEEECCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]