| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is trxA [C]
Identifier: 150004439
GI number: 150004439
Start: 2460963
End: 2461277
Strand: Direct
Name: trxA [C]
Synonym: BVU_1886
Alternate gene names: 150004439
Gene position: 2460963-2461277 (Clockwise)
Preceding gene: 150004438
Following gene: 150004440
Centisome position: 47.66
GC content: 40.0
Gene sequence:
>315_bases ATGGCACTAGAAATTAAAGATAGCAATTTTGAAGAATTGCTGGCATCAGGCAAGCCTGTAGTAGTGGACTTTTGGGCAAC ATGGTGTGGTCCTTGTAAAAAAATAGCTCCGGATGTTGAAGCTTTGGCAGAAGAATATAAGGATCAGGTAATAATTGGAA AGTGCGACGTGGATGATAACGACGAACTGACCGGTAAATTTGGTGTACGTAACATTCCTACTGTTCTTTTTATCAAGGAC GGTGAAGTGAAAGATAAGACTGTAGGTGCAGTGACCAAAGCTCAGCTGGAAGAAAAAATAAAAGCTTTACTGTAA
Upstream 100 bases:
>100_bases AAAAAGAGATCATGACTTATTTAAAGAGCCAACCACAGCTCTCTTACAAAATTAATTAGTATATTTGCGCTAACATTTTA AATAACTAAGTATAATAATT
Downstream 100 bases:
>100_bases TAAAAAGAATATTCACCCCTTTAATATATACGACTATGGGAATGGAAGACGATTTCTTATTGGAAGATGAGGATGATCAA AAAACGATAGAGTTTATCAA
Product: thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MALEIKDSNFEELLASGKPVVVDFWATWCGPCKKIAPDVEALAEEYKDQVIIGKCDVDDNDELTGKFGVRNIPTVLFIKD GEVKDKTVGAVTKAQLEEKIKALL
Sequences:
>Translated_104_residues MALEIKDSNFEELLASGKPVVVDFWATWCGPCKKIAPDVEALAEEYKDQVIIGKCDVDDNDELTGKFGVRNIPTVLFIKD GEVKDKTVGAVTKAQLEEKIKALL >Mature_103_residues ALEIKDSNFEELLASGKPVVVDFWATWCGPCKKIAPDVEALAEEYKDQVIIGKCDVDDNDELTGKFGVRNIPTVLFIKDG EVKDKTVGAVTKAQLEEKIKALL
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=94, Percent_Identity=41.4893617021277, Blast_Score=80, Evalue=3e-16, Organism=Homo sapiens, GI20070125, Length=93, Percent_Identity=35.4838709677419, Blast_Score=67, Evalue=2e-12, Organism=Homo sapiens, GI50592994, Length=103, Percent_Identity=42.7184466019417, Blast_Score=67, Evalue=4e-12, Organism=Homo sapiens, GI21361657, Length=83, Percent_Identity=39.7590361445783, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI87082331, Length=103, Percent_Identity=41.747572815534, Blast_Score=95, Evalue=1e-21, Organism=Escherichia coli, GI1788936, Length=95, Percent_Identity=41.0526315789474, Blast_Score=85, Evalue=1e-18, Organism=Escherichia coli, GI87081747, Length=102, Percent_Identity=35.2941176470588, Blast_Score=69, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17509965, Length=107, Percent_Identity=42.9906542056075, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71980565, Length=92, Percent_Identity=42.3913043478261, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71980562, Length=86, Percent_Identity=41.8604651162791, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI212646193, Length=94, Percent_Identity=35.1063829787234, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17556044, Length=78, Percent_Identity=39.7435897435897, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71998175, Length=86, Percent_Identity=40.6976744186046, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17554386, Length=102, Percent_Identity=36.2745098039216, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17510299, Length=88, Percent_Identity=42.0454545454545, Blast_Score=65, Evalue=8e-12, Organism=Caenorhabditis elegans, GI25144092, Length=80, Percent_Identity=38.75, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17549970, Length=81, Percent_Identity=35.8024691358025, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321648, Length=92, Percent_Identity=46.7391304347826, Blast_Score=79, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323072, Length=95, Percent_Identity=44.2105263157895, Blast_Score=74, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6319925, Length=96, Percent_Identity=39.5833333333333, Blast_Score=71, Evalue=3e-14, Organism=Drosophila melanogaster, GI24639826, Length=89, Percent_Identity=46.0674157303371, Blast_Score=86, Evalue=6e-18, Organism=Drosophila melanogaster, GI17648013, Length=88, Percent_Identity=43.1818181818182, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI24583090, Length=88, Percent_Identity=43.1818181818182, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI17530795, Length=76, Percent_Identity=40.7894736842105, Blast_Score=75, Evalue=5e-15, Organism=Drosophila melanogaster, GI28573567, Length=88, Percent_Identity=35.2272727272727, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI24664269, Length=76, Percent_Identity=42.1052631578947, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11454; Mature: 11323
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEIKDSNFEELLASGKPVVVDFWATWCGPCKKIAPDVEALAEEYKDQVIIGKCDVDDN CEEEECCCCHHHHHHCCCCEEEEEHHHHCCCHHHCCCCHHHHHHHHCCCEEEEECCCCCC DELTGKFGVRNIPTVLFIKDGEVKDKTVGAVTKAQLEEKIKALL CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALEIKDSNFEELLASGKPVVVDFWATWCGPCKKIAPDVEALAEEYKDQVIIGKCDVDDN EEEECCCCHHHHHHCCCCEEEEEHHHHCCCHHHCCCCHHHHHHHHCCCEEEEECCCCCC DELTGKFGVRNIPTVLFIKDGEVKDKTVGAVTKAQLEEKIKALL CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7021558 [H]