Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is hflX [H]

Identifier: 150004409

GI number: 150004409

Start: 2418421

End: 2419674

Strand: Direct

Name: hflX [H]

Synonym: BVU_1856

Alternate gene names: 150004409

Gene position: 2418421-2419674 (Clockwise)

Preceding gene: 150004408

Following gene: 150004410

Centisome position: 46.84

GC content: 40.59

Gene sequence:

>1254_bases
ATGAAAGAATTTGTAATTTCTGAAGCACAGGTTGAAACTGCCATCTTAGTTGGTTTGATTACTCAGACACAAGATGAGCG
TAAGACCAAGGAGTATTTGGATGAGTTGGAGTTCTTGGCCGAAACGGCCGGAGCAACAGTGGTGAAAAGGTTTACTCAGA
AACTGCCTGCTGCCAATTCCGTGACCTATGTCGGTAAAGGAAAGCTGGAAGAAATCAAGGAATATATTCATCAGGAAGAG
GAAAATGAGCGTGAAGTCGGAATGGTGATTTTTGATGATGAACTTTCTGCCAAGCAGATACGTAATATAGAAGCTGAACT
GAAAGTGAAGATTTTGGACCGTACTTCGCTGATTCTGGATATTTTTGCCATGCGGGCTCAAACTGCAAATGCTAAAACAC
AAGTGGAGCTGGCCCAATATAAGTATATGCTGCCTCGTCTGCAACGTTTGTGGACTCACTTGGAGCGTCAGGGAGGTGGA
TCCGGTGCCGGTGGAGGTAAAGGCTCTGTGGGATTACGTGGGCCGGGTGAAACTCAGTTGGAAATGGACCGTCGTATCAT
TTTGAATCGTATGTCATTGTTGAAAGAACGGTTGGCTGAAATTGATAAACAGAAGTCCACTCAACGTAAAAACCGTGGGC
GTATGATACGTGTAGCTTTGGTAGGGTATACCAATGTGGGAAAATCTACTTTAATGAATTTGCTTTCAAAAAGCGAGGTC
TTTGCTGAAAATAAACTTTTTGCAACATTGGACACCACAGTACGCAAAGTGATTATTGAGAATCTGCCATTTCTGCTTAC
AGATACCGTAGGATTTATCCGTAAATTACCAACGGATTTGGTTGATTCCTTTAAATCAACCTTGGACGAAGTGCGTGAAG
CTGATCTACTGATTCATGTGGTGGATATTTCTCATCCGGATTTTGAGGAACAAATTTCTGTGGTTGATAAAACGATTGCT
GATTTGGGGGCAGGTGGAAAGCCTACCATGATTGTTTTTAACAAGATAGATGCTTATACCTATATAGAGAAAGCAGAGGA
TGATTTGACTCCTAAAACCAGGGAGAATATTACATTGGAAGAACTGATGAAGACATGGATGGCAAAATTGAATGATAATT
GTATCTTCATTTCTGCCAGAGAGAAAATAAATATGGATGAATTGAAGACTATTATATATAATAAGGTGCGCGAGCTACAC
GTACAGAAGTATCCTTATAACGATTTTCTTTATCAAACCTATGATGAAGAATAA

Upstream 100 bases:

>100_bases
CAACTATAGGGAATAACTGTAATAAAAAAGAGGATGACGTTCAACGTTCATCCTCTTTTTTTGTTATATTTGTCGCGAAC
TTATTTAGATTGATAGATAA

Downstream 100 bases:

>100_bases
ATACATATAGAAGATGAAAACTTATCGTTCACTTACACAAGAAGAAATACAACAATTAAAAGAGAGATCATGCACTGCGG
TTGATTGGGATGAAATTGAA

Product: putative GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKEFVISEAQVETAILVGLITQTQDERKTKEYLDELEFLAETAGATVVKRFTQKLPAANSVTYVGKGKLEEIKEYIHQEE
ENEREVGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLPRLQRLWTHLERQGGG
SGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKERLAEIDKQKSTQRKNRGRMIRVALVGYTNVGKSTLMNLLSKSEV
FAENKLFATLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDFEEQISVVDKTIA
DLGAGGKPTMIVFNKIDAYTYIEKAEDDLTPKTRENITLEELMKTWMAKLNDNCIFISAREKINMDELKTIIYNKVRELH
VQKYPYNDFLYQTYDEE

Sequences:

>Translated_417_residues
MKEFVISEAQVETAILVGLITQTQDERKTKEYLDELEFLAETAGATVVKRFTQKLPAANSVTYVGKGKLEEIKEYIHQEE
ENEREVGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLPRLQRLWTHLERQGGG
SGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKERLAEIDKQKSTQRKNRGRMIRVALVGYTNVGKSTLMNLLSKSEV
FAENKLFATLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDFEEQISVVDKTIA
DLGAGGKPTMIVFNKIDAYTYIEKAEDDLTPKTRENITLEELMKTWMAKLNDNCIFISAREKINMDELKTIIYNKVRELH
VQKYPYNDFLYQTYDEE
>Mature_417_residues
MKEFVISEAQVETAILVGLITQTQDERKTKEYLDELEFLAETAGATVVKRFTQKLPAANSVTYVGKGKLEEIKEYIHQEE
ENEREVGMVIFDDELSAKQIRNIEAELKVKILDRTSLILDIFAMRAQTANAKTQVELAQYKYMLPRLQRLWTHLERQGGG
SGAGGGKGSVGLRGPGETQLEMDRRIILNRMSLLKERLAEIDKQKSTQRKNRGRMIRVALVGYTNVGKSTLMNLLSKSEV
FAENKLFATLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHVVDISHPDFEEQISVVDKTIA
DLGAGGKPTMIVFNKIDAYTYIEKAEDDLTPKTRENITLEELMKTWMAKLNDNCIFISAREKINMDELKTIIYNKVRELH
VQKYPYNDFLYQTYDEE

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133116, Length=200, Percent_Identity=34, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI310133118, Length=200, Percent_Identity=34, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI310124269, Length=185, Percent_Identity=32.4324324324324, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI310124267, Length=185, Percent_Identity=32.4324324324324, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI310124171, Length=185, Percent_Identity=32.4324324324324, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI310124169, Length=185, Percent_Identity=32.4324324324324, Blast_Score=99, Evalue=6e-21,
Organism=Escherichia coli, GI1790615, Length=329, Percent_Identity=44.6808510638298, Blast_Score=253, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI17561038, Length=321, Percent_Identity=28.6604361370716, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24650079, Length=324, Percent_Identity=30.8641975308642, Blast_Score=124, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 47627; Mature: 47627

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFVISEAQVETAILVGLITQTQDERKTKEYLDELEFLAETAGATVVKRFTQKLPAANS
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VTYVGKGKLEEIKEYIHQEEENEREVGMVIFDDELSAKQIRNIEAELKVKILDRTSLILD
EEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCHHEEEEEECHHHHHHH
IFAMRAQTANAKTQVELAQYKYMLPRLQRLWTHLERQGGGSGAGGGKGSVGLRGPGETQL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
EMDRRIILNRMSLLKERLAEIDKQKSTQRKNRGRMIRVALVGYTNVGKSTLMNLLSKSEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
FAENKLFATLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHV
HHCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEE
VDISHPDFEEQISVVDKTIADLGAGGKPTMIVFNKIDAYTYIEKAEDDLTPKTRENITLE
EECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHH
ELMKTWMAKLNDNCIFISAREKINMDELKTIIYNKVRELHVQKYPYNDFLYQTYDEE
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MKEFVISEAQVETAILVGLITQTQDERKTKEYLDELEFLAETAGATVVKRFTQKLPAANS
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VTYVGKGKLEEIKEYIHQEEENEREVGMVIFDDELSAKQIRNIEAELKVKILDRTSLILD
EEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCHHEEEEEECHHHHHHH
IFAMRAQTANAKTQVELAQYKYMLPRLQRLWTHLERQGGGSGAGGGKGSVGLRGPGETQL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
EMDRRIILNRMSLLKERLAEIDKQKSTQRKNRGRMIRVALVGYTNVGKSTLMNLLSKSEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
FAENKLFATLDTTVRKVIIENLPFLLTDTVGFIRKLPTDLVDSFKSTLDEVREADLLIHV
HHCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEE
VDISHPDFEEQISVVDKTIADLGAGGKPTMIVFNKIDAYTYIEKAEDDLTPKTRENITLE
EECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHH
ELMKTWMAKLNDNCIFISAREKINMDELKTIIYNKVRELHVQKYPYNDFLYQTYDEE
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]