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The map label for this gene is perM [C]

Identifier: 150004388

GI number: 150004388

Start: 2380262

End: 2381398

Strand: Reverse

Name: perM [C]

Synonym: BVU_1835

Alternate gene names: 150004388

Gene position: 2381398-2380262 (Counterclockwise)

Preceding gene: 150004389

Following gene: 150004387

Centisome position: 46.12

GC content: 40.9

Gene sequence:

>1137_bases
ATGATACAGAAAAAAATAACATTCGATAGTTTTATCCGCGGAATATTGACAGCGATGGTCATTATCGGCATTCTATATCT
GGTCAACCGACTCAGCGGAGTGCTGCTTCCTTTCTTCATAGCATGGCTGATAGCCTATCTTATCTATCCGATGGTCATTT
TCTTTCAGAACAAATTGCGTCTGAGGAACCGGGTAATCTCCATATTAGTTGTTTTGCTGGTATTGCTGTCCATTATCACT
TTAGCATTTGTAGGACTTGTACCACCAATCATTGAAGAATTCGGCAAACTGAAAGAATTGCTCACCGCCTATTTTATCGA
AGGATCCAAGCAAGCAGCCATTCCCGGCACAGTGGCCAATTTCATAAAAGAGCACATAGATATGTTGAAAATACACGAAG
CGCTGAACGAAAGCAATTTTGCGAATACCATGCGTAATGTTCTTCCCCAAGTATGGGCATTGCTGACCCAATCTGTCAAT
ATTGTATTCAGTGTATTCACCTCATTCATCATCCTGCTGTACACTTTCTTCATTCTATTAGATTATGAAGCCATTGCACG
GGGATGGATAAAACTGATCCCTGCCAGACACCGTGAAATGACAGTACATATTGTCACGGATGTACAGGACGGCATGAACA
AATATTTCCGCGGGCAGGCGTTTGTCGCTTTTTGTGTAGGGATTCTGTTCAGCATAGGGTTTCTTATTATTGATTTCCCG
TTAGCCATCGGTTTCGGATTGTTTATCGGGCTTCTCAATATGGTTCCCTACCTTCAGCTTATCGCTTTTATTCCCACAGT
CTTATTAGCCTTACTGAAGGCTGCGGATACAGGAGAGAATTTCTGGTGGATATTATTTTGCGCCTTCCTTGTGTTCTGCA
TCGTACAAATTATACAAGACGGTCTGATTGTACCGAAAGTTATGGGAAAAATCACAGGATTGAATCCTGCTATCATTTTA
TTATCCCTCTCCGTCTGGGGGGCATTAATGGGAATTGTAGGTATGATTATCGCTTTGCCTTGTACCAGCTTGATGCTTTC
TTACTATCAAAGATACATACGAATAAAAGAAAAAGAATTTTCCGGAGGGATAGAACACTCTGATTTTCAGCACAAAGAGA
ATTCTAACGAAAAATAA

Upstream 100 bases:

>100_bases
CGGGTCCTATTAGGGGAAAAGGCAGACTATGAGCCTCTTTGCCGGACCTGCTATATGGAAGCTTTGAAAGAGGAAACTGA
AAATAAATAACACACACTTT

Downstream 100 bases:

>100_bases
TTCAAAAAAATCAAGTAATATATTTGCATATTTCATCTAAAACGTCTACCTTTGCACTCGCAATTCGGAAGAATAGCAAT
AACAAAGGATTGATTCGCTA

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MIQKKITFDSFIRGILTAMVIIGILYLVNRLSGVLLPFFIAWLIAYLIYPMVIFFQNKLRLRNRVISILVVLLVLLSIIT
LAFVGLVPPIIEEFGKLKELLTAYFIEGSKQAAIPGTVANFIKEHIDMLKIHEALNESNFANTMRNVLPQVWALLTQSVN
IVFSVFTSFIILLYTFFILLDYEAIARGWIKLIPARHREMTVHIVTDVQDGMNKYFRGQAFVAFCVGILFSIGFLIIDFP
LAIGFGLFIGLLNMVPYLQLIAFIPTVLLALLKAADTGENFWWILFCAFLVFCIVQIIQDGLIVPKVMGKITGLNPAIIL
LSLSVWGALMGIVGMIIALPCTSLMLSYYQRYIRIKEKEFSGGIEHSDFQHKENSNEK

Sequences:

>Translated_378_residues
MIQKKITFDSFIRGILTAMVIIGILYLVNRLSGVLLPFFIAWLIAYLIYPMVIFFQNKLRLRNRVISILVVLLVLLSIIT
LAFVGLVPPIIEEFGKLKELLTAYFIEGSKQAAIPGTVANFIKEHIDMLKIHEALNESNFANTMRNVLPQVWALLTQSVN
IVFSVFTSFIILLYTFFILLDYEAIARGWIKLIPARHREMTVHIVTDVQDGMNKYFRGQAFVAFCVGILFSIGFLIIDFP
LAIGFGLFIGLLNMVPYLQLIAFIPTVLLALLKAADTGENFWWILFCAFLVFCIVQIIQDGLIVPKVMGKITGLNPAIIL
LSLSVWGALMGIVGMIIALPCTSLMLSYYQRYIRIKEKEFSGGIEHSDFQHKENSNEK
>Mature_378_residues
MIQKKITFDSFIRGILTAMVIIGILYLVNRLSGVLLPFFIAWLIAYLIYPMVIFFQNKLRLRNRVISILVVLLVLLSIIT
LAFVGLVPPIIEEFGKLKELLTAYFIEGSKQAAIPGTVANFIKEHIDMLKIHEALNESNFANTMRNVLPQVWALLTQSVN
IVFSVFTSFIILLYTFFILLDYEAIARGWIKLIPARHREMTVHIVTDVQDGMNKYFRGQAFVAFCVGILFSIGFLIIDFP
LAIGFGLFIGLLNMVPYLQLIAFIPTVLLALLKAADTGENFWWILFCAFLVFCIVQIIQDGLIVPKVMGKITGLNPAIIL
LSLSVWGALMGIVGMIIALPCTSLMLSYYQRYIRIKEKEFSGGIEHSDFQHKENSNEK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=324, Percent_Identity=24.3827160493827, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42740; Mature: 42740

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]