| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is ytaP [H]
Identifier: 150004368
GI number: 150004368
Start: 2350987
End: 2352147
Strand: Direct
Name: ytaP [H]
Synonym: BVU_1814
Alternate gene names: 150004368
Gene position: 2350987-2352147 (Clockwise)
Preceding gene: 150004367
Following gene: 150004369
Centisome position: 45.53
GC content: 45.31
Gene sequence:
>1161_bases ATGAAGAATACTGTAATTTGTTTATTGTTGTTTGGGATAAGTCTGACGGCTTCTGCTCAAGAAAAGGTGGAAACAGTCTC TATGCGTTATGAAACGCAGAATGATATGCCGCTGTTCTATCAGAAGATGAAAGAAAACCTGACTTATCCTATGGCTTGGG GAAATTCTTCCATCAGAAATTTCAAGAAGTGGCGTGAGGAAGCTCGAAAAACGTTATTGGATTGCATGTTGCCTGCTCCT CCTGCTACGGCTTTTGATAAGGAAGTGATAGATACCGAGCAACGGAATGGATATAGGGCGGAGAAGATTTTGTTCAGTGT TTCGGAATATTCTCGTGTTCCCGCTTATCTGTTGGTTCCTGACGGGAATGGCCCGTTCCCGGCAGTATTGCTGCTTCACG ATCACGGTGCGCATTTTTCGATAGGGAAAGAGAAAATGGTACGTCCGTTCGGTGTGGAAGCATCTGTACTGGCCGATGCG GACGATTGGGCGGAAAAATGTTATGACAAACAGTATGTAGGTGATTATCTGGCAAGTCACGGATATGTAGTGCTTGCTGT GGATGCCTTGTTTTGGGGGGAACGGGGACGTAAGGAAGGAGTACGCTATGACTCACAGCAAGCGTTGGCGGCCAATATGT TACAGATGGGAATGTCTTGGGGAGCCTTGATAGCCTGGGATGATATCCGTAGCGCGGAATTTCTGGCCTCATTGCCCATG GTTCATAAGGAAAAGATAGGTACTATGGGATTTTCTATGGGAGCACATCGTGCCTGGATGGTCAGTGCCGCTACAGATGT GGTGAAGGCAGGCGCTGCTGTGTGCTGGATGAATACTACAGATAGCTTAATGACACTTACCAATAATCAGAACAAAGGCG GGTCTGCTTATTCCATGATTATTCCCGGAATACGGAATTGGATGGATTATCCTCATGTGGCATCTATCGCCTGCCCCAAA CCGATGTTGTTCATCAATGGCTTGCGGGACAAACTTTTTCCTGTAAAGGGCGTTGAAAGCGCTTTCTCTACCATGCAGGA TGTATGGAAGAGTCAATCGGTAGAAAATCTGTTGACTACCAAGTTCTATGATTTGCCCCATTTTTGCAGTAAGGAGATAC AGGATGATATACTTGAGTTCTTTAATCAAAATTTAAAATAG
Upstream 100 bases:
>100_bases GTACCACCGGAGAATTGTGCATCTCTGTTGGGGATTATATTGATAATATGATAAAATTAATTAGTTACCTTGAAAAGTAA AGTTTGTTAGGTATAGGTTT
Downstream 100 bases:
>100_bases AAAGCGATGAAAATTAAGATGTTGATGGCATTTGTTGCCTTGTTGTTTTCTGCTTTTACGGCAGACCGCACAATTACTAT CTTTATGATAGGTGACTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRNFKKWREEARKTLLDCMLPAP PATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVPDGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADA DDWAEKCYDKQYVGDYLASHGYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMIIPGIRNWMDYPHVASIACPK PMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTTKFYDLPHFCSKEIQDDILEFFNQNLK
Sequences:
>Translated_386_residues MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRNFKKWREEARKTLLDCMLPAP PATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVPDGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADA DDWAEKCYDKQYVGDYLASHGYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMIIPGIRNWMDYPHVASIACPK PMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTTKFYDLPHFCSKEIQDDILEFFNQNLK >Mature_386_residues MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRNFKKWREEARKTLLDCMLPAP PATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVPDGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADA DDWAEKCYDKQYVGDYLASHGYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMIIPGIRNWMDYPHVASIACPK PMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTTKFYDLPHFCSKEIQDDILEFFNQNLK
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR002471 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: NA
Molecular weight: Translated: 43462; Mature: 43462
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRN CCCCEEEHHHHHCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEEECCCHHHHH FKKWREEARKTLLDCMLPAPPATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVP HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHCCCCCHHHHHHHHHHHCCCCEEEEEE DGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADADDWAEKCYDKQYVGDYLASH CCCCCCCEEEEEECCCCCEECCHHHHCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHCC GYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM CEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCH VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMI HHHHHHHHCCCCCCCCHHEEHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCEEEEE IPGIRNWMDYPHVASIACPKPMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTT HHHHHHHCCCCCCCHHCCCCCHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KFYDLPHFCSKEIQDDILEFFNQNLK HHHCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRN CCCCEEEHHHHHCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEEECCCHHHHH FKKWREEARKTLLDCMLPAPPATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVP HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHCCCCCHHHHHHHHHHHCCCCEEEEEE DGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADADDWAEKCYDKQYVGDYLASH CCCCCCCEEEEEECCCCCEECCHHHHCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHCC GYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM CEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCH VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMI HHHHHHHHCCCCCCCCHHEEHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCEEEEE IPGIRNWMDYPHVASIACPKPMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTT HHHHHHHCCCCCCCHHCCCCCHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KFYDLPHFCSKEIQDDILEFFNQNLK HHHCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]