Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is ytaP [H]

Identifier: 150004368

GI number: 150004368

Start: 2350987

End: 2352147

Strand: Direct

Name: ytaP [H]

Synonym: BVU_1814

Alternate gene names: 150004368

Gene position: 2350987-2352147 (Clockwise)

Preceding gene: 150004367

Following gene: 150004369

Centisome position: 45.53

GC content: 45.31

Gene sequence:

>1161_bases
ATGAAGAATACTGTAATTTGTTTATTGTTGTTTGGGATAAGTCTGACGGCTTCTGCTCAAGAAAAGGTGGAAACAGTCTC
TATGCGTTATGAAACGCAGAATGATATGCCGCTGTTCTATCAGAAGATGAAAGAAAACCTGACTTATCCTATGGCTTGGG
GAAATTCTTCCATCAGAAATTTCAAGAAGTGGCGTGAGGAAGCTCGAAAAACGTTATTGGATTGCATGTTGCCTGCTCCT
CCTGCTACGGCTTTTGATAAGGAAGTGATAGATACCGAGCAACGGAATGGATATAGGGCGGAGAAGATTTTGTTCAGTGT
TTCGGAATATTCTCGTGTTCCCGCTTATCTGTTGGTTCCTGACGGGAATGGCCCGTTCCCGGCAGTATTGCTGCTTCACG
ATCACGGTGCGCATTTTTCGATAGGGAAAGAGAAAATGGTACGTCCGTTCGGTGTGGAAGCATCTGTACTGGCCGATGCG
GACGATTGGGCGGAAAAATGTTATGACAAACAGTATGTAGGTGATTATCTGGCAAGTCACGGATATGTAGTGCTTGCTGT
GGATGCCTTGTTTTGGGGGGAACGGGGACGTAAGGAAGGAGTACGCTATGACTCACAGCAAGCGTTGGCGGCCAATATGT
TACAGATGGGAATGTCTTGGGGAGCCTTGATAGCCTGGGATGATATCCGTAGCGCGGAATTTCTGGCCTCATTGCCCATG
GTTCATAAGGAAAAGATAGGTACTATGGGATTTTCTATGGGAGCACATCGTGCCTGGATGGTCAGTGCCGCTACAGATGT
GGTGAAGGCAGGCGCTGCTGTGTGCTGGATGAATACTACAGATAGCTTAATGACACTTACCAATAATCAGAACAAAGGCG
GGTCTGCTTATTCCATGATTATTCCCGGAATACGGAATTGGATGGATTATCCTCATGTGGCATCTATCGCCTGCCCCAAA
CCGATGTTGTTCATCAATGGCTTGCGGGACAAACTTTTTCCTGTAAAGGGCGTTGAAAGCGCTTTCTCTACCATGCAGGA
TGTATGGAAGAGTCAATCGGTAGAAAATCTGTTGACTACCAAGTTCTATGATTTGCCCCATTTTTGCAGTAAGGAGATAC
AGGATGATATACTTGAGTTCTTTAATCAAAATTTAAAATAG

Upstream 100 bases:

>100_bases
GTACCACCGGAGAATTGTGCATCTCTGTTGGGGATTATATTGATAATATGATAAAATTAATTAGTTACCTTGAAAAGTAA
AGTTTGTTAGGTATAGGTTT

Downstream 100 bases:

>100_bases
AAAGCGATGAAAATTAAGATGTTGATGGCATTTGTTGCCTTGTTGTTTTCTGCTTTTACGGCAGACCGCACAATTACTAT
CTTTATGATAGGTGACTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRNFKKWREEARKTLLDCMLPAP
PATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVPDGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADA
DDWAEKCYDKQYVGDYLASHGYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM
VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMIIPGIRNWMDYPHVASIACPK
PMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTTKFYDLPHFCSKEIQDDILEFFNQNLK

Sequences:

>Translated_386_residues
MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRNFKKWREEARKTLLDCMLPAP
PATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVPDGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADA
DDWAEKCYDKQYVGDYLASHGYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM
VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMIIPGIRNWMDYPHVASIACPK
PMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTTKFYDLPHFCSKEIQDDILEFFNQNLK
>Mature_386_residues
MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRNFKKWREEARKTLLDCMLPAP
PATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVPDGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADA
DDWAEKCYDKQYVGDYLASHGYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM
VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMIIPGIRNWMDYPHVASIACPK
PMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTTKFYDLPHFCSKEIQDDILEFFNQNLK

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925
- InterPro:   IPR002471 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 43462; Mature: 43462

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRN
CCCCEEEHHHHHCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEEECCCHHHHH
FKKWREEARKTLLDCMLPAPPATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHCCCCCHHHHHHHHHHHCCCCEEEEEE
DGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADADDWAEKCYDKQYVGDYLASH
CCCCCCCEEEEEECCCCCEECCHHHHCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHCC
GYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM
CEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCH
VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMI
HHHHHHHHCCCCCCCCHHEEHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCEEEEE
IPGIRNWMDYPHVASIACPKPMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTT
HHHHHHHCCCCCCCHHCCCCCHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KFYDLPHFCSKEIQDDILEFFNQNLK
HHHCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNTVICLLLFGISLTASAQEKVETVSMRYETQNDMPLFYQKMKENLTYPMAWGNSSIRN
CCCCEEEHHHHHCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEEECCCHHHHH
FKKWREEARKTLLDCMLPAPPATAFDKEVIDTEQRNGYRAEKILFSVSEYSRVPAYLLVP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHCCCCCHHHHHHHHHHHCCCCEEEEEE
DGNGPFPAVLLLHDHGAHFSIGKEKMVRPFGVEASVLADADDWAEKCYDKQYVGDYLASH
CCCCCCCEEEEEECCCCCEECCHHHHCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHCC
GYVVLAVDALFWGERGRKEGVRYDSQQALAANMLQMGMSWGALIAWDDIRSAEFLASLPM
CEEEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCH
VHKEKIGTMGFSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMI
HHHHHHHHCCCCCCCCHHEEHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCEEEEE
IPGIRNWMDYPHVASIACPKPMLFINGLRDKLFPVKGVESAFSTMQDVWKSQSVENLLTT
HHHHHHHCCCCCCCHHCCCCCHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KFYDLPHFCSKEIQDDILEFFNQNLK
HHHCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]