| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004341
Identifier: 150004341
GI number: 150004341
Start: 2298224
End: 2300158
Strand: Direct
Name: 150004341
Synonym: BVU_1787
Alternate gene names: NA
Gene position: 2298224-2300158 (Clockwise)
Preceding gene: 150004340
Following gene: 150004342
Centisome position: 44.51
GC content: 46.61
Gene sequence:
>1935_bases TTGAAAAAGGAAAGTAGTCTTTGCTGGGAGGGTCCGTCGGATATTGTTCTTTATATAAATGGTGTAAAACAGTCTGTTTC CGGTAAACAGGTTATTTTACCCGTGGGCAGATCCTCTTTATTGTTTGAGGTGACAACGGATGACTCATTACCTTGTATCA TTCTGAAAGGGGCGGGACTGGAAAATCCGGATGAATGGCAAGTCAGCATGGATAAAGAGCATTGGACAATACCCGAGAGT GCCGTCATGTATAATAAACCGGGCGTGCTGCCGGATGCTCCGCAAGATATGACAGCCCGGATTAAACCTTCACAAATACT CCCCATGCGCAATGCTGAGATGCAAGGTAAAGACGGAATTAGTATCGGAAAGAATGGTTATGTCCTCATCGACTTTTTCC ATCTTGAGATTGGAACACTGACCTTTCAAGCGAAAGGAAAGGGAACTATAACCGTACGCGTTGGCGAAACTCCCGAAGAA GCACTGGAACGGGATGATAAGAAACTGGAACAATATCCATTGGCTCCTGTTACCTTGTCAGAAGAAGGAGGCACCATCAC TTTGCCGGAACGCGCTCTCCGATATGTTTCACTGGAATGCGACAAGGGGGCTGAGATTACCTCCCTTCGTTTTGATGCGT CATTGTGGCCGGTAGAGCACCAGATGCAGTTTGAAACGGATGATGATTATGTGAACAACCTGTTCAAAATGAGCAGTGCG ACATTGCATACTAGTATGCACCGCTTTTATCTGGACGGGGTGAAGCGTGATTTTCTTCCCTGGTCCATGGATGCGCTGGT CAGCACCCTGGCGGGGGATTATCTTTTCGGTGACCAGCAGGTGTCAAAAAACGGAATTTCCATAGCACTGATGCCGCTTG ATCCGCAGAAATCAGATATAGGGATTCCTGATTATCCGTTGCATGCCCTGTTCGGCCTGAAACAGAACTATCTGCGTTTC GGTGACTTGACCACTTCCCTTCAATACAAAGACCGCATCATCCAGTTGCTTGATTTTTATGCCTCCATCGTGGATGAGAA TGGTTTTGTACACGGCAATTATGGAGACAGACAGTTCGGTTATACCCCCGGATGGTCCACTTATAACGGTCCTGCCCGGA AAGGGGTGGCGGCCTATGCCCAGATCATGCTCTATTATAATTATGTGACCGGAGCTTATTTCGCGGATCTGTGGAAGGAG AGTGCATTGGCGGACAGATACCGCAAGTTGGCCCGGAATCTGAAAAAGAAGATTTTTGAACATTTTTGGGATAATGACCG GAAAGTCTTCATCAACGGTACAATGAATGACAATGTGACTGTGGACAAGCGTATTTCGCATCATGCCCAATATTGGGGAA TACTGGCCGATATCTTTCCCAAAGAACATTATGACAACCTGTTTGAAAATGTTCTGCCGAATTTGCCGAACTATTATGAG GTGGTCAGTTATGAGAAGGGTTATGAGTTTCTGGCTTATGCCAAAGCCGGGCGGATAAAAGAGTTATGGGATCATATCTA TGGTGTGTTCGGCGACTGGATGGATCAGGGACATACCCGTTTCCCGGAGAACTTTATGATGAATGCCTCCAGGGCCCGTC AACTGGTATTTTATAATCGTCCGTACGGCCTGAGTCTTTGTCATGGGGCGAATGGAGTCCCGGTAGTGGTAGGCGCATTG AACGGTCTTATCGGTTTCAGCCAGTCTTCGATGAAGACGAATGAATATACCATTAAACCGGAGTTACTCCATTTGAAGTG GATTCATTCCAGAATTCCGGTAAAGGAAGGATATATTGTCTTGAAACTGAATGCCGAGGGGGAGAGCACTATTGACATTC CGGCAGGATGTACAGTCAGAATTATAAAAAAGATCGGAAAGAAGCCACTGGTACTGAGAGAACAGGGCGGGTACAGCTTT CGGTTGAAGGACTGA
Upstream 100 bases:
>100_bases CAGCAACAATGTGCCCGTATCTCAAAAGAGCGTTGTGTCAATGTATCCGGGTAAATTTTTTGCAAAGAATAATCATGTCT GGTTCAGAAAAGAGGTAAGA
Downstream 100 bases:
>100_bases GCGTTGAATAGAAAAAAGTGTCTGTTCAATAGCCATATTCTTTATTAAGTCATTCTTAATGTACTTGATTAAACCGACAA GTTGCAAGTTCTTGAATTTC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Alfa-L-Rhamnosidase Homolog
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MKKESSLCWEGPSDIVLYINGVKQSVSGKQVILPVGRSSLLFEVTTDDSLPCIILKGAGLENPDEWQVSMDKEHWTIPES AVMYNKPGVLPDAPQDMTARIKPSQILPMRNAEMQGKDGISIGKNGYVLIDFFHLEIGTLTFQAKGKGTITVRVGETPEE ALERDDKKLEQYPLAPVTLSEEGGTITLPERALRYVSLECDKGAEITSLRFDASLWPVEHQMQFETDDDYVNNLFKMSSA TLHTSMHRFYLDGVKRDFLPWSMDALVSTLAGDYLFGDQQVSKNGISIALMPLDPQKSDIGIPDYPLHALFGLKQNYLRF GDLTTSLQYKDRIIQLLDFYASIVDENGFVHGNYGDRQFGYTPGWSTYNGPARKGVAAYAQIMLYYNYVTGAYFADLWKE SALADRYRKLARNLKKKIFEHFWDNDRKVFINGTMNDNVTVDKRISHHAQYWGILADIFPKEHYDNLFENVLPNLPNYYE VVSYEKGYEFLAYAKAGRIKELWDHIYGVFGDWMDQGHTRFPENFMMNASRARQLVFYNRPYGLSLCHGANGVPVVVGAL NGLIGFSQSSMKTNEYTIKPELLHLKWIHSRIPVKEGYIVLKLNAEGESTIDIPAGCTVRIIKKIGKKPLVLREQGGYSF RLKD
Sequences:
>Translated_644_residues MKKESSLCWEGPSDIVLYINGVKQSVSGKQVILPVGRSSLLFEVTTDDSLPCIILKGAGLENPDEWQVSMDKEHWTIPES AVMYNKPGVLPDAPQDMTARIKPSQILPMRNAEMQGKDGISIGKNGYVLIDFFHLEIGTLTFQAKGKGTITVRVGETPEE ALERDDKKLEQYPLAPVTLSEEGGTITLPERALRYVSLECDKGAEITSLRFDASLWPVEHQMQFETDDDYVNNLFKMSSA TLHTSMHRFYLDGVKRDFLPWSMDALVSTLAGDYLFGDQQVSKNGISIALMPLDPQKSDIGIPDYPLHALFGLKQNYLRF GDLTTSLQYKDRIIQLLDFYASIVDENGFVHGNYGDRQFGYTPGWSTYNGPARKGVAAYAQIMLYYNYVTGAYFADLWKE SALADRYRKLARNLKKKIFEHFWDNDRKVFINGTMNDNVTVDKRISHHAQYWGILADIFPKEHYDNLFENVLPNLPNYYE VVSYEKGYEFLAYAKAGRIKELWDHIYGVFGDWMDQGHTRFPENFMMNASRARQLVFYNRPYGLSLCHGANGVPVVVGAL NGLIGFSQSSMKTNEYTIKPELLHLKWIHSRIPVKEGYIVLKLNAEGESTIDIPAGCTVRIIKKIGKKPLVLREQGGYSF RLKD >Mature_644_residues MKKESSLCWEGPSDIVLYINGVKQSVSGKQVILPVGRSSLLFEVTTDDSLPCIILKGAGLENPDEWQVSMDKEHWTIPES AVMYNKPGVLPDAPQDMTARIKPSQILPMRNAEMQGKDGISIGKNGYVLIDFFHLEIGTLTFQAKGKGTITVRVGETPEE ALERDDKKLEQYPLAPVTLSEEGGTITLPERALRYVSLECDKGAEITSLRFDASLWPVEHQMQFETDDDYVNNLFKMSSA TLHTSMHRFYLDGVKRDFLPWSMDALVSTLAGDYLFGDQQVSKNGISIALMPLDPQKSDIGIPDYPLHALFGLKQNYLRF GDLTTSLQYKDRIIQLLDFYASIVDENGFVHGNYGDRQFGYTPGWSTYNGPARKGVAAYAQIMLYYNYVTGAYFADLWKE SALADRYRKLARNLKKKIFEHFWDNDRKVFINGTMNDNVTVDKRISHHAQYWGILADIFPKEHYDNLFENVLPNLPNYYE VVSYEKGYEFLAYAKAGRIKELWDHIYGVFGDWMDQGHTRFPENFMMNASRARQLVFYNRPYGLSLCHGANGVPVVVGAL NGLIGFSQSSMKTNEYTIKPELLHLKWIHSRIPVKEGYIVLKLNAEGESTIDIPAGCTVRIIKKIGKKPLVLREQGGYSF RLKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73081; Mature: 73081
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKESSLCWEGPSDIVLYINGVKQSVSGKQVILPVGRSSLLFEVTTDDSLPCIILKGAGL CCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEECCCC ENPDEWQVSMDKEHWTIPESAVMYNKPGVLPDAPQDMTARIKPSQILPMRNAEMQGKDGI CCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC SIGKNGYVLIDFFHLEIGTLTFQAKGKGTITVRVGETPEEALERDDKKLEQYPLAPVTLS EECCCCEEEEEEEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEC EEGGTITLPERALRYVSLECDKGAEITSLRFDASLWPVEHQMQFETDDDYVNNLFKMSSA CCCCEEECCHHHEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHCCH TLHTSMHRFYLDGVKRDFLPWSMDALVSTLAGDYLFGDQQVSKNGISIALMPLDPQKSDI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCCCCCCEEEEEECCCCCCCC GIPDYPLHALFGLKQNYLRFGDLTTSLQYKDRIIQLLDFYASIVDENGFVHGNYGDRQFG CCCCCHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC YTPGWSTYNGPARKGVAAYAQIMLYYNYVTGAYFADLWKESALADRYRKLARNLKKKIFE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFWDNDRKVFINGTMNDNVTVDKRISHHAQYWGILADIFPKEHYDNLFENVLPNLPNYYE HHCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHH VVSYEKGYEFLAYAKAGRIKELWDHIYGVFGDWMDQGHTRFPENFMMNASRARQLVFYNR HHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCEEEEEEC PYGLSLCHGANGVPVVVGALNGLIGFSQSSMKTNEYTIKPELLHLKWIHSRIPVKEGYIV CCCCEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCEEECCCEEEEEEHHHCCCCCCCEEE LKLNAEGESTIDIPAGCTVRIIKKIGKKPLVLREQGGYSFRLKD EEEECCCCCEEECCCCCHHHHHHHHCCCCEEEEECCCEEEEECC >Mature Secondary Structure MKKESSLCWEGPSDIVLYINGVKQSVSGKQVILPVGRSSLLFEVTTDDSLPCIILKGAGL CCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEECCCC ENPDEWQVSMDKEHWTIPESAVMYNKPGVLPDAPQDMTARIKPSQILPMRNAEMQGKDGI CCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC SIGKNGYVLIDFFHLEIGTLTFQAKGKGTITVRVGETPEEALERDDKKLEQYPLAPVTLS EECCCCEEEEEEEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEC EEGGTITLPERALRYVSLECDKGAEITSLRFDASLWPVEHQMQFETDDDYVNNLFKMSSA CCCCEEECCHHHEEEEEEECCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHCCH TLHTSMHRFYLDGVKRDFLPWSMDALVSTLAGDYLFGDQQVSKNGISIALMPLDPQKSDI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEECCCCCCCCCCEEEEEECCCCCCCC GIPDYPLHALFGLKQNYLRFGDLTTSLQYKDRIIQLLDFYASIVDENGFVHGNYGDRQFG CCCCCHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC YTPGWSTYNGPARKGVAAYAQIMLYYNYVTGAYFADLWKESALADRYRKLARNLKKKIFE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFWDNDRKVFINGTMNDNVTVDKRISHHAQYWGILADIFPKEHYDNLFENVLPNLPNYYE HHCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHH VVSYEKGYEFLAYAKAGRIKELWDHIYGVFGDWMDQGHTRFPENFMMNASRARQLVFYNR HHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHCCEEEEEEC PYGLSLCHGANGVPVVVGALNGLIGFSQSSMKTNEYTIKPELLHLKWIHSRIPVKEGYIV CCCCEEECCCCCCEEEEEHHHHHHCCCCCCCCCCCEEECCCEEEEEEHHHCCCCCCCEEE LKLNAEGESTIDIPAGCTVRIIKKIGKKPLVLREQGGYSFRLKD EEEECCCCCEEECCCCCHHHHHHHHCCCCEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA