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The map label for this gene is 150004333

Identifier: 150004333

GI number: 150004333

Start: 2285289

End: 2285843

Strand: Direct

Name: 150004333

Synonym: BVU_1779

Alternate gene names: NA

Gene position: 2285289-2285843 (Clockwise)

Preceding gene: 150004331

Following gene: 150004334

Centisome position: 44.26

GC content: 36.76

Gene sequence:

>555_bases
ATGTCTGGAAATTCTTTTAATGATATCTATACCTCTTATTATAAGAAGTCTTTTTTCTTTGCCAAATCATACGTTCATAA
TGATTTGGCGGCAGAAGATATTGCCTCCGAGGCATTAATAAAGTTGTGGGAAAAGTTGAAGGCCGAGCCTGTTGAAGAGA
AATATATCTTACCATTGTTACTGACAATTTTGAAGAACAAGGCTTTGGACTATCTAAAGCACGAGGAGGTAAAACGCAGT
GCTTTTGAAGTGATGGTCGACTGGCAACAACAGGAATTGTCTATCCGTATGTCTGCCTTGGAAGCGTGCAATCCTGATGA
GATTTTTTCGGAAGAAGTGGAAAAAATCATCAGTGCTACTTTAAGTACCTTGTCGGAACAGACCCGACGGGCATTTATTT
TGAGCCGTTTTGAAAATAAATCCAATAAAGAGATTGCCGAAGAGATGGAAATCTCTATAAAGGGGGTGGAATATCATATA
TCAAAAGCATTGAAAGTACTGCGGGTGACTTTAAAAGATTATCTTCCTTTATTTTATTTCTTCTTTTATTATTAA

Upstream 100 bases:

>100_bases
AATTAACAGGATAATTTTGTTTTTATCGAAGGTTTATTGCTAACTTTGCTCTACCATCGTAATATGGATGAAAAGCACAA
CCGATATACAAATGAGCAAA

Downstream 100 bases:

>100_bases
GCCTGACCGGATAGGGATACGGATGTTTTTGAGGACAAAAATGATTTTTTTATATTTTTCTTCATTTTCTTTTAGGGTAG
TTTCTTCTTGAGTCGTTTCT

Product: putative ECF-type RNA polymerase sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor; ECF-Type RNA Polymerase Sigma Factor; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; ECF-Type Sigma Factor; RNA Polymerase Sigma-H Factor

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSGNSFNDIYTSYYKKSFFFAKSYVHNDLAAEDIASEALIKLWEKLKAEPVEEKYILPLLLTILKNKALDYLKHEEVKRS
AFEVMVDWQQQELSIRMSALEACNPDEIFSEEVEKIISATLSTLSEQTRRAFILSRFENKSNKEIAEEMEISIKGVEYHI
SKALKVLRVTLKDYLPLFYFFFYY

Sequences:

>Translated_184_residues
MSGNSFNDIYTSYYKKSFFFAKSYVHNDLAAEDIASEALIKLWEKLKAEPVEEKYILPLLLTILKNKALDYLKHEEVKRS
AFEVMVDWQQQELSIRMSALEACNPDEIFSEEVEKIISATLSTLSEQTRRAFILSRFENKSNKEIAEEMEISIKGVEYHI
SKALKVLRVTLKDYLPLFYFFFYY
>Mature_183_residues
SGNSFNDIYTSYYKKSFFFAKSYVHNDLAAEDIASEALIKLWEKLKAEPVEEKYILPLLLTILKNKALDYLKHEEVKRSA
FEVMVDWQQQELSIRMSALEACNPDEIFSEEVEKIISATLSTLSEQTRRAFILSRFENKSNKEIAEEMEISIKGVEYHIS
KALKVLRVTLKDYLPLFYFFFYY

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21630; Mature: 21499

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNSFNDIYTSYYKKSFFFAKSYVHNDLAAEDIASEALIKLWEKLKAEPVEEKYILPLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LTILKNKALDYLKHEEVKRSAFEVMVDWQQQELSIRMSALEACNPDEIFSEEVEKIISAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LSTLSEQTRRAFILSRFENKSNKEIAEEMEISIKGVEYHISKALKVLRVTLKDYLPLFYF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFYY
HHHC
>Mature Secondary Structure 
SGNSFNDIYTSYYKKSFFFAKSYVHNDLAAEDIASEALIKLWEKLKAEPVEEKYILPLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LTILKNKALDYLKHEEVKRSAFEVMVDWQQQELSIRMSALEACNPDEIFSEEVEKIISAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LSTLSEQTRRAFILSRFENKSNKEIAEEMEISIKGVEYHISKALKVLRVTLKDYLPLFYF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFYY
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA