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The map label for this gene is yciC [H]

Identifier: 150004300

GI number: 150004300

Start: 2241922

End: 2243109

Strand: Direct

Name: yciC [H]

Synonym: BVU_1746

Alternate gene names: 150004300

Gene position: 2241922-2243109 (Clockwise)

Preceding gene: 150004287

Following gene: 150004302

Centisome position: 43.42

GC content: 40.82

Gene sequence:

>1188_bases
ATGAGAGTAAAAGAAATTCCTATACTGCTTTTGACCGGTTATCTGGGCAGTGGAAAAACGACATTAGTGAACCATATTCT
TTCTAATAAACGTGGTATTAAGTTTGCGGTTATTGTCAATGATATCGGTGAGGTGAATATTGATGCCGACCTCATACAGA
AGGGGGGGATTGTAGGAAAGAAAGACGAAAGCTTGGTAGCACTTCAGAACGGTTGTATCTGTTGTACTTTGAAGATGGAT
TTGGTGGAGCAGATAGATGATATTATGAAGCAGGAGCGTTTTGATTACATTGTGATTGAGGCAAGTGGGGTTTGTGAACC
AGCTCCTATCGCACAGACTATTTGTTCTATTTCAAGTATGGGGAATACGTACGGGGGATGTCGTTTGGATTGTATTGTGA
CTGTGGTAGATGCCTTGCGTCTGCAAAGTGAGTTTTCTTGTGGCAACGATTTGACCTGTAAGGGTATTGACGAAGAGGAT
ATTGAAAATTTGATTATCCAACAGATTGAATTTTGTAATGTTGTATTGTTGAATAAGGCCTCGGAAGTGAAACGTGACGA
ATTGGAACGTATCAAACAGATTATCCGTACATTGCAACCTGCAGCTGAAATAATAGAATGTGATTATGCTGATGCAGATT
TGGATAAGATAATCTATACTGAAGCATTTGACTTTGAACGTACTGCCACTTCTGCCGGTTGGATACGTGGAATAGAGAGT
GCCCTTACGGAAGAGCAGAAAAAAGAAGCGGAGGAGCATGAGCATCATCATCACGATGAGGAGCATGCACACCATCATCA
TCATGAAGGTAGTGAAGTGGATGAATATGGCATCAGTACTTTTGTGTATTATCGTCGTCCGGCTTTTGATATCCATAAAT
TTGATCGTTTTGTATCCACCCAGTGGAGTCGTAATATTATTCGAGCAAAAGGAGTCTGTTATTTCAGCAATAATCGTGAT
ATGTCTTTTCTTTTTGAACAGGCCGGTGTGCAGAAAAAGTTGAAGGAAGCCGGTTTATGGTATGCTACGGCACCTGAAGA
AGAACTGATAGAGGTAATACGTCAGGAGCCGGGCTTATTGCGGGATTGGGATGATAAATATGGAGATCGTATGCAGAAAA
TAGTTTTTATCGGGCGACATCTTGATAAAGAAGAGTTGATACGTGAACTTGATGAGTGTCTGGAATAG

Upstream 100 bases:

>100_bases
ATGTAAAGAGTCTTTTTTGTTTATAAGGTATAAAAAGATGTTTTCTATTGTTTGGAAATTAATCATTCTATACCTTTGTG
AAAGTAATATTGAATTTTAT

Downstream 100 bases:

>100_bases
GTTCTCAAAAGAGGATATAATCTTTGGTATGATGGCATCTCATTATACCAAAGATTTTTTATCTTATTTTCTTACCTTAT
TTCCATTGATATACAGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MRVKEIPILLLTGYLGSGKTTLVNHILSNKRGIKFAVIVNDIGEVNIDADLIQKGGIVGKKDESLVALQNGCICCTLKMD
LVEQIDDIMKQERFDYIVIEASGVCEPAPIAQTICSISSMGNTYGGCRLDCIVTVVDALRLQSEFSCGNDLTCKGIDEED
IENLIIQQIEFCNVVLLNKASEVKRDELERIKQIIRTLQPAAEIIECDYADADLDKIIYTEAFDFERTATSAGWIRGIES
ALTEEQKKEAEEHEHHHHDEEHAHHHHHEGSEVDEYGISTFVYYRRPAFDIHKFDRFVSTQWSRNIIRAKGVCYFSNNRD
MSFLFEQAGVQKKLKEAGLWYATAPEEELIEVIRQEPGLLRDWDDKYGDRMQKIVFIGRHLDKEELIRELDECLE

Sequences:

>Translated_395_residues
MRVKEIPILLLTGYLGSGKTTLVNHILSNKRGIKFAVIVNDIGEVNIDADLIQKGGIVGKKDESLVALQNGCICCTLKMD
LVEQIDDIMKQERFDYIVIEASGVCEPAPIAQTICSISSMGNTYGGCRLDCIVTVVDALRLQSEFSCGNDLTCKGIDEED
IENLIIQQIEFCNVVLLNKASEVKRDELERIKQIIRTLQPAAEIIECDYADADLDKIIYTEAFDFERTATSAGWIRGIES
ALTEEQKKEAEEHEHHHHDEEHAHHHHHEGSEVDEYGISTFVYYRRPAFDIHKFDRFVSTQWSRNIIRAKGVCYFSNNRD
MSFLFEQAGVQKKLKEAGLWYATAPEEELIEVIRQEPGLLRDWDDKYGDRMQKIVFIGRHLDKEELIRELDECLE
>Mature_395_residues
MRVKEIPILLLTGYLGSGKTTLVNHILSNKRGIKFAVIVNDIGEVNIDADLIQKGGIVGKKDESLVALQNGCICCTLKMD
LVEQIDDIMKQERFDYIVIEASGVCEPAPIAQTICSISSMGNTYGGCRLDCIVTVVDALRLQSEFSCGNDLTCKGIDEED
IENLIIQQIEFCNVVLLNKASEVKRDELERIKQIIRTLQPAAEIIECDYADADLDKIIYTEAFDFERTATSAGWIRGIES
ALTEEQKKEAEEHEHHHHDEEHAHHHHHEGSEVDEYGISTFVYYRRPAFDIHKFDRFVSTQWSRNIIRAKGVCYFSNNRD
MSFLFEQAGVQKKLKEAGLWYATAPEEELIEVIRQEPGLLRDWDDKYGDRMQKIVFIGRHLDKEELIRELDECLE

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=225, Percent_Identity=30.6666666666667, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI126722884, Length=225, Percent_Identity=30.6666666666667, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI148727351, Length=225, Percent_Identity=30.6666666666667, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI146231952, Length=225, Percent_Identity=30.2222222222222, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI223941779, Length=266, Percent_Identity=27.8195488721804, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI223941776, Length=226, Percent_Identity=29.646017699115, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI119120938, Length=251, Percent_Identity=28.2868525896414, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI87082430, Length=236, Percent_Identity=30.9322033898305, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788499, Length=102, Percent_Identity=36.2745098039216, Blast_Score=72, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6324356, Length=239, Percent_Identity=28.8702928870293, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 45099; Mature: 45099

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKEIPILLLTGYLGSGKTTLVNHILSNKRGIKFAVIVNDIGEVNIDADLIQKGGIVGK
CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCC
KDESLVALQNGCICCTLKMDLVEQIDDIMKQERFDYIVIEASGVCEPAPIAQTICSISSM
CCCCEEEECCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHC
GNTYGGCRLDCIVTVVDALRLQSEFSCGNDLTCKGIDEEDIENLIIQQIEFCNVVLLNKA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHCEEEECCH
SEVKRDELERIKQIIRTLQPAAEIIECDYADADLDKIIYTEAFDFERTATSAGWIRGIES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHCHHHHHHHHHH
ALTEEQKKEAEEHEHHHHDEEHAHHHHHEGSEVDEYGISTFVYYRRPAFDIHKFDRFVST
HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHH
QWSRNIIRAKGVCYFSNNRDMSFLFEQAGVQKKLKEAGLWYATAPEEELIEVIRQEPGLL
HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCC
RDWDDKYGDRMQKIVFIGRHLDKEELIRELDECLE
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRVKEIPILLLTGYLGSGKTTLVNHILSNKRGIKFAVIVNDIGEVNIDADLIQKGGIVGK
CCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCC
KDESLVALQNGCICCTLKMDLVEQIDDIMKQERFDYIVIEASGVCEPAPIAQTICSISSM
CCCCEEEECCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHC
GNTYGGCRLDCIVTVVDALRLQSEFSCGNDLTCKGIDEEDIENLIIQQIEFCNVVLLNKA
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHCEEEECCH
SEVKRDELERIKQIIRTLQPAAEIIECDYADADLDKIIYTEAFDFERTATSAGWIRGIES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHCHHHHHHHHHH
ALTEEQKKEAEEHEHHHHDEEHAHHHHHEGSEVDEYGISTFVYYRRPAFDIHKFDRFVST
HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHH
QWSRNIIRAKGVCYFSNNRDMSFLFEQAGVQKKLKEAGLWYATAPEEELIEVIRQEPGLL
HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCC
RDWDDKYGDRMQKIVFIGRHLDKEELIRELDECLE
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]