| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004278
Identifier: 150004278
GI number: 150004278
Start: 2218155
End: 2219516
Strand: Direct
Name: 150004278
Synonym: BVU_1724
Alternate gene names: NA
Gene position: 2218155-2219516 (Clockwise)
Preceding gene: 150004277
Following gene: 150004279
Centisome position: 42.96
GC content: 35.39
Gene sequence:
>1362_bases ATGGTTAATATAAGATCTAAAATTTACTCTTATTTTACAAAAGGTAATGAACGTAGCGTTATCATAAAGAAAAATATCGC AGCTTCATTAGTCTTGAAATGTGTCAGTATTTTGATTTCATTGCAGGTTGTTCCTTTGACCATTGATTATATTAATCCGA CAAAATATGGAATCTGGCTGACTTTAAGTTCAATTATAGCTTGGTTGTCCTATTTTGACTTGGGGTTTGCTCATGGTTTT CGTAACCGTTTTGCAGAAGCGAAAGCGAAGGGGGATATCAGACTGGCTAAAGAATATGTCAGTACTACTTATGCTGTACT GTTTCTGTTGTTCTCTGTTATTCTATTGATAACCTTGATGGTGAACAAATACCTAAACTGGAGTAGTATATTGAATATTG ACGCGGTTTATAACGAGGAGCTTCATATCGTGTTTGGTTTGCTGGCCTGTTTTTTTTGCATCAATATTGTAGCCAGTGTT TTTACCACAATGTTGACTGCTGATCAGAAACCTGCTCTGGCTTCACTGATACAGACCGGAGGACAAGTTTTGGCCTTTGT TTGTATTTATATTTTGACGAAAAATACAACAGGAAGCTTGAGTGTATTGGCAATTGCATTTGCTGGAGTGCCGTGTCTTT TGTTAGTCTTAATTTCTTTTATCATGTTTTGTGGAGGGAGATATAAGATTGTAGCACCGTCATTGCACTATATTCGTTTT TCGTTGACTAAAAAGATTTTGGGATTGGGAGGACAGTTTTTTGTTATCATGATTTCCATGTTATTTATCTTCCAGTTCAT TAATATTATTTTGTCTAGAGTAGAGAGTCCAGAAGCTGTGACGCAATATAATATTGCTTATAAATATTTTAATGTGCTTA ATATGGTGTTTGTGATTGTTCTTACCCCATTTTGGTCGGCTTTTACGGATGCGTATGTGAAAAAAGACTATAGTTGGATG GGAGGAATAGTAAGAAAATTGGAATGTTTATGGTTACTATGTATTCCTGTCCTTATTTTGATGGTGCTATGCTCTAATTT TTTGTATCAATGGTGGGTGGGCAATTCTGTATCTGTTCCCTTTTCTTTATCCGTATGTATGGCTGTATATATTTTGTTTC AAATGGGGGGGAATGTATATATGTACCTTATTAATGGAACGGGTAAAGTACGTTTACAGTTGATGGTTTATATCATATTG GCTCTTGTGGCTTTGCCTTTGATAAATGTTTGTTGTAAGCAGTATGGTGTGAATGGAGTTTTGATTGTTCCTGTCGTAGC TTTTGCTCTGCAAGCAATTGTAGGTCGGATGCAAATTTGGAAAATCATAAAAAATAAGGCTAAAGGGATTTGGCTTGAAT AA
Upstream 100 bases:
>100_bases TGTCTATTTCTCCGGCTGCTTTGAATGGAAATTATCATAGGTGGCATATTCAGGCGGTGAAGAAAGTGTTGTGAAGTAGT AGTTAGTATAGAAAGACTAT
Downstream 100 bases:
>100_bases TTAAATTCGATTGTGTATGGAAAAACCTTTGATATCAGTTGTGACTGTTGCTTATAATGCTGTTGCTACTATTGAACAGA CCATTCTTTCTGTTATAAAT
Product: putative LPS biosynthesis related polysaccharide transporter/flippase
Products: NA
Alternate protein names: O Antigen Flippase Wzx; O-Antigen Export Protein; Flippase Wzx
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MVNIRSKIYSYFTKGNERSVIIKKNIAASLVLKCVSILISLQVVPLTIDYINPTKYGIWLTLSSIIAWLSYFDLGFAHGF RNRFAEAKAKGDIRLAKEYVSTTYAVLFLLFSVILLITLMVNKYLNWSSILNIDAVYNEELHIVFGLLACFFCINIVASV FTTMLTADQKPALASLIQTGGQVLAFVCIYILTKNTTGSLSVLAIAFAGVPCLLLVLISFIMFCGGRYKIVAPSLHYIRF SLTKKILGLGGQFFVIMISMLFIFQFINIILSRVESPEAVTQYNIAYKYFNVLNMVFVIVLTPFWSAFTDAYVKKDYSWM GGIVRKLECLWLLCIPVLILMVLCSNFLYQWWVGNSVSVPFSLSVCMAVYILFQMGGNVYMYLINGTGKVRLQLMVYIIL ALVALPLINVCCKQYGVNGVLIVPVVAFALQAIVGRMQIWKIIKNKAKGIWLE
Sequences:
>Translated_453_residues MVNIRSKIYSYFTKGNERSVIIKKNIAASLVLKCVSILISLQVVPLTIDYINPTKYGIWLTLSSIIAWLSYFDLGFAHGF RNRFAEAKAKGDIRLAKEYVSTTYAVLFLLFSVILLITLMVNKYLNWSSILNIDAVYNEELHIVFGLLACFFCINIVASV FTTMLTADQKPALASLIQTGGQVLAFVCIYILTKNTTGSLSVLAIAFAGVPCLLLVLISFIMFCGGRYKIVAPSLHYIRF SLTKKILGLGGQFFVIMISMLFIFQFINIILSRVESPEAVTQYNIAYKYFNVLNMVFVIVLTPFWSAFTDAYVKKDYSWM GGIVRKLECLWLLCIPVLILMVLCSNFLYQWWVGNSVSVPFSLSVCMAVYILFQMGGNVYMYLINGTGKVRLQLMVYIIL ALVALPLINVCCKQYGVNGVLIVPVVAFALQAIVGRMQIWKIIKNKAKGIWLE >Mature_453_residues MVNIRSKIYSYFTKGNERSVIIKKNIAASLVLKCVSILISLQVVPLTIDYINPTKYGIWLTLSSIIAWLSYFDLGFAHGF RNRFAEAKAKGDIRLAKEYVSTTYAVLFLLFSVILLITLMVNKYLNWSSILNIDAVYNEELHIVFGLLACFFCINIVASV FTTMLTADQKPALASLIQTGGQVLAFVCIYILTKNTTGSLSVLAIAFAGVPCLLLVLISFIMFCGGRYKIVAPSLHYIRF SLTKKILGLGGQFFVIMISMLFIFQFINIILSRVESPEAVTQYNIAYKYFNVLNMVFVIVLTPFWSAFTDAYVKKDYSWM GGIVRKLECLWLLCIPVLILMVLCSNFLYQWWVGNSVSVPFSLSVCMAVYILFQMGGNVYMYLINGTGKVRLQLMVYIIL ALVALPLINVCCKQYGVNGVLIVPVVAFALQAIVGRMQIWKIIKNKAKGIWLE
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50962; Mature: 50962
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNIRSKIYSYFTKGNERSVIIKKNIAASLVLKCVSILISLQVVPLTIDYINPTKYGIWL CCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHH TLSSIIAWLSYFDLGFAHGFRNRFAEAKAKGDIRLAKEYVSTTYAVLFLLFSVILLITLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNKYLNWSSILNIDAVYNEELHIVFGLLACFFCINIVASVFTTMLTADQKPALASLIQTG HHHCCCHHHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC GQVLAFVCIYILTKNTTGSLSVLAIAFAGVPCLLLVLISFIMFCGGRYKIVAPSLHYIRF HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH SLTKKILGLGGQFFVIMISMLFIFQFINIILSRVESPEAVTQYNIAYKYFNVLNMVFVIV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LTPFWSAFTDAYVKKDYSWMGGIVRKLECLWLLCIPVLILMVLCSNFLYQWWVGNSVSVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FSLSVCMAVYILFQMGGNVYMYLINGTGKVRLQLMVYIILALVALPLINVCCKQYGVNGV HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LIVPVVAFALQAIVGRMQIWKIIKNKAKGIWLE EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVNIRSKIYSYFTKGNERSVIIKKNIAASLVLKCVSILISLQVVPLTIDYINPTKYGIWL CCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHH TLSSIIAWLSYFDLGFAHGFRNRFAEAKAKGDIRLAKEYVSTTYAVLFLLFSVILLITLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNKYLNWSSILNIDAVYNEELHIVFGLLACFFCINIVASVFTTMLTADQKPALASLIQTG HHHCCCHHHHEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC GQVLAFVCIYILTKNTTGSLSVLAIAFAGVPCLLLVLISFIMFCGGRYKIVAPSLHYIRF HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH SLTKKILGLGGQFFVIMISMLFIFQFINIILSRVESPEAVTQYNIAYKYFNVLNMVFVIV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH LTPFWSAFTDAYVKKDYSWMGGIVRKLECLWLLCIPVLILMVLCSNFLYQWWVGNSVSVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FSLSVCMAVYILFQMGGNVYMYLINGTGKVRLQLMVYIILALVALPLINVCCKQYGVNGV HHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LIVPVVAFALQAIVGRMQIWKIIKNKAKGIWLE EHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA