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The map label for this gene is yhdW [H]

Identifier: 150004267

GI number: 150004267

Start: 2207498

End: 2208433

Strand: Direct

Name: yhdW [H]

Synonym: BVU_1713

Alternate gene names: 150004267

Gene position: 2207498-2208433 (Clockwise)

Preceding gene: 150004266

Following gene: 150004274

Centisome position: 42.75

GC content: 44.12

Gene sequence:

>936_bases
ATGAAGAGATTGATCATATTTACTGCTGTGTTTGGTTTGTGTACCTTTGCTTCAGCACAAACGCTTACAAAGCTAGAAGT
CTTCCGTTCTAAAGGATGCGGAGACTATGTTTGGGTAGCTTCACATCGGGCTGACGGTGTGTTCGCTCCAGAAAATTCTC
TACTGGCCCTTCAACATGCTATACAATTGGGTTGTGATATTGTCGAAACCGATGTTCATTTGACCAAAGACGGCAACATA
GTCATTATGCATGATCATTCCGTTGATAGAACGACCAATGGAGAGGGTAAGATAGCAGATCTTACATTAAAAGAAATCAA
GGAATTGAACCTACGTGACAACTGGGGGGCATCCACTGAGTGCAAGGTACCTACCCTCGAAGAATACATCCAGGTAGCTA
AGGGTAAAATCTTCTTGTACTTGGACAAGGCTGGATACGATTTGCCTGGCCATGAATCAGGATACATGGTTAAGAAACTG
CTTCATGTATTGGAGCGCACCCAGGCTTTGGAACAGACGATCTTTGTACTTGACTGGCCCTATGAAAAAGCCAAGCGGAT
TTTTGGGGATTGTCTGGAGAAAGTAATCTTTTGCCCTGTCGTTGATGACCGGATACCTGATCTTGAACAATACGTAGATG
AATATATCGACAAGCTATCACCGGTTGCCTTTCAGTTCCGATTTAAAGATTGTAACACGACGACTTATTCGCTTATCCCT
AAAGTACAGGCCTCAGGCAGCAAACTGTTCGTAGCTGCTACGTGGAACAACCATACTGCAGAACATAGCGATTATGTATC
CGTGTTTTCTCGTCCGTCAGAAGGGTGGGGGTGGCTCATTGACAAGGGGTTCAGAGTAATCGAAACTAATTTTGCTCGCG
ACCTGATTCGCTATCTCAACGTAGAAAACAGGCGTATATTTCCATCGGATGATTAG

Upstream 100 bases:

>100_bases
AAAGTTGACGCCAAACAGCATCAGCTTCTGTTCCCGATTCCTCAAAACCAAATTGATGCGAGTGCAAACAAATTGATTCA
AAATCCTGGATATTGATAAT

Downstream 100 bases:

>100_bases
GATAACAGATGTATGTCATCCTGTTTGCTGATACAGGATGTTGATACACACACTTTTCACAATGAACGTTTGACTGTTTT
GTGAAAAAGTTCATTAATGG

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKRLIIFTAVFGLCTFASAQTLTKLEVFRSKGCGDYVWVASHRADGVFAPENSLLALQHAIQLGCDIVETDVHLTKDGNI
VIMHDHSVDRTTNGEGKIADLTLKEIKELNLRDNWGASTECKVPTLEEYIQVAKGKIFLYLDKAGYDLPGHESGYMVKKL
LHVLERTQALEQTIFVLDWPYEKAKRIFGDCLEKVIFCPVVDDRIPDLEQYVDEYIDKLSPVAFQFRFKDCNTTTYSLIP
KVQASGSKLFVAATWNNHTAEHSDYVSVFSRPSEGWGWLIDKGFRVIETNFARDLIRYLNVENRRIFPSDD

Sequences:

>Translated_311_residues
MKRLIIFTAVFGLCTFASAQTLTKLEVFRSKGCGDYVWVASHRADGVFAPENSLLALQHAIQLGCDIVETDVHLTKDGNI
VIMHDHSVDRTTNGEGKIADLTLKEIKELNLRDNWGASTECKVPTLEEYIQVAKGKIFLYLDKAGYDLPGHESGYMVKKL
LHVLERTQALEQTIFVLDWPYEKAKRIFGDCLEKVIFCPVVDDRIPDLEQYVDEYIDKLSPVAFQFRFKDCNTTTYSLIP
KVQASGSKLFVAATWNNHTAEHSDYVSVFSRPSEGWGWLIDKGFRVIETNFARDLIRYLNVENRRIFPSDD
>Mature_311_residues
MKRLIIFTAVFGLCTFASAQTLTKLEVFRSKGCGDYVWVASHRADGVFAPENSLLALQHAIQLGCDIVETDVHLTKDGNI
VIMHDHSVDRTTNGEGKIADLTLKEIKELNLRDNWGASTECKVPTLEEYIQVAKGKIFLYLDKAGYDLPGHESGYMVKKL
LHVLERTQALEQTIFVLDWPYEKAKRIFGDCLEKVIFCPVVDDRIPDLEQYVDEYIDKLSPVAFQFRFKDCNTTTYSLIP
KVQASGSKLFVAATWNNHTAEHSDYVSVFSRPSEGWGWLIDKGFRVIETNFARDLIRYLNVENRRIFPSDD

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=164, Percent_Identity=31.7073170731707, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 35440; Mature: 35440

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIIFTAVFGLCTFASAQTLTKLEVFRSKGCGDYVWVASHRADGVFAPENSLLALQHA
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCHHHHHHH
IQLGCDIVETDVHLTKDGNIVIMHDHSVDRTTNGEGKIADLTLKEIKELNLRDNWGASTE
HHHCCEEEECCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCC
CKVPTLEEYIQVAKGKIFLYLDKAGYDLPGHESGYMVKKLLHVLERTQALEQTIFVLDWP
CCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECC
YEKAKRIFGDCLEKVIFCPVVDDRIPDLEQYVDEYIDKLSPVAFQFRFKDCNTTTYSLIP
HHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEE
KVQASGSKLFVAATWNNHTAEHSDYVSVFSRPSEGWGWLIDKGFRVIETNFARDLIRYLN
CEECCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEECCCCEEEEHHHHHHHHHHHC
VENRRIFPSDD
CCCCCCCCCCC
>Mature Secondary Structure
MKRLIIFTAVFGLCTFASAQTLTKLEVFRSKGCGDYVWVASHRADGVFAPENSLLALQHA
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCHHHHHHH
IQLGCDIVETDVHLTKDGNIVIMHDHSVDRTTNGEGKIADLTLKEIKELNLRDNWGASTE
HHHCCEEEECCEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCC
CKVPTLEEYIQVAKGKIFLYLDKAGYDLPGHESGYMVKKLLHVLERTQALEQTIFVLDWP
CCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECC
YEKAKRIFGDCLEKVIFCPVVDDRIPDLEQYVDEYIDKLSPVAFQFRFKDCNTTTYSLIP
HHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEE
KVQASGSKLFVAATWNNHTAEHSDYVSVFSRPSEGWGWLIDKGFRVIETNFARDLIRYLN
CEECCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEECCCCEEEEHHHHHHHHHHHC
VENRRIFPSDD
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]