| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is cusC [H]
Identifier: 150004234
GI number: 150004234
Start: 2164910
End: 2166283
Strand: Direct
Name: cusC [H]
Synonym: BVU_1675
Alternate gene names: 150004234
Gene position: 2164910-2166283 (Clockwise)
Preceding gene: 150004233
Following gene: 150004237
Centisome position: 41.93
GC content: 45.27
Gene sequence:
>1374_bases ATGAAAAAACAGATCATCACTCTGACTGTCGCAGCGCTCACACTGAGTAGCTGCGGCATATATACCCAATATAAACCTGC AACCGAAGTGCCCGATAATTTGTATGGGGAAGAGGTGGCAGTTGCTGATACCGTGGATAATATCGGCAATCTGAGCTGGC AGGAGATTTTTACAGATCCGCGGCTTCAGGAATTGATAGAGCAAGGCTTGCGGAACAATACGGATTTGCAGTCAGCACAA TGGCGTGTGAAAGAGGCGGAAGCTGCTATGCTGTCAGCCAAATTGGCTTATCTGCCTTCTTTCGCTCTGTCACCTCAGGG GACAGCAAGTAGTTTTGACAAAGGAAAAGCTGTACAAACTTATACTTTACCGGTGGCGGCAAGTTGGGAAATTGATATTT TCGGCCGCATCCGTAATGCGAAACGCCAGGCGAAAGCATTGCTGGAACAGAGCCGTGACTATAAACAGGCTGTCCGGACA CAGCTGATAGCCGGTATAGCTAATACTTACTATACCTTGCTGATGCTGGACAATCAGCTGGCCATTTCTGTCCGGACTGA AAAGTCCTGGAAAGAAACCGTAGATGCAACCCGTGCTCTGATGGAAGCCGGATTGGCAAATGAAGCTGCCGTTTCACAAA TGGAAGCTACATATTATACTATATGTACTTCAGTTCTTGATCTGAAAGAACAAATTAACCAGGTAGAAAACAGTTTGTCG TTGTTGTTGGCTGAATCTCCTCATGCTATTGAGAGAACGGGCACATGGGACAGTTCTTATATGATGAAGGAACATTTTCC GGTAGGCATCCCTGTGCAAATGCTTGCCAACCGTCCCGATGTACGCAGTGCGGAGCGTTCGTTGGAAGCAGCTTTCTATG CCACAAATCAGGCTCGTTCCGCCTTTTATCCTTCTATTGTTTTAAGTGGAAGTGCGGGATGGACTAATTCAGCAGGAAGT ATGATTGTCAATCCGGGCAAGTTCATTGCAACGGCTGTAGCTTCGTTGACCCAGCCACTGTTTAATAAAGGTGCGAACAT AGCACAGCTAAAGATAGCTAAAGCTCAGCAAGAAGAAGCCAAACTGAGTTTTCAACAGGCTTTGTTGAATGCAGGAAGTG AAGTGAACGAGGCTTTGGTGAAATATCAGACGGCCCGTGATAAATCTGTTTATTATGATAAACAAATAAATTCATTAAAT AAAGCTTTGGAAAGTACCTCTTTGCTGATGCAACATGGGAATACGACTTATCTGGAAGTTTTGACGGCTCAGCAGACTTT GCTTAATGCGGAGTTAACTCAGGTTGCTAACCGTTTTACTGAAATGCAAGGCGTAATCAATCTCTATCAGGCATTGGGTG GAGGTCGTGACTAA
Upstream 100 bases:
>100_bases TTCAGTTTCAGCCGGCGGCCGATTGGCAGATTCAAGAGGAATGTGTAGAAGCAAAAGAAGAGAGACAACACCACATCGAA AGCAAAAACGAAGAGAAAAA
Downstream 100 bases:
>100_bases TTTAGCATACTGTTATCTTCAACGTGTTGAAGAAAGAGAACGCTGCTCTCCGTGAGGAAAGCAGCGTTCTTTTATGGTTG TCAAGGTTCCACTATAACAC
Product: putative transport related, lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MKKQIITLTVAALTLSSCGIYTQYKPATEVPDNLYGEEVAVADTVDNIGNLSWQEIFTDPRLQELIEQGLRNNTDLQSAQ WRVKEAEAAMLSAKLAYLPSFALSPQGTASSFDKGKAVQTYTLPVAASWEIDIFGRIRNAKRQAKALLEQSRDYKQAVRT QLIAGIANTYYTLLMLDNQLAISVRTEKSWKETVDATRALMEAGLANEAAVSQMEATYYTICTSVLDLKEQINQVENSLS LLLAESPHAIERTGTWDSSYMMKEHFPVGIPVQMLANRPDVRSAERSLEAAFYATNQARSAFYPSIVLSGSAGWTNSAGS MIVNPGKFIATAVASLTQPLFNKGANIAQLKIAKAQQEEAKLSFQQALLNAGSEVNEALVKYQTARDKSVYYDKQINSLN KALESTSLLMQHGNTTYLEVLTAQQTLLNAELTQVANRFTEMQGVINLYQALGGGRD
Sequences:
>Translated_457_residues MKKQIITLTVAALTLSSCGIYTQYKPATEVPDNLYGEEVAVADTVDNIGNLSWQEIFTDPRLQELIEQGLRNNTDLQSAQ WRVKEAEAAMLSAKLAYLPSFALSPQGTASSFDKGKAVQTYTLPVAASWEIDIFGRIRNAKRQAKALLEQSRDYKQAVRT QLIAGIANTYYTLLMLDNQLAISVRTEKSWKETVDATRALMEAGLANEAAVSQMEATYYTICTSVLDLKEQINQVENSLS LLLAESPHAIERTGTWDSSYMMKEHFPVGIPVQMLANRPDVRSAERSLEAAFYATNQARSAFYPSIVLSGSAGWTNSAGS MIVNPGKFIATAVASLTQPLFNKGANIAQLKIAKAQQEEAKLSFQQALLNAGSEVNEALVKYQTARDKSVYYDKQINSLN KALESTSLLMQHGNTTYLEVLTAQQTLLNAELTQVANRFTEMQGVINLYQALGGGRD >Mature_457_residues MKKQIITLTVAALTLSSCGIYTQYKPATEVPDNLYGEEVAVADTVDNIGNLSWQEIFTDPRLQELIEQGLRNNTDLQSAQ WRVKEAEAAMLSAKLAYLPSFALSPQGTASSFDKGKAVQTYTLPVAASWEIDIFGRIRNAKRQAKALLEQSRDYKQAVRT QLIAGIANTYYTLLMLDNQLAISVRTEKSWKETVDATRALMEAGLANEAAVSQMEATYYTICTSVLDLKEQINQVENSLS LLLAESPHAIERTGTWDSSYMMKEHFPVGIPVQMLANRPDVRSAERSLEAAFYATNQARSAFYPSIVLSGSAGWTNSAGS MIVNPGKFIATAVASLTQPLFNKGANIAQLKIAKAQQEEAKLSFQQALLNAGSEVNEALVKYQTARDKSVYYDKQINSLN KALESTSLLMQHGNTTYLEVLTAQQTLLNAELTQVANRFTEMQGVINLYQALGGGRD
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI1786785, Length=452, Percent_Identity=28.9823008849558, Blast_Score=181, Evalue=7e-47, Organism=Escherichia coli, GI2367348, Length=478, Percent_Identity=21.7573221757322, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 50272; Mature: 50272
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQIITLTVAALTLSSCGIYTQYKPATEVPDNLYGEEVAVADTVDNIGNLSWQEIFTDP CCCEEEEHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEHHHHHHHCCCCHHHHHCCH RLQELIEQGLRNNTDLQSAQWRVKEAEAAMLSAKLAYLPSFALSPQGTASSFDKGKAVQT HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE YTLPVAASWEIDIFGRIRNAKRQAKALLEQSRDYKQAVRTQLIAGIANTYYTLLMLDNQL EEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCE AISVRTEKSWKETVDATRALMEAGLANEAAVSQMEATYYTICTSVLDLKEQINQVENSLS EEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLAESPHAIERTGTWDSSYMMKEHFPVGIPVQMLANRPDVRSAERSLEAAFYATNQARS EEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHH AFYPSIVLSGSAGWTNSAGSMIVNPGKFIATAVASLTQPLFNKGANIAQLKIAKAQQEEA HCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHH KLSFQQALLNAGSEVNEALVKYQTARDKSVYYDKQINSLNKALESTSLLMQHGNTTYLEV HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH LTAQQTLLNAELTQVANRFTEMQGVINLYQALGGGRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKQIITLTVAALTLSSCGIYTQYKPATEVPDNLYGEEVAVADTVDNIGNLSWQEIFTDP CCCEEEEHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEHHHHHHHCCCCHHHHHCCH RLQELIEQGLRNNTDLQSAQWRVKEAEAAMLSAKLAYLPSFALSPQGTASSFDKGKAVQT HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEE YTLPVAASWEIDIFGRIRNAKRQAKALLEQSRDYKQAVRTQLIAGIANTYYTLLMLDNQL EEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCE AISVRTEKSWKETVDATRALMEAGLANEAAVSQMEATYYTICTSVLDLKEQINQVENSLS EEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLAESPHAIERTGTWDSSYMMKEHFPVGIPVQMLANRPDVRSAERSLEAAFYATNQARS EEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHH AFYPSIVLSGSAGWTNSAGSMIVNPGKFIATAVASLTQPLFNKGANIAQLKIAKAQQEEA HCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHH KLSFQQALLNAGSEVNEALVKYQTARDKSVYYDKQINSLNKALESTSLLMQHGNTTYLEV HHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH LTAQQTLLNAELTQVANRFTEMQGVINLYQALGGGRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]