| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is sacC [H]
Identifier: 150004222
GI number: 150004222
Start: 2148324
End: 2150300
Strand: Direct
Name: sacC [H]
Synonym: BVU_1663
Alternate gene names: 150004222
Gene position: 2148324-2150300 (Clockwise)
Preceding gene: 150004221
Following gene: 150004223
Centisome position: 41.61
GC content: 44.31
Gene sequence:
>1977_bases ATGAAACAAATGTTTCAGCCGGTAAGGCAGGTTTCCGTTAACTTTGCCGATAACGAAAAACAATCAAACAAAACTTTTAA TATCCTATACTTCATGAAAACAAATCTTGTTAACCTTGCATTAGGTTTAGCCTTTACAGGAGGCGCTGTTTCTTGTCAGT CACAAAAAAATGACCTGGTTTTCGAACATCAGGGAGATACGGTGACAATCGTACATATTGTCCGTCCCGCTAAATATTTG TTGCTTCCGATTCAGGAGAGCAGCAAGGAAGGACTGGTAAGGCTGGATACTGGGAGCCCCGCAGATACCGATATGGATGT GCGTCTGGCTACAGACAGCGTTGAATATTATGTTCCGTTTGCCTTGCCTCAGGGAAGTGAGGAAGCTACTGTCATTATAA AGAAGGTGGAGGCAGATGCGCTGTGTTGGGACAGCATCCGGGTTTCGGATACATTTGATACGGCAAACAGGGATAAGTTC CGTCCGGTTTATCATCACACTCCGCTTTATGGCTGGATGAATGATGCCAACGGACTGGTTTATAAAGACGGTGAATATCA CCTTTATTTTCAATATAATCCATACGGCTCCGTATGGGGAAATATGCACTGGGGACATTCCGTGAGCAAGGATTTGGTTC ATTGGGAGCATCTTGACCCAGCGATTGCCCGTGATACATTGGGGCATATCTTTTCGGGAAGTGCCATTGTGGATAAACAT AACAGCGCAGGCTACGGTGAAAATACAATTGTCGCTTTTTATACTTCGCACCGTAATATACCCAGTGGGCAGAGCCAGGT GCAAAGTATGGCATACAGTACGGACAACGGGCGTACTTATACGAAGTATGAACAGAATCCGGTTCTTACTCCGTTTGACG GACTACAGAATTTCCGTGACCCGAAGGTCTTTTGGTATGAACCCGAACAGAAATGGATTATGATTGTCAGTGCGGATAAG AATATGCGTTTTTATTCATCTGCCAACTTGAAGCAATGGGAATACATGAGTGAGTTTGGAGAAGGATTTGGCCCTCAGCC CAATCAGTTCGAATGTCCGGATTTCATCCAACTGCCTGTAGATGGTGACCGGACCAGGATGAAATGGGTGATGATTGTCA ATATCAATCCGGGATTTGTCTATGGAGGCAGCGGTACGATGTATTTTACAGGCGACTTTGACGGGCATCAGTTTGTATGT GATACGAAACCCGAGGTGGTGAAATGGCTCGACTGGGGAAAAGACCATTATGCCACTGTTTGTTTCTCGAATACCGGCGA CCGTGTCATTGCCGTACCTTGGATGAGCAACTGGCAGTATGCTAACTATACTCCTATACAACAGTTCCGCAGTGCCAATG CTTTGCCGCGTGAGCTGAGTCTGTATACGGGAGAAGACAAACAGCTTTATCTGAGTGCCGCACCGGTAAAGGAAACGGAG CACTTGCGGAAAGATTCTAAAAAGCTGGATGATTTTACAGTAAATGGCGAGAAGCGTTTAGAAACACTTTTTGAAAATAA CGACGGCGCTTTTGAACTGGAATTGCAACTGGTGTCGGCTGGTAAAGAGGCTGGTTTTGAATTGCTGAACAGTTTGGGTG AGAAGGTGAAGATTTATTTGGACGCTTCGGAGGGACGTGTGGTAATGGACCGTGCGGAAAGTGGTATTGTAGATTTTGGC AAGAAGGTAAAACCGCATGATTTGGATACCGAAGAAAGTTATGCTCGTTATAAAGAGGTTACGGTGAATTATAAAAATGA TTTTGCTTTGGGTACTTGGGCTCCGATAAACACCGCGAAGGCACATAAAATTCAAGTTTTTGTGGATAATGGAAGTGTGG AGTTGTTTGTTGACGGTGGCCGCGTTGCCATGACTAATCTGGTATTCCCGAATGAACCTTATAACTCTTTGCGTTTTTAT AGTAAAGGAGGAGAGATGAAGATTTCAAATTTCACAATATATAAGTTAGGTTTGTAA
Upstream 100 bases:
>100_bases ATCCGTCCGTTCACCGTAGAATTTGCGGCGAAAATAACATTCTGATTCAAGAGGGATTTAATTCTTCTTTATGGTGGAAA AGTAACATTTATACATAAGA
Downstream 100 bases:
>100_bases ACTAAGTATAAAGCCATGAATAGCAATAAAAATCTGTATGCCAAATTAATTCCGGTGATGCTGTGTTTCTTCGCCATGGG ATTTGTAGACCTGGTGGGGA
Product: levanase
Products: NA
Alternate protein names: Beta-D-fructofuranosidase; Exo-beta-D-fructosidase; Exo-levanase [H]
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MKQMFQPVRQVSVNFADNEKQSNKTFNILYFMKTNLVNLALGLAFTGGAVSCQSQKNDLVFEHQGDTVTIVHIVRPAKYL LLPIQESSKEGLVRLDTGSPADTDMDVRLATDSVEYYVPFALPQGSEEATVIIKKVEADALCWDSIRVSDTFDTANRDKF RPVYHHTPLYGWMNDANGLVYKDGEYHLYFQYNPYGSVWGNMHWGHSVSKDLVHWEHLDPAIARDTLGHIFSGSAIVDKH NSAGYGENTIVAFYTSHRNIPSGQSQVQSMAYSTDNGRTYTKYEQNPVLTPFDGLQNFRDPKVFWYEPEQKWIMIVSADK NMRFYSSANLKQWEYMSEFGEGFGPQPNQFECPDFIQLPVDGDRTRMKWVMIVNINPGFVYGGSGTMYFTGDFDGHQFVC DTKPEVVKWLDWGKDHYATVCFSNTGDRVIAVPWMSNWQYANYTPIQQFRSANALPRELSLYTGEDKQLYLSAAPVKETE HLRKDSKKLDDFTVNGEKRLETLFENNDGAFELELQLVSAGKEAGFELLNSLGEKVKIYLDASEGRVVMDRAESGIVDFG KKVKPHDLDTEESYARYKEVTVNYKNDFALGTWAPINTAKAHKIQVFVDNGSVELFVDGGRVAMTNLVFPNEPYNSLRFY SKGGEMKISNFTIYKLGL
Sequences:
>Translated_658_residues MKQMFQPVRQVSVNFADNEKQSNKTFNILYFMKTNLVNLALGLAFTGGAVSCQSQKNDLVFEHQGDTVTIVHIVRPAKYL LLPIQESSKEGLVRLDTGSPADTDMDVRLATDSVEYYVPFALPQGSEEATVIIKKVEADALCWDSIRVSDTFDTANRDKF RPVYHHTPLYGWMNDANGLVYKDGEYHLYFQYNPYGSVWGNMHWGHSVSKDLVHWEHLDPAIARDTLGHIFSGSAIVDKH NSAGYGENTIVAFYTSHRNIPSGQSQVQSMAYSTDNGRTYTKYEQNPVLTPFDGLQNFRDPKVFWYEPEQKWIMIVSADK NMRFYSSANLKQWEYMSEFGEGFGPQPNQFECPDFIQLPVDGDRTRMKWVMIVNINPGFVYGGSGTMYFTGDFDGHQFVC DTKPEVVKWLDWGKDHYATVCFSNTGDRVIAVPWMSNWQYANYTPIQQFRSANALPRELSLYTGEDKQLYLSAAPVKETE HLRKDSKKLDDFTVNGEKRLETLFENNDGAFELELQLVSAGKEAGFELLNSLGEKVKIYLDASEGRVVMDRAESGIVDFG KKVKPHDLDTEESYARYKEVTVNYKNDFALGTWAPINTAKAHKIQVFVDNGSVELFVDGGRVAMTNLVFPNEPYNSLRFY SKGGEMKISNFTIYKLGL >Mature_658_residues MKQMFQPVRQVSVNFADNEKQSNKTFNILYFMKTNLVNLALGLAFTGGAVSCQSQKNDLVFEHQGDTVTIVHIVRPAKYL LLPIQESSKEGLVRLDTGSPADTDMDVRLATDSVEYYVPFALPQGSEEATVIIKKVEADALCWDSIRVSDTFDTANRDKF RPVYHHTPLYGWMNDANGLVYKDGEYHLYFQYNPYGSVWGNMHWGHSVSKDLVHWEHLDPAIARDTLGHIFSGSAIVDKH NSAGYGENTIVAFYTSHRNIPSGQSQVQSMAYSTDNGRTYTKYEQNPVLTPFDGLQNFRDPKVFWYEPEQKWIMIVSADK NMRFYSSANLKQWEYMSEFGEGFGPQPNQFECPDFIQLPVDGDRTRMKWVMIVNINPGFVYGGSGTMYFTGDFDGHQFVC DTKPEVVKWLDWGKDHYATVCFSNTGDRVIAVPWMSNWQYANYTPIQQFRSANALPRELSLYTGEDKQLYLSAAPVKETE HLRKDSKKLDDFTVNGEKRLETLFENNDGAFELELQLVSAGKEAGFELLNSLGEKVKIYLDASEGRVVMDRAESGIVDFG KKVKPHDLDTEESYARYKEVTVNYKNDFALGTWAPINTAKAHKIQVFVDNGSVELFVDGGRVAMTNLVFPNEPYNSLRFY SKGGEMKISNFTIYKLGL
Specific function: Exo-fructosidase that can hydrolyze both levan and inulin, leading to the production of free fructose. Is also able to hydrolyze sucrose and to a small extent raffinose, but not melezitose, stachylose, cellobiose, maltose, and lactose [H]
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=503, Percent_Identity=36.182902584493, Blast_Score=254, Evalue=4e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR010496 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR011040 [H]
Pfam domain/function: PF06439 DUF1080; PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.80 [H]
Molecular weight: Translated: 74800; Mature: 74800
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQMFQPVRQVSVNFADNEKQSNKTFNILYFMKTNLVNLALGLAFTGGAVSCQSQKNDLV CCHHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCEEEECCCCCCEE FEHQGDTVTIVHIVRPAKYLLLPIQESSKEGLVRLDTGSPADTDMDVRLATDSVEYYVPF EEECCCEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCEEEEEEE ALPQGSEEATVIIKKVEADALCWDSIRVSDTFDTANRDKFRPVYHHTPLYGWMNDANGLV ECCCCCCCEEEEEEEECCCEEEECCEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCEE YKDGEYHLYFQYNPYGSVWGNMHWGHSVSKDLVHWEHLDPAIARDTLGHIFSGSAIVDKH EECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECC NSAGYGENTIVAFYTSHRNIPSGQSQVQSMAYSTDNGRTYTKYEQNPVLTPFDGLQNFRD CCCCCCCCEEEEEEECCCCCCCCHHHHHHHEEECCCCEEEEEECCCCCCCCHHHHHCCCC PKVFWYEPEQKWIMIVSADKNMRFYSSANLKQWEYMSEFGEGFGPQPNQFECPDFIQLPV CEEEEECCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECC DGDRTRMKWVMIVNINPGFVYGGSGTMYFTGDFDGHQFVCDTKPEVVKWLDWGKDHYATV CCCCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCEEEECCCHHHHHHHHCCCCCEEEE CFSNTGDRVIAVPWMSNWQYANYTPIQQFRSANALPRELSLYTGEDKQLYLSAAPVKETE EECCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCHHHH HLRKDSKKLDDFTVNGEKRLETLFENNDGAFELELQLVSAGKEAGFELLNSLGEKVKIYL HHHHHHHCCCCEEECCHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHCCCCEEEEEE DASEGRVVMDRAESGIVDFGKKVKPHDLDTEESYARYKEVTVNYKNDFALGTWAPINTAK ECCCCEEEEECCCCCHHHCCCCCCCCCCCCHHHHHEEEEEEEEECCCEEEECCCCCCCCC AHKIQVFVDNGSVELFVDGGRVAMTNLVFPNEPYNSLRFYSKGGEMKISNFTIYKLGL CEEEEEEEECCCEEEEECCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEECC >Mature Secondary Structure MKQMFQPVRQVSVNFADNEKQSNKTFNILYFMKTNLVNLALGLAFTGGAVSCQSQKNDLV CCHHHHHHHHEEEEECCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCEEEECCCCCCEE FEHQGDTVTIVHIVRPAKYLLLPIQESSKEGLVRLDTGSPADTDMDVRLATDSVEYYVPF EEECCCEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEEEEECCEEEEEEE ALPQGSEEATVIIKKVEADALCWDSIRVSDTFDTANRDKFRPVYHHTPLYGWMNDANGLV ECCCCCCCEEEEEEEECCCEEEECCEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCEE YKDGEYHLYFQYNPYGSVWGNMHWGHSVSKDLVHWEHLDPAIARDTLGHIFSGSAIVDKH EECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECC NSAGYGENTIVAFYTSHRNIPSGQSQVQSMAYSTDNGRTYTKYEQNPVLTPFDGLQNFRD CCCCCCCCEEEEEEECCCCCCCCHHHHHHHEEECCCCEEEEEECCCCCCCCHHHHHCCCC PKVFWYEPEQKWIMIVSADKNMRFYSSANLKQWEYMSEFGEGFGPQPNQFECPDFIQLPV CEEEEECCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECC DGDRTRMKWVMIVNINPGFVYGGSGTMYFTGDFDGHQFVCDTKPEVVKWLDWGKDHYATV CCCCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCEEEECCCHHHHHHHHCCCCCEEEE CFSNTGDRVIAVPWMSNWQYANYTPIQQFRSANALPRELSLYTGEDKQLYLSAAPVKETE EECCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCHHHH HLRKDSKKLDDFTVNGEKRLETLFENNDGAFELELQLVSAGKEAGFELLNSLGEKVKIYL HHHHHHHCCCCEEECCHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHCCCCEEEEEE DASEGRVVMDRAESGIVDFGKKVKPHDLDTEESYARYKEVTVNYKNDFALGTWAPINTAK ECCCCEEEEECCCCCHHHCCCCCCCCCCCCHHHHHEEEEEEEEECCCEEEECCCCCCCCC AHKIQVFVDNGSVELFVDGGRVAMTNLVFPNEPYNSLRFYSKGGEMKISNFTIYKLGL CEEEEEEEECCCEEEEECCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3112519; 3120151; 9141695; 9384377; 2117666 [H]