| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yhcG [H]
Identifier: 150004180
GI number: 150004180
Start: 2106827
End: 2107669
Strand: Direct
Name: yhcG [H]
Synonym: BVU_1621
Alternate gene names: 150004180
Gene position: 2106827-2107669 (Clockwise)
Preceding gene: 150004179
Following gene: 150004181
Centisome position: 40.8
GC content: 42.47
Gene sequence:
>843_bases ATGATGATTGAAGTAAAGAACTTGTCTTTCAGTTATGGAAAGAGAAAACAGAAAGTCTTTGATGACTTCTCGCTAGCATT GGACAAAGGTTCAGTTTACGGCCTTTTAGGGAAGAACGGTACAGGTAAATCTACTTTGCTTTATTTAATGACAGGTTTGC TTCGTCCTCAGGCCGGACGGGTGCTTTACAAAGGGGTGGATGTTTCCATGCGCTATCCCCTGACTTTGCAGGACATGTTT CTAGTGCCTGAAGAATTTGCTTTGCCATCAGTCAGTTTGAAACAATACTTGAAGCTGAATACTCCGTTTTATCCGAATTT CAGCAATGAACTCTTGAGCACTTGCCTTCGTGATTTTGATATGAATGAAGATATTCATTTGGGCGAGCTTTCGATGGGAC AGAAGAAGAAAGCATTTATGTGCTTTGCATTAGCTACCAATACCTCTTTGTTGGTAATGGACGAGCCCAGCAACGGATTG GATATTCCTTCTAAAAGTCAGTTTCGTAAAGTAATCGCTTCGGGCATGACCGATGAAAAATCAGTCATCATCTCTACGCA CCAGGTGAGAGATATTGACAGCCTGCTGGATCATGTGGTTATTATTGACGGTACCCGCGTATTGTTGAATGCATCGGTAA AGACCATCTGTGACAAAGTCTATTTTGCAGAGCAAGGCATGAATGAACCGACGGACACAGCACTCTATGTCCAGCCGTCC GTCCAGGGAAACAGTGTCATCTTCCCGAACACTGAGAATGAGGAAACGAATTTGAATCTGGAAGTATTATTCAACGCTAT GCTGGCAGAGAGAGAAAAAATGCAAACCATGTTTAACAAGTAA
Upstream 100 bases:
>100_bases TAAAGATGAGTCATTCTTCTTGTTTATTCAAATAAACTATATACATTTACAGTGTACTAATCAACTAATACACTAAATAA CTAATAAAACCATAAACACA
Downstream 100 bases:
>100_bases CACACACAAACATTATGGATACGAATAACTTCTTTAGCTTTTCGCGTATTGCAATGGTAATGAAACGCGAGATTATGGAA AATTGGAAAACGAATCTTTA
Product: putative ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MMIEVKNLSFSYGKRKQKVFDDFSLALDKGSVYGLLGKNGTGKSTLLYLMTGLLRPQAGRVLYKGVDVSMRYPLTLQDMF LVPEEFALPSVSLKQYLKLNTPFYPNFSNELLSTCLRDFDMNEDIHLGELSMGQKKKAFMCFALATNTSLLVMDEPSNGL DIPSKSQFRKVIASGMTDEKSVIISTHQVRDIDSLLDHVVIIDGTRVLLNASVKTICDKVYFAEQGMNEPTDTALYVQPS VQGNSVIFPNTENEETNLNLEVLFNAMLAEREKMQTMFNK
Sequences:
>Translated_280_residues MMIEVKNLSFSYGKRKQKVFDDFSLALDKGSVYGLLGKNGTGKSTLLYLMTGLLRPQAGRVLYKGVDVSMRYPLTLQDMF LVPEEFALPSVSLKQYLKLNTPFYPNFSNELLSTCLRDFDMNEDIHLGELSMGQKKKAFMCFALATNTSLLVMDEPSNGL DIPSKSQFRKVIASGMTDEKSVIISTHQVRDIDSLLDHVVIIDGTRVLLNASVKTICDKVYFAEQGMNEPTDTALYVQPS VQGNSVIFPNTENEETNLNLEVLFNAMLAEREKMQTMFNK >Mature_280_residues MMIEVKNLSFSYGKRKQKVFDDFSLALDKGSVYGLLGKNGTGKSTLLYLMTGLLRPQAGRVLYKGVDVSMRYPLTLQDMF LVPEEFALPSVSLKQYLKLNTPFYPNFSNELLSTCLRDFDMNEDIHLGELSMGQKKKAFMCFALATNTSLLVMDEPSNGL DIPSKSQFRKVIASGMTDEKSVIISTHQVRDIDSLLDHVVIIDGTRVLLNASVKTICDKVYFAEQGMNEPTDTALYVQPS VQGNSVIFPNTENEETNLNLEVLFNAMLAEREKMQTMFNK
Specific function: Somehow Involved In The Cytochrome D Branch Of Aerobic Respiration. Seems To Be A Component Of A Transport System. [C]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI153792144, Length=251, Percent_Identity=28.2868525896414, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI27477115, Length=218, Percent_Identity=30.2752293577982, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI27436953, Length=235, Percent_Identity=25.531914893617, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI6005701, Length=218, Percent_Identity=30.7339449541284, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI27881501, Length=214, Percent_Identity=26.1682242990654, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI30795238, Length=214, Percent_Identity=26.1682242990654, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI116734710, Length=212, Percent_Identity=26.4150943396226, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI27262624, Length=287, Percent_Identity=25.4355400696864, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI27262626, Length=287, Percent_Identity=25.4355400696864, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI171184400, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI31657092, Length=233, Percent_Identity=22.7467811158798, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI47078218, Length=212, Percent_Identity=25, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI45446740, Length=212, Percent_Identity=25, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI105990541, Length=218, Percent_Identity=24.3119266055046, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1787112, Length=218, Percent_Identity=29.3577981651376, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790739, Length=227, Percent_Identity=27.3127753303965, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87081791, Length=169, Percent_Identity=32.5443786982249, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87081782, Length=192, Percent_Identity=28.125, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=25, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786319, Length=228, Percent_Identity=25.4385964912281, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788165, Length=163, Percent_Identity=30.6748466257669, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994943, Length=226, Percent_Identity=23.4513274336283, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1789593, Length=237, Percent_Identity=25.7383966244726, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788210, Length=212, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87081709, Length=176, Percent_Identity=27.8409090909091, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789991, Length=228, Percent_Identity=23.2456140350877, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=25.4545454545455, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1790190, Length=214, Percent_Identity=23.3644859813084, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1786398, Length=235, Percent_Identity=25.9574468085106, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788540, Length=208, Percent_Identity=27.4038461538462, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788450, Length=217, Percent_Identity=23.963133640553, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789032, Length=240, Percent_Identity=22.9166666666667, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786253, Length=214, Percent_Identity=24.2990654205607, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1789751, Length=217, Percent_Identity=26.2672811059908, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI87082064, Length=192, Percent_Identity=27.6041666666667, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1789586, Length=234, Percent_Identity=24.3589743589744, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787792, Length=216, Percent_Identity=24.0740740740741, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI87081834, Length=176, Percent_Identity=27.2727272727273, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71983510, Length=218, Percent_Identity=26.605504587156, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71983523, Length=218, Percent_Identity=26.605504587156, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71983516, Length=218, Percent_Identity=26.605504587156, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17565586, Length=220, Percent_Identity=27.7272727272727, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71992290, Length=219, Percent_Identity=26.4840182648402, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533608, Length=218, Percent_Identity=26.605504587156, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17510237, Length=203, Percent_Identity=25.1231527093596, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17533971, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115533592, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71984940, Length=215, Percent_Identity=26.5116279069767, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193208177, Length=216, Percent_Identity=26.3888888888889, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17569081, Length=215, Percent_Identity=24.6511627906977, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI115534520, Length=220, Percent_Identity=25, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007184, Length=254, Percent_Identity=25.9842519685039, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI221500365, Length=254, Percent_Identity=25.9842519685039, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=26.7942583732057, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI221512771, Length=209, Percent_Identity=25.8373205741627, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI23397593, Length=217, Percent_Identity=26.2672811059908, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24650855, Length=198, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24650853, Length=198, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574150, Length=208, Percent_Identity=25.4807692307692, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28573573, Length=220, Percent_Identity=25, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI116007328, Length=208, Percent_Identity=25.4807692307692, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI281362751, Length=198, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI28573571, Length=215, Percent_Identity=23.7209302325581, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552361, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24583969, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552347, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552351, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552339, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552335, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552337, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552341, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552359, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45550972, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552353, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552343, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552363, Length=230, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552357, Length=230, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI45552355, Length=230, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI45552345, Length=230, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=8e-11, Organism=Drosophila melanogaster, GI45552349, Length=230, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 31462; Mature: 31462
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIEVKNLSFSYGKRKQKVFDDFSLALDKGSVYGLLGKNGTGKSTLLYLMTGLLRPQAGR CEEEEECCCCCCCCHHHHHHHHHHEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCE VLYKGVDVSMRYPLTLQDMFLVPEEFALPSVSLKQYLKLNTPFYPNFSNELLSTCLRDFD EEEECCCEEEECCCCHHHHEECCHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC MNEDIHLGELSMGQKKKAFMCFALATNTSLLVMDEPSNGLDIPSKSQFRKVIASGMTDEK CCCCEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC SVIISTHQVRDIDSLLDHVVIIDGTRVLLNASVKTICDKVYFAEQGMNEPTDTALYVQPS EEEEEHHHHHHHHHHHCEEEEECCCEEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEECC VQGNSVIFPNTENEETNLNLEVLFNAMLAEREKMQTMFNK CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMIEVKNLSFSYGKRKQKVFDDFSLALDKGSVYGLLGKNGTGKSTLLYLMTGLLRPQAGR CEEEEECCCCCCCCHHHHHHHHHHEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCCE VLYKGVDVSMRYPLTLQDMFLVPEEFALPSVSLKQYLKLNTPFYPNFSNELLSTCLRDFD EEEECCCEEEECCCCHHHHEECCHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC MNEDIHLGELSMGQKKKAFMCFALATNTSLLVMDEPSNGLDIPSKSQFRKVIASGMTDEK CCCCEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC SVIISTHQVRDIDSLLDHVVIIDGTRVLLNASVKTICDKVYFAEQGMNEPTDTALYVQPS EEEEEHHHHHHHHHHHCEEEEECCCEEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEECC VQGNSVIFPNTENEETNLNLEVLFNAMLAEREKMQTMFNK CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]