| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004161
Identifier: 150004161
GI number: 150004161
Start: 2078041
End: 2079246
Strand: Reverse
Name: 150004161
Synonym: BVU_1596
Alternate gene names: NA
Gene position: 2079246-2078041 (Counterclockwise)
Preceding gene: 150004164
Following gene: 150004157
Centisome position: 40.27
GC content: 43.62
Gene sequence:
>1206_bases ATGGCTAAAGTACAAATAAAATTCGATTCAATCACACCTTTTGGCGGAATATTTTCAATCATGGAGCAATTTGATGCTCT TTTATCGGACGTAATCGACTCCACATTAGGACTGCGTAGCAGAACCTATGGTTACCAATACAGTGAAATCATCCGTTCTC TCATGTGCGTATTCTTCTGTGGCGGCTCGTGCATTGAAGACATATCCACTCATCTCATGCCCCATCTTTCCCTGCATCCC AAACTTAAAACCTGCAGCGCAGACACGATTCTTCGCGCCATAAAAGAACTGACTACAGACAACATAACGTATTCATCTCC AGACTCAGGTAAATCATATGACTTCAATACAGCTGACACAATGAACGAATTGTTGGTCAAGTCTCTCATTGCTACCGGAG AATTATGTCAGGAGCAGGGTTACGATCTGGATTTTGACCACCAGTTCATTGAAACGGAGAAGTATGATGCCAAACGTACA TACAAGAAGTTCACAGGATACAGCCCGGGAGTGGCCGTTATAGGTGACCATATTGTCGGCATTGAAAATCGGGATGGCAA CACGAATGTCCGGTTCTGCCAGCAGTGTACATTGGAAAGAATCTTCACCAGGCTGGAATGTAACGGCATTCATATAAATA GAGCTCGTATGGATTGTGGGTCGTGCTCCGAAGAGATTGTAGATACCGTCAAGGCCCATTGCAAGTACTTCTATATCAGA GCCAACAGATGCTCCGCTTTTTACGATGACATGTTCGCCCTCAGGGGATGGAAGGCTGAGGAGATCAACGGAATCAGGTT CGAGCTGAATTCGATTGTCGTAGAAAAGTGGAAGGGGAAACCATACCGTCTTGTCATCCAAAGACAAAGAAGAACAGATG ACATACGGGAGCTATGGGAAGGAGAATATACCTACCGGTGTATCCTTACCAATGATTTCGAATCCGACATAAGGGATGTC GTAGAGTTCTATAACCTGTGCGGTGGGAAGGAAAGAATCCTCGATGACATGAACAACGGGTTTGGATGGAAACATTTGCC AAAGTCATTCATGGCAGAAAATGCAGTATACCTGCTGATGACTGCATTGATAAGGAACTTCTACAAAACAATCATCCGAA AATTAAACGTTAAGGATTTTGGCCTATCCATATCGAGTCGTATTAAGACTTTCGTTTTCAAATCATTGCTGTCCGCTAAA GTTTAG
Upstream 100 bases:
>100_bases TTAAAGCACTGAGTAGTAATGTATTACCCAGTGCTTTGTCATGTCAGAAGATTCACTTAACTTCGTGTTGCAATAAAAAT CAAACCAATCTTCAGCAGAC
Downstream 100 bases:
>100_bases TGTAGTACGATTCGCCTACCCGCAGTGTCACTTGATAGGCATTGCGGGTGTTTGTTTTGTCTGGTAAGCCCCTCTATCCA AAGAGCAGGAGTTCCTTGGG
Product: transposase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MAKVQIKFDSITPFGGIFSIMEQFDALLSDVIDSTLGLRSRTYGYQYSEIIRSLMCVFFCGGSCIEDISTHLMPHLSLHP KLKTCSADTILRAIKELTTDNITYSSPDSGKSYDFNTADTMNELLVKSLIATGELCQEQGYDLDFDHQFIETEKYDAKRT YKKFTGYSPGVAVIGDHIVGIENRDGNTNVRFCQQCTLERIFTRLECNGIHINRARMDCGSCSEEIVDTVKAHCKYFYIR ANRCSAFYDDMFALRGWKAEEINGIRFELNSIVVEKWKGKPYRLVIQRQRRTDDIRELWEGEYTYRCILTNDFESDIRDV VEFYNLCGGKERILDDMNNGFGWKHLPKSFMAENAVYLLMTALIRNFYKTIIRKLNVKDFGLSISSRIKTFVFKSLLSAK V
Sequences:
>Translated_401_residues MAKVQIKFDSITPFGGIFSIMEQFDALLSDVIDSTLGLRSRTYGYQYSEIIRSLMCVFFCGGSCIEDISTHLMPHLSLHP KLKTCSADTILRAIKELTTDNITYSSPDSGKSYDFNTADTMNELLVKSLIATGELCQEQGYDLDFDHQFIETEKYDAKRT YKKFTGYSPGVAVIGDHIVGIENRDGNTNVRFCQQCTLERIFTRLECNGIHINRARMDCGSCSEEIVDTVKAHCKYFYIR ANRCSAFYDDMFALRGWKAEEINGIRFELNSIVVEKWKGKPYRLVIQRQRRTDDIRELWEGEYTYRCILTNDFESDIRDV VEFYNLCGGKERILDDMNNGFGWKHLPKSFMAENAVYLLMTALIRNFYKTIIRKLNVKDFGLSISSRIKTFVFKSLLSAK V >Mature_400_residues AKVQIKFDSITPFGGIFSIMEQFDALLSDVIDSTLGLRSRTYGYQYSEIIRSLMCVFFCGGSCIEDISTHLMPHLSLHPK LKTCSADTILRAIKELTTDNITYSSPDSGKSYDFNTADTMNELLVKSLIATGELCQEQGYDLDFDHQFIETEKYDAKRTY KKFTGYSPGVAVIGDHIVGIENRDGNTNVRFCQQCTLERIFTRLECNGIHINRARMDCGSCSEEIVDTVKAHCKYFYIRA NRCSAFYDDMFALRGWKAEEINGIRFELNSIVVEKWKGKPYRLVIQRQRRTDDIRELWEGEYTYRCILTNDFESDIRDVV EFYNLCGGKERILDDMNNGFGWKHLPKSFMAENAVYLLMTALIRNFYKTIIRKLNVKDFGLSISSRIKTFVFKSLLSAKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46194; Mature: 46063
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVQIKFDSITPFGGIFSIMEQFDALLSDVIDSTLGLRSRTYGYQYSEIIRSLMCVFFC CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHH GGSCIEDISTHLMPHLSLHPKLKTCSADTILRAIKELTTDNITYSSPDSGKSYDFNTADT CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHH MNELLVKSLIATGELCQEQGYDLDFDHQFIETEKYDAKRTYKKFTGYSPGVAVIGDHIVG HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEECCEEEE IENRDGNTNVRFCQQCTLERIFTRLECNGIHINRARMDCGSCSEEIVDTVKAHCKYFYIR EECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHEEEEEE ANRCSAFYDDMFALRGWKAEEINGIRFELNSIVVEKWKGKPYRLVIQRQRRTDDIRELWE CCCHHHHHHHHHHHCCCCHHHCCCEEEEHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHC GEYTYRCILTNDFESDIRDVVEFYNLCGGKERILDDMNNGFGWKHLPKSFMAENAVYLLM CCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHH TALIRNFYKTIIRKLNVKDFGLSISSRIKTFVFKSLLSAKV HHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKVQIKFDSITPFGGIFSIMEQFDALLSDVIDSTLGLRSRTYGYQYSEIIRSLMCVFFC CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHH GGSCIEDISTHLMPHLSLHPKLKTCSADTILRAIKELTTDNITYSSPDSGKSYDFNTADT CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHH MNELLVKSLIATGELCQEQGYDLDFDHQFIETEKYDAKRTYKKFTGYSPGVAVIGDHIVG HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEECCEEEE IENRDGNTNVRFCQQCTLERIFTRLECNGIHINRARMDCGSCSEEIVDTVKAHCKYFYIR EECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHEEEEEE ANRCSAFYDDMFALRGWKAEEINGIRFELNSIVVEKWKGKPYRLVIQRQRRTDDIRELWE CCCHHHHHHHHHHHCCCCHHHCCCEEEEHHHHHHHHCCCCCEEEEHHHHHCCHHHHHHHC GEYTYRCILTNDFESDIRDVVEFYNLCGGKERILDDMNNGFGWKHLPKSFMAENAVYLLM CCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHH TALIRNFYKTIIRKLNVKDFGLSISSRIKTFVFKSLLSAKV HHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA