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The map label for this gene is capD [H]

Identifier: 150004104

GI number: 150004104

Start: 2027672

End: 2028745

Strand: Direct

Name: capD [H]

Synonym: BVU_1539

Alternate gene names: 150004104

Gene position: 2027672-2028745 (Clockwise)

Preceding gene: 150004103

Following gene: 150004105

Centisome position: 39.27

GC content: 45.07

Gene sequence:

>1074_bases
ATGTCAGTATTCAAAGACAAAGTCCTGTTAATTACAGGCGGTACGGGTTCCTTTGGGAATGCTGTGCTACGTCGTTTTCT
TGACAGCGACATCAAGGAAATCAGAATTTTCAGTCGTGATGAGAAGAAGCAGGACGATATGCGTCACCGCTTGCAGAATT
CTAAGGTGAAGTTCTATATCGGTAATGTCCGCAACAAGACTTCTGTAGATATTGCTATGCGTGGTGTTGACTACGTTTTT
GCCGCCGCCGCTCTCAAGCAGGTGCCGAGTTGTGAGTTTTTCCCTATGGAGGCTACTCGCACTAATGTTCTCGGTACTGG
AAACGTTCTTCTTTCTGCTATCGAGCATGGGGTAAAAAATGTTGTGGTCCTTTCTACTGATAAGGCAGCTTATCCTATCA
ATGCTATGGGTATCAGCAAAGCACTTATGGAGAAGGTTGCGATTGCTAAGGGTCGTGAACTTGGCGAGGGTGCGGCTACT
ACCATTTGTTGTACTCGTTATGGTAACGTTATGGCAAGCCGCGGTTCTGTTATCCCTTTGTGGGTTGAGCAGATGATAGA
GGGTAATCCTATTACTATCACTGATCCGAATATGACCCGCTTTATGATGACTCTTGATGATGCTGTTGACTTGGTTATAT
ACGCGTTTACCCATGGTCATAATGGTGATCTTTTTGTCCAAAAGGCTCCTGCCGCTACTTTGGAGACTCTTGCTACCGCA
CTGAAGGAAATATATTCTAAGGTTGATCCGAAATATGGAGATACTGAGGTTCGCGTTATTGGTACTCGCCACGGTGAGAA
ACTTTATGAGACTCTTGTCACTCGCGAGGAGATGGCTAAGGCTATTGATATGGGCAATTATTACCGTATTCCTTGTGATA
ACCGTGACTTAAATTATGACAAGTTCTTCTCTGAGGGTGATGAGGTGGTTTCTCGTATTGAGGATTATCATAGCCACAAT
ACTCAGCGCCTTGATGTTGAGGGTATGAAGAAGCAGTTGATGCGTCTGCGCTTTATTCAGGAGGATTTGGGCTTGATTGA
GAAGGCAAAGGCGCGCGAAATCCGTTCCGAATAG

Upstream 100 bases:

>100_bases
TAGCTGTTGCTAAAAAAGGGAAAATGCTAATAGAGCAATCGTATTCTCATATATCTGCTGGAGAAAAGATGCATAAATTT
TTAAAATCATTATAAATAGT

Downstream 100 bases:

>100_bases
CCGGTGTGTGAAAACCGGCAATCTACTGCGTTGCCATCGACTTCGCAAAGTATTTTTTTGGGGGGGGGAACAATTATTCA
AAGTGTTCCCGCTATTGAGA

Product: putative dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSVFKDKVLLITGGTGSFGNAVLRRFLDSDIKEIRIFSRDEKKQDDMRHRLQNSKVKFYIGNVRNKTSVDIAMRGVDYVF
AAAALKQVPSCEFFPMEATRTNVLGTGNVLLSAIEHGVKNVVVLSTDKAAYPINAMGISKALMEKVAIAKGRELGEGAAT
TICCTRYGNVMASRGSVIPLWVEQMIEGNPITITDPNMTRFMMTLDDAVDLVIYAFTHGHNGDLFVQKAPAATLETLATA
LKEIYSKVDPKYGDTEVRVIGTRHGEKLYETLVTREEMAKAIDMGNYYRIPCDNRDLNYDKFFSEGDEVVSRIEDYHSHN
TQRLDVEGMKKQLMRLRFIQEDLGLIEKAKAREIRSE

Sequences:

>Translated_357_residues
MSVFKDKVLLITGGTGSFGNAVLRRFLDSDIKEIRIFSRDEKKQDDMRHRLQNSKVKFYIGNVRNKTSVDIAMRGVDYVF
AAAALKQVPSCEFFPMEATRTNVLGTGNVLLSAIEHGVKNVVVLSTDKAAYPINAMGISKALMEKVAIAKGRELGEGAAT
TICCTRYGNVMASRGSVIPLWVEQMIEGNPITITDPNMTRFMMTLDDAVDLVIYAFTHGHNGDLFVQKAPAATLETLATA
LKEIYSKVDPKYGDTEVRVIGTRHGEKLYETLVTREEMAKAIDMGNYYRIPCDNRDLNYDKFFSEGDEVVSRIEDYHSHN
TQRLDVEGMKKQLMRLRFIQEDLGLIEKAKAREIRSE
>Mature_356_residues
SVFKDKVLLITGGTGSFGNAVLRRFLDSDIKEIRIFSRDEKKQDDMRHRLQNSKVKFYIGNVRNKTSVDIAMRGVDYVFA
AAALKQVPSCEFFPMEATRTNVLGTGNVLLSAIEHGVKNVVVLSTDKAAYPINAMGISKALMEKVAIAKGRELGEGAATT
ICCTRYGNVMASRGSVIPLWVEQMIEGNPITITDPNMTRFMMTLDDAVDLVIYAFTHGHNGDLFVQKAPAATLETLATAL
KEIYSKVDPKYGDTEVRVIGTRHGEKLYETLVTREEMAKAIDMGNYYRIPCDNRDLNYDKFFSEGDEVVSRIEDYHSHNT
QRLDVEGMKKQLMRLRFIQEDLGLIEKAKAREIRSE

Specific function: Epimerizes UDP-galactose to UDP-glucose [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869
- InterPro:   IPR013692 [H]

Pfam domain/function: PF08485 Polysacc_syn_2C; PF02719 Polysacc_synt_2 [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 40100; Mature: 39968

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFKDKVLLITGGTGSFGNAVLRRFLDSDIKEIRIFSRDEKKQDDMRHRLQNSKVKFYI
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEE
GNVRNKTSVDIAMRGVDYVFAAAALKQVPSCEFFPMEATRTNVLGTGNVLLSAIEHGVKN
CCCCCCCCHHHEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCE
VVVLSTDKAAYPINAMGISKALMEKVAIAKGRELGEGAATTICCTRYGNVMASRGSVIPL
EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEEEHHHHCCHHHCCCCEEHH
WVEQMIEGNPITITDPNMTRFMMTLDDAVDLVIYAFTHGHNGDLFVQKAPAATLETLATA
HHHHHHCCCCEEEECCCHHEEEEHHHHHHEEEEEEEECCCCCCEEEECCCHHHHHHHHHH
LKEIYSKVDPKYGDTEVRVIGTRHGEKLYETLVTREEMAKAIDMGNYYRIPCDNRDLNYD
HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHH
KFFSEGDEVVSRIEDYHSHNTQRLDVEGMKKQLMRLRFIQEDLGLIEKAKAREIRSE
HHHCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVFKDKVLLITGGTGSFGNAVLRRFLDSDIKEIRIFSRDEKKQDDMRHRLQNSKVKFYI
CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEE
GNVRNKTSVDIAMRGVDYVFAAAALKQVPSCEFFPMEATRTNVLGTGNVLLSAIEHGVKN
CCCCCCCCHHHEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCE
VVVLSTDKAAYPINAMGISKALMEKVAIAKGRELGEGAATTICCTRYGNVMASRGSVIPL
EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEEEHHHHCCHHHCCCCEEHH
WVEQMIEGNPITITDPNMTRFMMTLDDAVDLVIYAFTHGHNGDLFVQKAPAATLETLATA
HHHHHHCCCCEEEECCCHHEEEEHHHHHHEEEEEEEECCCCCCEEEECCCHHHHHHHHHH
LKEIYSKVDPKYGDTEVRVIGTRHGEKLYETLVTREEMAKAIDMGNYYRIPCDNRDLNYD
HHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHH
KFFSEGDEVVSRIEDYHSHNTQRLDVEGMKKQLMRLRFIQEDLGLIEKAKAREIRSE
HHHCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA