| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150004098
Identifier: 150004098
GI number: 150004098
Start: 2021285
End: 2021851
Strand: Direct
Name: 150004098
Synonym: BVU_1533
Alternate gene names: NA
Gene position: 2021285-2021851 (Clockwise)
Preceding gene: 150004097
Following gene: 150004099
Centisome position: 39.15
GC content: 35.63
Gene sequence:
>567_bases ATGGAACGTTTAGGCGTTCGTAAGGTTTGGCTTACCCCCCATATAATGGAAGACATACCCAATGAAACAGTGGATCTGCA ACAGAAGTTCCAAGAATTAAAGCAAATGTATCATGGAAAGATCGAATTGGCTTTGGCAGCGGAATATATGATGGATAACC TTTTTGAGGAACGGTTGGAAAAGGATGACTTGTTACCCTTTGAGGAAGGAAAACATTATCTGTTAGTGGAAACCTCTTAT TTCAATCCACCAATGGGATTACTGTCTATTTTGCAACGCATCCAAAAGAAAGGTTATCATCCTTTGTTGGCCCATCCGGA ACGATATGAGTATATGCAAATGATGGATTATAAAACGTTAAAAAAGAACCAAATTTCTTTTCAATTAAATATACCGTCAT TAGTCGGAATGTATGGTAAGCACATAGAGAAGAAAGCGAAGATATTATTAAAAGCAGGAATGTATGATTTAGGAGGAAAT GATGTTCACTCCCTTATTTTTTATGTGACAACTTGTAAGCAAAAAATAGACAATCTGTCTTTCTTGAAAAATGTGTGTAA AATATAG
Upstream 100 bases:
>100_bases CGGTTTTTTCCGTGGTTTCACTGATTGCCACAGCCATCTTCTTCCCGGGGTAGATGATGGGGTGAAAACGTTGGAAGAGT CGTTGGCGATATTGGAAGAA
Downstream 100 bases:
>100_bases CGTATTTACATTCGGGAAGACTTTGCCCTAATATGTGTTTTTTTATGTAAATGAATGATTTAATATTTAATACAAAGATA AATGAAAGCATGTTTCATGG
Product: capsular polysaccharide biosythesis protein, putative
Products: NA
Alternate protein names: Capsular Polysaccharide Biosythesis Protein; Protein-Tyrosine Phosphatase; PHP Domain Protein; CpsB Protein; Protein-Tyrosine-Phosphatase; Phosphotransferase Domain-Containing Protein; PHP-Like Protein; Phosphotyrosine-Protein Phosphatase
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MERLGVRKVWLTPHIMEDIPNETVDLQQKFQELKQMYHGKIELALAAEYMMDNLFEERLEKDDLLPFEEGKHYLLVETSY FNPPMGLLSILQRIQKKGYHPLLAHPERYEYMQMMDYKTLKKNQISFQLNIPSLVGMYGKHIEKKAKILLKAGMYDLGGN DVHSLIFYVTTCKQKIDNLSFLKNVCKI
Sequences:
>Translated_188_residues MERLGVRKVWLTPHIMEDIPNETVDLQQKFQELKQMYHGKIELALAAEYMMDNLFEERLEKDDLLPFEEGKHYLLVETSY FNPPMGLLSILQRIQKKGYHPLLAHPERYEYMQMMDYKTLKKNQISFQLNIPSLVGMYGKHIEKKAKILLKAGMYDLGGN DVHSLIFYVTTCKQKIDNLSFLKNVCKI >Mature_188_residues MERLGVRKVWLTPHIMEDIPNETVDLQQKFQELKQMYHGKIELALAAEYMMDNLFEERLEKDDLLPFEEGKHYLLVETSY FNPPMGLLSILQRIQKKGYHPLLAHPERYEYMQMMDYKTLKKNQISFQLNIPSLVGMYGKHIEKKAKILLKAGMYDLGGN DVHSLIFYVTTCKQKIDNLSFLKNVCKI
Specific function: Unknown
COG id: COG4464
COG function: function code GM; Capsular polysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22146; Mature: 22146
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLGVRKVWLTPHIMEDIPNETVDLQQKFQELKQMYHGKIELALAAEYMMDNLFEERLE CCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC KDDLLPFEEGKHYLLVETSYFNPPMGLLSILQRIQKKGYHPLLAHPERYEYMQMMDYKTL CCCCCCHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH KKNQISFQLNIPSLVGMYGKHIEKKAKILLKAGMYDLGGNDVHSLIFYVTTCKQKIDNLS HCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH FLKNVCKI HHHHHHCC >Mature Secondary Structure MERLGVRKVWLTPHIMEDIPNETVDLQQKFQELKQMYHGKIELALAAEYMMDNLFEERLE CCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC KDDLLPFEEGKHYLLVETSYFNPPMGLLSILQRIQKKGYHPLLAHPERYEYMQMMDYKTL CCCCCCHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH KKNQISFQLNIPSLVGMYGKHIEKKAKILLKAGMYDLGGNDVHSLIFYVTTCKQKIDNLS HCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH FLKNVCKI HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA