| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is wza [C]
Identifier: 150004096
GI number: 150004096
Start: 2017885
End: 2018679
Strand: Direct
Name: wza [C]
Synonym: BVU_1531
Alternate gene names: 150004096
Gene position: 2017885-2018679 (Clockwise)
Preceding gene: 150004095
Following gene: 150004097
Centisome position: 39.08
GC content: 43.02
Gene sequence:
>795_bases ATGAAATTTCATTTAATTAAATTATGTTTCTTGTGTGTCTTATTGGTGTCCTGCAATACCTCCAAAGAAATTGTCTATTT TCAAGATATCGTAGTTAATCAACCCGAGGCGATTATCGGGGCACGGGATATTACCGTACAACCCAAAGACCAGATTTCCA TTATGGTGTCCAGTAAGGATCCGCAATTGGCGGCTCTGTTTAATTTGACACGGGTGCAATACCGTGCCGGATCTTCTGAT TTACGTTCTGGCAACATCAATGGAGAAATATCAGGTTACACATTGGATGATAAGGGGAACATTGATTTTCCTGTTGTCGG AACATTGCATATTGCCGGTATGACCAAGAGCCAGATTGCCACCCTGGTAAAAAAAAGGCTGATGGAAGAGAATCTGGTAA ACGATCCGGTAGTTACAGTTGAGTTTATGAACCTTTATTTCTCCGTGTTGGGCGAGGTGAAAACTCCAGGTAAATATGCC ATTACAAAAGATCAGATTACCCTTTTGGAAGCCATCAGTATGGCGGGTGACCTAAGCATCTACGGAAAGCGAGATGCGAT ATTTGTCATCCGTGAAGAAAACGGCGAGCGTGTAACCCATTGGGTGGATATCCGCTCGAAAGATCTGTTTAATTCACCGG TGTATTATCTGAAACAGAATGATGTGGTGTATGTACAGCCCAACAAGGTACGTGCCGGACAAAGCACCATTAATGAGAAC AGTGTAAAATCGGTATCGTTGTGGATCAGTATCGGTTCGCTCCTATCCTCGCTGGGTGTTTTGCTGTTCAAGTAA
Upstream 100 bases:
>100_bases TGGATGTGGCTGTTTGGACGGTGATTCATTGCTACATAACTATGAAAATCAAACGAAAACATAAAGTAGAATAATTAACT GTACAGAAAAAAAATCAGAT
Downstream 100 bases:
>100_bases TGTATTGAATTTTATTTTATAAGATATTAAAGAGAGCCAAAATGATAAAGAATAGAACGAACACAGGCAAACCTACCGAT GATTTTATACGGATACAAGA
Product: BexD/CtrA/VexA family polysaccharide export protein
Products: NA
Alternate protein names: Polysaccharide Export Protein; Polysaccharide Export Protein BexD/CtrA/VexA Family; Polysaccharide Export System Outer Membrane Protein; Polysaccharide Biosynthesis/Export Protein; Periplasmic Protein Involved In Polysaccharide Export; BexD/CtrA/VexA Family Polysaccharide Export Protein; Polysaccharide Exporter; EPS I Polysaccharide Export Outer Membrane Protein EpsA; Outer Membrane Protein Performing Polysaccharide Export; EPS Related Membrane Protein; Lipoprotein
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKFHLIKLCFLCVLLVSCNTSKEIVYFQDIVVNQPEAIIGARDITVQPKDQISIMVSSKDPQLAALFNLTRVQYRAGSSD LRSGNINGEISGYTLDDKGNIDFPVVGTLHIAGMTKSQIATLVKKRLMEENLVNDPVVTVEFMNLYFSVLGEVKTPGKYA ITKDQITLLEAISMAGDLSIYGKRDAIFVIREENGERVTHWVDIRSKDLFNSPVYYLKQNDVVYVQPNKVRAGQSTINEN SVKSVSLWISIGSLLSSLGVLLFK
Sequences:
>Translated_264_residues MKFHLIKLCFLCVLLVSCNTSKEIVYFQDIVVNQPEAIIGARDITVQPKDQISIMVSSKDPQLAALFNLTRVQYRAGSSD LRSGNINGEISGYTLDDKGNIDFPVVGTLHIAGMTKSQIATLVKKRLMEENLVNDPVVTVEFMNLYFSVLGEVKTPGKYA ITKDQITLLEAISMAGDLSIYGKRDAIFVIREENGERVTHWVDIRSKDLFNSPVYYLKQNDVVYVQPNKVRAGQSTINEN SVKSVSLWISIGSLLSSLGVLLFK >Mature_264_residues MKFHLIKLCFLCVLLVSCNTSKEIVYFQDIVVNQPEAIIGARDITVQPKDQISIMVSSKDPQLAALFNLTRVQYRAGSSD LRSGNINGEISGYTLDDKGNIDFPVVGTLHIAGMTKSQIATLVKKRLMEENLVNDPVVTVEFMNLYFSVLGEVKTPGKYA ITKDQITLLEAISMAGDLSIYGKRDAIFVIREENGERVTHWVDIRSKDLFNSPVYYLKQNDVVYVQPNKVRAGQSTINEN SVKSVSLWISIGSLLSSLGVLLFK
Specific function: Probably Involved In The Export Of The Extracellular Polysaccharide Colanic Acid From The Cell To Medium. [C]
COG id: COG1596
COG function: function code M; Periplasmic protein involved in polysaccharide export
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29398; Mature: 29398
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFHLIKLCFLCVLLVSCNTSKEIVYFQDIVVNQPEAIIGARDITVQPKDQISIMVSSKD CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECEEEEECCCCCEEEEEECCC PQLAALFNLTRVQYRAGSSDLRSGNINGEISGYTLDDKGNIDFPVVGTLHIAGMTKSQIA CCEEEHHHHHHEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCHHHHH TLVKKRLMEENLVNDPVVTVEFMNLYFSVLGEVKTPGKYAITKDQITLLEAISMAGDLSI HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCEEE YGKRDAIFVIREENGERVTHWVDIRSKDLFNSPVYYLKQNDVVYVQPNKVRAGQSTINEN EECCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCEECCCCCCCCC SVKSVSLWISIGSLLSSLGVLLFK CCEEEEEEEEHHHHHHHHHHEECC >Mature Secondary Structure MKFHLIKLCFLCVLLVSCNTSKEIVYFQDIVVNQPEAIIGARDITVQPKDQISIMVSSKD CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECEEEEECCCCCEEEEEECCC PQLAALFNLTRVQYRAGSSDLRSGNINGEISGYTLDDKGNIDFPVVGTLHIAGMTKSQIA CCEEEHHHHHHEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCHHHHH TLVKKRLMEENLVNDPVVTVEFMNLYFSVLGEVKTPGKYAITKDQITLLEAISMAGDLSI HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHCCCEEE YGKRDAIFVIREENGERVTHWVDIRSKDLFNSPVYYLKQNDVVYVQPNKVRAGQSTINEN EECCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEECCCCEECCCCCCCCC SVKSVSLWISIGSLLSSLGVLLFK CCEEEEEEEEHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA