| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004070
Identifier: 150004070
GI number: 150004070
Start: 1992589
End: 1993452
Strand: Direct
Name: 150004070
Synonym: BVU_1505
Alternate gene names: NA
Gene position: 1992589-1993452 (Clockwise)
Preceding gene: 150004067
Following gene: 150004072
Centisome position: 38.59
GC content: 43.87
Gene sequence:
>864_bases ATGAACATGCAAGAAGCAAAGAACATCAGGCTTGTTGATTTTTTAGCCGGATTCGGACATGAACCGGTAATGCAGCGTGG GAACAGCGTATGGTATAAATCGCCCTTCAGAACGGAAAAGGAGGCCTCTTTCAAGGTAGACCTCCATAAGGAACTGTGGT ATGACTTCGGACTGGGAAGGGGTGGGGATATTATAACGTTGGCCAAGGAGATTTATCGGACACAGGACATAAGCCATGTG TTACGGTGTATTGAGGATAAAAGGACGGTTTTGAAACCGGTTACTGTATCCTGCCCTTTTGAAAAAGCGTATCCCGCCTT TCAGGACTTGAAAATCACTCCTCTTGCCAACCGGATACTGCTTACCTATCTGGAGGAAAGGTGCATTGATACGGAAACGG CCCGAAAAGTATGCAAGGAGGCTCATTTTAATCGGAACGGGAAGAATTATTTTGCCATCGCTTTCCCTAATATTTCCGGA GGGTACGAAATCAGGAACAGGTATTTCAAGGCTTGTATCGCTCCCAAGGACATCACCTGTATTATTAGCACGCCGGAGAG CAGGATTTGCTATATTTTTGAGGGGTTTATAGATTTTCTGTCTTTCAGGCTGGCTTTTCCATCTTTGGAAGAGGGGGATT ATATAGTGTTGAATTCTGTCAGTAACTTACAGAAGGCTTTTTCTTTCCTTTCACGATATGACGGCATCTGTTGCTGTCTG GACAATGATACCGCCGGAAAAAATGCGGTGCAGGCATTAAAGGACAAATACGGAATCCGTATATGCGATCTTTCGCATGA ATATTCCGAATATAAGGATCTGAATGAATATCTGTGCGGGAAAAACAATCAGCTCCATATATAA
Upstream 100 bases:
>100_bases TTTTGATGCCATCTGATGACACTGTTTTGTCTGTTTCGGGTATAAAGCGGTTCTTTGTCCTATGTGTTAATCGTGAATTA ATTCATGAAAAAGATATGTC
Downstream 100 bases:
>100_bases TAGAGGTATTGAAAAGACTGTTTGATGATATATCCTTATTTTTATCCTGCCGCATGTGGCAGGAAGCAGGGTGATTTTTA ATGTGGCGATACTGTGTTAA
Product: DNA primase
Products: NA
Alternate protein names: Mobilizable Transposon Excision Protein; TraP Protein; Mobilizable Transposon Protein; TransposoN-Related/Mobilization Protein; Transposon-Related/Mobilisation Protein; Conjugal Transfer Protein TraP; Transposon-Related/Mobilization Protein; Mobilizable Transposon; Conserved Protein Found In Conjugate Transposon TraP; Mobilizable Transposon Protein Excision Protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNMQEAKNIRLVDFLAGFGHEPVMQRGNSVWYKSPFRTEKEASFKVDLHKELWYDFGLGRGGDIITLAKEIYRTQDISHV LRCIEDKRTVLKPVTVSCPFEKAYPAFQDLKITPLANRILLTYLEERCIDTETARKVCKEAHFNRNGKNYFAIAFPNISG GYEIRNRYFKACIAPKDITCIISTPESRICYIFEGFIDFLSFRLAFPSLEEGDYIVLNSVSNLQKAFSFLSRYDGICCCL DNDTAGKNAVQALKDKYGIRICDLSHEYSEYKDLNEYLCGKNNQLHI
Sequences:
>Translated_287_residues MNMQEAKNIRLVDFLAGFGHEPVMQRGNSVWYKSPFRTEKEASFKVDLHKELWYDFGLGRGGDIITLAKEIYRTQDISHV LRCIEDKRTVLKPVTVSCPFEKAYPAFQDLKITPLANRILLTYLEERCIDTETARKVCKEAHFNRNGKNYFAIAFPNISG GYEIRNRYFKACIAPKDITCIISTPESRICYIFEGFIDFLSFRLAFPSLEEGDYIVLNSVSNLQKAFSFLSRYDGICCCL DNDTAGKNAVQALKDKYGIRICDLSHEYSEYKDLNEYLCGKNNQLHI >Mature_287_residues MNMQEAKNIRLVDFLAGFGHEPVMQRGNSVWYKSPFRTEKEASFKVDLHKELWYDFGLGRGGDIITLAKEIYRTQDISHV LRCIEDKRTVLKPVTVSCPFEKAYPAFQDLKITPLANRILLTYLEERCIDTETARKVCKEAHFNRNGKNYFAIAFPNISG GYEIRNRYFKACIAPKDITCIISTPESRICYIFEGFIDFLSFRLAFPSLEEGDYIVLNSVSNLQKAFSFLSRYDGICCCL DNDTAGKNAVQALKDKYGIRICDLSHEYSEYKDLNEYLCGKNNQLHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33054; Mature: 33054
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMQEAKNIRLVDFLAGFGHEPVMQRGNSVWYKSPFRTEKEASFKVDLHKELWYDFGLGR CCCCHHCCCCHHHHHHCCCCCHHHHCCCCEEECCCCCCCCCCCEEEEHHHHHHHHCCCCC GGDIITLAKEIYRTQDISHVLRCIEDKRTVLKPVTVSCPFEKAYPAFQDLKITPLANRIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHCCCCHHCEEECHHHHHHH LTYLEERCIDTETARKVCKEAHFNRNGKNYFAIAFPNISGGYEIRNRYFKACIAPKDITC HHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE IISTPESRICYIFEGFIDFLSFRLAFPSLEEGDYIVLNSVSNLQKAFSFLSRYDGICCCL EEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEE DNDTAGKNAVQALKDKYGIRICDLSHEYSEYKDLNEYLCGKNNQLHI CCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNMQEAKNIRLVDFLAGFGHEPVMQRGNSVWYKSPFRTEKEASFKVDLHKELWYDFGLGR CCCCHHCCCCHHHHHHCCCCCHHHHCCCCEEECCCCCCCCCCCEEEEHHHHHHHHCCCCC GGDIITLAKEIYRTQDISHVLRCIEDKRTVLKPVTVSCPFEKAYPAFQDLKITPLANRIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHCCCCHHCEEECHHHHHHH LTYLEERCIDTETARKVCKEAHFNRNGKNYFAIAFPNISGGYEIRNRYFKACIAPKDITC HHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE IISTPESRICYIFEGFIDFLSFRLAFPSLEEGDYIVLNSVSNLQKAFSFLSRYDGICCCL EEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEE DNDTAGKNAVQALKDKYGIRICDLSHEYSEYKDLNEYLCGKNNQLHI CCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA