| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is gltX
Identifier: 150004040
GI number: 150004040
Start: 1954579
End: 1956096
Strand: Direct
Name: gltX
Synonym: BVU_1475
Alternate gene names: 150004040
Gene position: 1954579-1956096 (Clockwise)
Preceding gene: 150004038
Following gene: 150004041
Centisome position: 37.86
GC content: 46.38
Gene sequence:
>1518_bases ATGTCAGAAAGAAAAGTAAGAGTTCGTTTTGCTCCGAGCCCGACGGGAGCGTTGCATATCGGCGGTGTGCGCACAGCCTT GTATAACTATCTGTTTGCTCGCCAGCATGGTGGAGATTTAATTTTCCGTATAGAAGATACCGACTCAAATCGCTTTGTTC CGGGTGCGGAAGAATATATCATTGAGTCGTTTAAGTGGTTGGGGATAAACTTCGACGAAGGAGTCAGCTTTGGTGGTAAC TACGGCCCCTACCGTCAGTCTGAACGTCGTGATATTTATAAGAAATATGTACAGGTGTTGCTTGACAGCGGTAAGGCGTA TATTGCTTTCGATACTCCGGCGGAGTTGGACGCCAAACGTCAGGAAATCTCTAATTTCCAGTACGATGCTTCTACCCGTA TGTCTATGCGTAACTCTTTGACTCTGCCGAAAGAAGAAGTGGATGCACTGATTGCCGATGGGAAGCAATATGTGGTACGT TTCAAGATTGAACCGAATGAAGATGTACACGTACATGATATTATCCGTGGCGAGGTAGTGATCAATTCTTCCATTTTGGA TGATAAAGTTTTATATAAATCGGCGGATGAACTGCCTACTTATCATTTGGCAAACATTGTGGACGACCATTTGATGGAAG TTTCCCATGTAATCCGTGGTGAGGAATGGTTGCCTTCCGCTCCGTTGCATGTCCTGCTGTACCGGGCTTTCGGCTGGGCG GATACCATGCCCGAGTTCGCACATCTTCCCTTGTTGTTGAAACCGGATGGTAACGGTAAACTGAGCAAGCGTGATGGTGA CCGTCTTGGCTTCCCTGTTTTCCCGTTGGAATGGCACGACCCCAAGACCGGTGAGGTGTCTTCCGGTTATCGTGAGTCGG GTTACCTGCCCGAAGCTGTTATCAATTTCCTTGCCCTGTTGGGATGGAATCCGGGAAATGACCAGGAACTGATGTCCTTG GATGAACTGGTGAAGCTTTTTGACCTGCACCGTTGCAGCAAAGCCGGGGCAAAATTCGACTTTGAAAAAGGAAAATGGTT TAACCATGAATATATATTGAAGAAAAGCAATGAGGAAGTAGCCGGGCTTTTCATGCCGATCTTGAAAGAGCATGGCATTG AAGCTCCTATGGATAAAGTGGTGACCGTGGTAGGCTTGATGAAAGATCGTGTAAGTTTTATCAAGGATTTGTGGGAAACT TGCAAATTCTTCTTCGTCGCTCCTACGGAATATGATGAGAAGACCCGTAAAAAACGTTGGAAAGAGGACTCTCCCGAACG TATGCTGGAGTTGGCGGACGTATTGGAGGCCTTGGACGACTTCTCGCTGGAGAATCAGGAGGCTGTGGTCATGAAATGGA TAGAAGATAAAGGTTATCACTTAGGTAATATAATGAATGCTTTCCGTTTAACCTTGGTAGGCGAAGGTAAAGGTCCGCAT ATGTTTGATATTTCAGCCGTTTTAGGGAAAGAAGAAACATTGCGACGCATTCGTCGGGCTGTGGAAGTGCTCAAGTAA
Upstream 100 bases:
>100_bases TGGTCTTGAAACTTCTCATAATCGTATATTTTTGCGCGCAAAATACGAAAAAATCGGGAAATTTAGATTAATTTTGCGGC GTATTTTATATAAAACAACA
Downstream 100 bases:
>100_bases TAGCCGGTAGTTATGATTTATAACCTAGTCATCTATATTTATCTATTCGGGGTGAAGGTTGCCGGCCTGTTCAGTGCCAA GCCCGCCAAAATGGTGAAAG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSERKVRVRFAPSPTGALHIGGVRTALYNYLFARQHGGDLIFRIEDTDSNRFVPGAEEYIIESFKWLGINFDEGVSFGGN YGPYRQSERRDIYKKYVQVLLDSGKAYIAFDTPAELDAKRQEISNFQYDASTRMSMRNSLTLPKEEVDALIADGKQYVVR FKIEPNEDVHVHDIIRGEVVINSSILDDKVLYKSADELPTYHLANIVDDHLMEVSHVIRGEEWLPSAPLHVLLYRAFGWA DTMPEFAHLPLLLKPDGNGKLSKRDGDRLGFPVFPLEWHDPKTGEVSSGYRESGYLPEAVINFLALLGWNPGNDQELMSL DELVKLFDLHRCSKAGAKFDFEKGKWFNHEYILKKSNEEVAGLFMPILKEHGIEAPMDKVVTVVGLMKDRVSFIKDLWET CKFFFVAPTEYDEKTRKKRWKEDSPERMLELADVLEALDDFSLENQEAVVMKWIEDKGYHLGNIMNAFRLTLVGEGKGPH MFDISAVLGKEETLRRIRRAVEVLK
Sequences:
>Translated_505_residues MSERKVRVRFAPSPTGALHIGGVRTALYNYLFARQHGGDLIFRIEDTDSNRFVPGAEEYIIESFKWLGINFDEGVSFGGN YGPYRQSERRDIYKKYVQVLLDSGKAYIAFDTPAELDAKRQEISNFQYDASTRMSMRNSLTLPKEEVDALIADGKQYVVR FKIEPNEDVHVHDIIRGEVVINSSILDDKVLYKSADELPTYHLANIVDDHLMEVSHVIRGEEWLPSAPLHVLLYRAFGWA DTMPEFAHLPLLLKPDGNGKLSKRDGDRLGFPVFPLEWHDPKTGEVSSGYRESGYLPEAVINFLALLGWNPGNDQELMSL DELVKLFDLHRCSKAGAKFDFEKGKWFNHEYILKKSNEEVAGLFMPILKEHGIEAPMDKVVTVVGLMKDRVSFIKDLWET CKFFFVAPTEYDEKTRKKRWKEDSPERMLELADVLEALDDFSLENQEAVVMKWIEDKGYHLGNIMNAFRLTLVGEGKGPH MFDISAVLGKEETLRRIRRAVEVLK >Mature_504_residues SERKVRVRFAPSPTGALHIGGVRTALYNYLFARQHGGDLIFRIEDTDSNRFVPGAEEYIIESFKWLGINFDEGVSFGGNY GPYRQSERRDIYKKYVQVLLDSGKAYIAFDTPAELDAKRQEISNFQYDASTRMSMRNSLTLPKEEVDALIADGKQYVVRF KIEPNEDVHVHDIIRGEVVINSSILDDKVLYKSADELPTYHLANIVDDHLMEVSHVIRGEEWLPSAPLHVLLYRAFGWAD TMPEFAHLPLLLKPDGNGKLSKRDGDRLGFPVFPLEWHDPKTGEVSSGYRESGYLPEAVINFLALLGWNPGNDQELMSLD ELVKLFDLHRCSKAGAKFDFEKGKWFNHEYILKKSNEEVAGLFMPILKEHGIEAPMDKVVTVVGLMKDRVSFIKDLWETC KFFFVAPTEYDEKTRKKRWKEDSPERMLELADVLEALDDFSLENQEAVVMKWIEDKGYHLGNIMNAFRLTLVGEGKGPHM FDISAVLGKEETLRRIRRAVEVLK
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=518, Percent_Identity=34.9420849420849, Blast_Score=249, Evalue=3e-66, Organism=Escherichia coli, GI1788743, Length=505, Percent_Identity=32.0792079207921, Blast_Score=260, Evalue=2e-70, Organism=Escherichia coli, GI226510925, Length=265, Percent_Identity=31.6981132075472, Blast_Score=114, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71993394, Length=516, Percent_Identity=35.4651162790698, Blast_Score=265, Evalue=4e-71, Organism=Saccharomyces cerevisiae, GI6324540, Length=522, Percent_Identity=36.3984674329502, Blast_Score=290, Evalue=5e-79, Organism=Saccharomyces cerevisiae, GI6321192, Length=311, Percent_Identity=26.6881028938907, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24665321, Length=519, Percent_Identity=35.4527938342967, Blast_Score=296, Evalue=2e-80,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_BACV8 (A6L0E8)
Other databases:
- EMBL: CP000139 - RefSeq: YP_001298784.1 - ProteinModelPortal: A6L0E8 - SMR: A6L0E8 - STRING: A6L0E8 - GeneID: 5302441 - GenomeReviews: CP000139_GR - KEGG: bvu:BVU_1475 - NMPDR: fig|435590.6.peg.1393 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: LPYVMGQ - ProtClustDB: PRK01406 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 57875; Mature: 57743
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 263-263
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERKVRVRFAPSPTGALHIGGVRTALYNYLFARQHGGDLIFRIEDTDSNRFVPGAEEYI CCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHH IESFKWLGINFDEGVSFGGNYGPYRQSERRDIYKKYVQVLLDSGKAYIAFDTPAELDAKR HHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH QEISNFQYDASTRMSMRNSLTLPKEEVDALIADGKQYVVRFKIEPNEDVHVHDIIRGEVV HHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEECEEE INSSILDDKVLYKSADELPTYHLANIVDDHLMEVSHVIRGEEWLPSAPLHVLLYRAFGWA EECCCCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC DTMPEFAHLPLLLKPDGNGKLSKRDGDRLGFPVFPLEWHDPKTGEVSSGYRESGYLPEAV CCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH INFLALLGWNPGNDQELMSLDELVKLFDLHRCSKAGAKFDFEKGKWFNHEYILKKSNEEV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCHH AGLFMPILKEHGIEAPMDKVVTVVGLMKDRVSFIKDLWETCKFFFVAPTEYDEKTRKKRW HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCC KEDSPERMLELADVLEALDDFSLENQEAVVMKWIEDKGYHLGNIMNAFRLTLVGEGKGPH CCCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEHHCCCCHHHHHHHHEEEEEEECCCCCC MFDISAVLGKEETLRRIRRAVEVLK EEEHHHHHCCHHHHHHHHHHHHHHC >Mature Secondary Structure SERKVRVRFAPSPTGALHIGGVRTALYNYLFARQHGGDLIFRIEDTDSNRFVPGAEEYI CCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHH IESFKWLGINFDEGVSFGGNYGPYRQSERRDIYKKYVQVLLDSGKAYIAFDTPAELDAKR HHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHH QEISNFQYDASTRMSMRNSLTLPKEEVDALIADGKQYVVRFKIEPNEDVHVHDIIRGEVV HHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEECEEE INSSILDDKVLYKSADELPTYHLANIVDDHLMEVSHVIRGEEWLPSAPLHVLLYRAFGWA EECCCCCHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC DTMPEFAHLPLLLKPDGNGKLSKRDGDRLGFPVFPLEWHDPKTGEVSSGYRESGYLPEAV CCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH INFLALLGWNPGNDQELMSLDELVKLFDLHRCSKAGAKFDFEKGKWFNHEYILKKSNEEV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCCHH AGLFMPILKEHGIEAPMDKVVTVVGLMKDRVSFIKDLWETCKFFFVAPTEYDEKTRKKRW HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHCC KEDSPERMLELADVLEALDDFSLENQEAVVMKWIEDKGYHLGNIMNAFRLTLVGEGKGPH CCCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEEHHCCCCHHHHHHHHEEEEEEECCCCCC MFDISAVLGKEETLRRIRRAVEVLK EEEHHHHHCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA