| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is malZ [C]
Identifier: 150003949
GI number: 150003949
Start: 1847480
End: 1849330
Strand: Reverse
Name: malZ [C]
Synonym: BVU_1382
Alternate gene names: 150003949
Gene position: 1849330-1847480 (Counterclockwise)
Preceding gene: 150003951
Following gene: 150003948
Centisome position: 35.82
GC content: 42.25
Gene sequence:
>1851_bases ATGAAAAGAACATTCGCACTTATGGCATTACTCGCGTTATTCGGTTTGCAACACACAGTGTCCGCAGCCATAATTAAAAA AGTAGCCCCAACCTTCTGGTGGGCGGATATGAAGAATCCCGAACTACAGGTCCTACTGTATGGCGACAATATTTCTTCCA GTGATGTAAGCATCTCTTCTAAAGACATTCTTCTGAAAGATGTTGTGAAACAAGAAAATCCCAATTACTTAATCTTATAT ATGGATTTATCGGAAGCTACTCCGCAGACTTTTCATATTACACTGAAACAAGGTAAAAAGCAAACTGTTGTGCCATATGA AATAAAACAGCGTAAGGCAGATGCTTCCAACGTGGAAGGCTTCAACTCAGGTGACGTATTATATCTGATTATGCCAGACC GCTTCGCCAACGGAAATCCCTCGAACGATGTCGTACCGGAAATGTTGGAAACAAAGGTAGACCGTAACGATCCGTTCGCC CGTCACGGGGGCGACCTCGCAGGTATTGAAAATAATCTGGATTATCTCTCCAACTTGGGAGTTACGGCAATCTGGCTGAA CCCCATACAGGAAAATGACATGAAAGAAGGATCCTATCATGGCTATGCCATTACCGATTATTATCAAGTAGACCGCAGAT TAGGTAGCAATGAAGAATTCTGCAAGCTGGTAGAACAAGCACACAGCAAAGGAATGAAAGTTGTTATGGACATGATTTTC AACCATTGTGGCAGCGAAAACTATCTTTTCAAAGATATGCCTTCCAAAGACTGGTTCAATTTTAAAGGAAACTACACACA AACTTCTTATAAAACAGCGAGTGTACAGGATATCCACGCTTCTGATTATGAACGCAAGATAGCCGTAGACGGATGGTTTA CAGAATCAATGCCCGACTTGAACCAACGCAACCGCCATGTAGCCCGCTATTTGATCCAAAGCAGTATCTGGTGGATAGAA TATGCAGGGATTAACGGCATCCGTCAAGACACACATCCTTACGCAGATTTCGACATGATGTCAGAATGGTGTAAAGCCGT GACCGATGAGTACCCTGATTTCAACATAGTAGGTGAAACTTGGTTGAACAGTAATGTGCTGGTTTCTTTCTGGCAGAAAG ACAGCAGACTGGCTGCTCCCAGAAACTCCAATCTCCGTACCGTGATGGATTTCCCGCTGATGGAACAAATGAACAAAGCC TTTGACGAAGAAACAACTGACTGGAACGGCGGATTATATCGTCTTTACGATTATCTTACTCAGGATTTGGTATATGCAGA TCCGATGAATCTGCTCGTTTTCCTTGATAACCATGATACTTCACGCTTTTATTTAAATGAAGAAGCCACGCAAAATATTG ACCGCTACAAACAAGCACTTGTATTCCTGCTGACCACACGTGGCATTCCCCAGATTTATTATGGGACAGAAATTCTGATG GCTGCAGATAAAGCCAATGGCGACGGTCTGTTACGTTGTGATTTCCCCGGAGGTTGGAAAAATGACCCACGCAACTGTTT CAATGAGGCTAACCGTACTCCGCAGCAAAATGAAGCCTTTACTTATATGCAGAAATTACTCCAATGGAGAAAAGGGAATG AAGTCATAGCCAAAGGCAGATTGAAACACTTCGCTCCCAACAAAGGAATTTACGTTTATGAACGAAAATACGGAAACAAA TCGATAACGGTTCTCATGAATGGAACAGACAAAACGCAAACCATAAACCTGACTCCATACAAAGAAGTACTTCCAACAAC ATCAACCCATGATGTTTTAACGGATCAAAATATCGACTTGAATAAAAACCTAACACTTCCGGGGCGTGGAATGCTAGTTT TAGAATTTTAA
Upstream 100 bases:
>100_bases CATTTATATTTTTATTCTAGTACTCAAATCTCAGCTATTCCACTCCTACATTTGCAACATCCAAATGAAATGAAGATATA AACACTAATTTCTATATATT
Downstream 100 bases:
>100_bases AACAACCAGTAAAAGCTTATAATTTAATACCAGTACATATTATGAATTTAAAAAAGAATCTTTCACTTATCGCATTTCTC TGTATCTCATTCATTGCAAA
Product: glycoside hydrolase family alpha-glucosidase
Products: NA
Alternate protein names: CDase; Cyclomaltodextrin hydrolase, decycling [H]
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MKRTFALMALLALFGLQHTVSAAIIKKVAPTFWWADMKNPELQVLLYGDNISSSDVSISSKDILLKDVVKQENPNYLILY MDLSEATPQTFHITLKQGKKQTVVPYEIKQRKADASNVEGFNSGDVLYLIMPDRFANGNPSNDVVPEMLETKVDRNDPFA RHGGDLAGIENNLDYLSNLGVTAIWLNPIQENDMKEGSYHGYAITDYYQVDRRLGSNEEFCKLVEQAHSKGMKVVMDMIF NHCGSENYLFKDMPSKDWFNFKGNYTQTSYKTASVQDIHASDYERKIAVDGWFTESMPDLNQRNRHVARYLIQSSIWWIE YAGINGIRQDTHPYADFDMMSEWCKAVTDEYPDFNIVGETWLNSNVLVSFWQKDSRLAAPRNSNLRTVMDFPLMEQMNKA FDEETTDWNGGLYRLYDYLTQDLVYADPMNLLVFLDNHDTSRFYLNEEATQNIDRYKQALVFLLTTRGIPQIYYGTEILM AADKANGDGLLRCDFPGGWKNDPRNCFNEANRTPQQNEAFTYMQKLLQWRKGNEVIAKGRLKHFAPNKGIYVYERKYGNK SITVLMNGTDKTQTINLTPYKEVLPTTSTHDVLTDQNIDLNKNLTLPGRGMLVLEF
Sequences:
>Translated_616_residues MKRTFALMALLALFGLQHTVSAAIIKKVAPTFWWADMKNPELQVLLYGDNISSSDVSISSKDILLKDVVKQENPNYLILY MDLSEATPQTFHITLKQGKKQTVVPYEIKQRKADASNVEGFNSGDVLYLIMPDRFANGNPSNDVVPEMLETKVDRNDPFA RHGGDLAGIENNLDYLSNLGVTAIWLNPIQENDMKEGSYHGYAITDYYQVDRRLGSNEEFCKLVEQAHSKGMKVVMDMIF NHCGSENYLFKDMPSKDWFNFKGNYTQTSYKTASVQDIHASDYERKIAVDGWFTESMPDLNQRNRHVARYLIQSSIWWIE YAGINGIRQDTHPYADFDMMSEWCKAVTDEYPDFNIVGETWLNSNVLVSFWQKDSRLAAPRNSNLRTVMDFPLMEQMNKA FDEETTDWNGGLYRLYDYLTQDLVYADPMNLLVFLDNHDTSRFYLNEEATQNIDRYKQALVFLLTTRGIPQIYYGTEILM AADKANGDGLLRCDFPGGWKNDPRNCFNEANRTPQQNEAFTYMQKLLQWRKGNEVIAKGRLKHFAPNKGIYVYERKYGNK SITVLMNGTDKTQTINLTPYKEVLPTTSTHDVLTDQNIDLNKNLTLPGRGMLVLEF >Mature_616_residues MKRTFALMALLALFGLQHTVSAAIIKKVAPTFWWADMKNPELQVLLYGDNISSSDVSISSKDILLKDVVKQENPNYLILY MDLSEATPQTFHITLKQGKKQTVVPYEIKQRKADASNVEGFNSGDVLYLIMPDRFANGNPSNDVVPEMLETKVDRNDPFA RHGGDLAGIENNLDYLSNLGVTAIWLNPIQENDMKEGSYHGYAITDYYQVDRRLGSNEEFCKLVEQAHSKGMKVVMDMIF NHCGSENYLFKDMPSKDWFNFKGNYTQTSYKTASVQDIHASDYERKIAVDGWFTESMPDLNQRNRHVARYLIQSSIWWIE YAGINGIRQDTHPYADFDMMSEWCKAVTDEYPDFNIVGETWLNSNVLVSFWQKDSRLAAPRNSNLRTVMDFPLMEQMNKA FDEETTDWNGGLYRLYDYLTQDLVYADPMNLLVFLDNHDTSRFYLNEEATQNIDRYKQALVFLLTTRGIPQIYYGTEILM AADKANGDGLLRCDFPGGWKNDPRNCFNEANRTPQQNEAFTYMQKLLQWRKGNEVIAKGRLKHFAPNKGIYVYERKYGNK SITVLMNGTDKTQTINLTPYKEVLPTTSTHDVLTDQNIDLNKNLTLPGRGMLVLEF
Specific function: Hydrolyzes cyclodextrins. Can also act on linear maltodextrins, with the exception of maltose [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=191, Percent_Identity=25.6544502617801, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1786604, Length=526, Percent_Identity=23.574144486692, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1789995, Length=528, Percent_Identity=22.7272727272727, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1790687, Length=179, Percent_Identity=29.608938547486, Blast_Score=79, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6322245, Length=187, Percent_Identity=32.0855614973262, Blast_Score=92, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6321726, Length=188, Percent_Identity=28.7234042553192, Blast_Score=89, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324416, Length=187, Percent_Identity=28.8770053475936, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6322241, Length=187, Percent_Identity=28.8770053475936, Blast_Score=88, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6322021, Length=187, Percent_Identity=28.8770053475936, Blast_Score=88, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6319776, Length=188, Percent_Identity=29.2553191489362, Blast_Score=87, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6321731, Length=188, Percent_Identity=29.2553191489362, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI221330053, Length=247, Percent_Identity=28.3400809716599, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI24583747, Length=490, Percent_Identity=22.4489795918367, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24583749, Length=490, Percent_Identity=22.4489795918367, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24586597, Length=523, Percent_Identity=23.1357552581262, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI24586599, Length=184, Percent_Identity=30.4347826086957, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI24586587, Length=185, Percent_Identity=28.1081081081081, Blast_Score=76, Evalue=8e-14, Organism=Drosophila melanogaster, GI45549022, Length=191, Percent_Identity=27.2251308900524, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24583745, Length=215, Percent_Identity=27.4418604651163, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24586593, Length=185, Percent_Identity=27.5675675675676, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI24586591, Length=184, Percent_Identity=28.2608695652174, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR004185 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N [H]
EC number: =3.2.1.54 [H]
Molecular weight: Translated: 70847; Mature: 70847
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTFALMALLALFGLQHTVSAAIIKKVAPTFWWADMKNPELQVLLYGDNISSSDVSISS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCCCCCCC KDILLKDVVKQENPNYLILYMDLSEATPQTFHITLKQGKKQTVVPYEIKQRKADASNVEG CHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCC FNSGDVLYLIMPDRFANGNPSNDVVPEMLETKVDRNDPFARHGGDLAGIENNLDYLSNLG CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHCCC VTAIWLNPIQENDMKEGSYHGYAITDYYQVDRRLGSNEEFCKLVEQAHSKGMKVVMDMIF EEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHH NHCGSENYLFKDMPSKDWFNFKGNYTQTSYKTASVQDIHASDYERKIAVDGWFTESMPDL HHCCCCCCEECCCCCCCCCCCCCCEEECCEEECCEEECCCCCCCCEEEEECEECCCCCCH NQRNRHVARYLIQSSIWWIEYAGINGIRQDTHPYADFDMMSEWCKAVTDEYPDFNIVGET HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHH WLNSNVLVSFWQKDSRLAAPRNSNLRTVMDFPLMEQMNKAFDEETTDWNGGLYRLYDYLT HCCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH QDLVYADPMNLLVFLDNHDTSRFYLNEEATQNIDRYKQALVFLLTTRGIPQIYYGTEILM HHHEEECCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEE AADKANGDGLLRCDFPGGWKNDPRNCFNEANRTPQQNEAFTYMQKLLQWRKGNEVIAKGR EECCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCC LKHFAPNKGIYVYERKYGNKSITVLMNGTDKTQTINLTPYKEVLPTTSTHDVLTDQNIDL HHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCC NKNLTLPGRGMLVLEF CCCCCCCCCCEEEEEC >Mature Secondary Structure MKRTFALMALLALFGLQHTVSAAIIKKVAPTFWWADMKNPELQVLLYGDNISSSDVSISS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCCCCCCCC KDILLKDVVKQENPNYLILYMDLSEATPQTFHITLKQGKKQTVVPYEIKQRKADASNVEG CHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCCC FNSGDVLYLIMPDRFANGNPSNDVVPEMLETKVDRNDPFARHGGDLAGIENNLDYLSNLG CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHCCC VTAIWLNPIQENDMKEGSYHGYAITDYYQVDRRLGSNEEFCKLVEQAHSKGMKVVMDMIF EEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHH NHCGSENYLFKDMPSKDWFNFKGNYTQTSYKTASVQDIHASDYERKIAVDGWFTESMPDL HHCCCCCCEECCCCCCCCCCCCCCEEECCEEECCEEECCCCCCCCEEEEECEECCCCCCH NQRNRHVARYLIQSSIWWIEYAGINGIRQDTHPYADFDMMSEWCKAVTDEYPDFNIVGET HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHH WLNSNVLVSFWQKDSRLAAPRNSNLRTVMDFPLMEQMNKAFDEETTDWNGGLYRLYDYLT HCCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH QDLVYADPMNLLVFLDNHDTSRFYLNEEATQNIDRYKQALVFLLTTRGIPQIYYGTEILM HHHEEECCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEE AADKANGDGLLRCDFPGGWKNDPRNCFNEANRTPQQNEAFTYMQKLLQWRKGNEVIAKGR EECCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECCC LKHFAPNKGIYVYERKYGNKSITVLMNGTDKTQTINLTPYKEVLPTTSTHDVLTDQNIDL HHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCC NKNLTLPGRGMLVLEF CCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1644767; 8425614 [H]