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The map label for this gene is yjiR [C]

Identifier: 150003941

GI number: 150003941

Start: 1834042

End: 1835022

Strand: Reverse

Name: yjiR [C]

Synonym: BVU_1374

Alternate gene names: 150003941

Gene position: 1835022-1834042 (Counterclockwise)

Preceding gene: 150003945

Following gene: 150003940

Centisome position: 35.54

GC content: 39.65

Gene sequence:

>981_bases
ATGAAAGTTACCTTTGGACAGCAGACCACTAAAGTGAAACAACTGGCTGATTTACTCAGTCAGGAGATTTCCATGGGCAA
ATATAAATCGGACTGCACATTACCGTCCATCAACAAACTGAGCCGTGAGTATCAAGTGTCGCGGGATACGGTGTTCAAAG
CATTCATTGATTTAAAAGACCGGGGAATAATAGACTCTACTCCGGGAAAAGGTTACTACGTAACCAACAAGCTTACAAAC
ATTCTGCTTCTGCTGGACGAGTATTCTCCCTTTAAATACTCGTTATATAATAGTTTTATCAAAAAACTATCCATCAACTA
CAAAGTAGATTTATTGTTTCATCAATATAATGAACGACTTTTCAATACCATCTTACGTGAATCAATAGGCAGATACAATA
AATACATTGTGATGAACTTCGACAATGAGAAACTATCCCCCCATCTTTACAAAATAGATTCGTCTAAGTTGCTGCTGTTG
GATTTCGGGAAGTTCGATAAAAAGGATTATTCATACGTATGTCAGGATTTTGACGATTCCTTTTATCATGCATTGGCCGC
ATTGAAAGAGCATCTGAGAAAATATCAGAGACTAGTACTTTTATTTCCCGAAGACATCAAACACCCCCGTAGCAGTTGTC
AGTATTTCAATTGCTTCTGTCAGGATTATCACATTGATTCAGCCATTGTGGAAAATACAGACCGGATACAAGTCCGTAAA
GGAGAAGTATATATTGCAATCCGTCAGATAGAGGTGGTCAATATAATCAAGCAAAGCCGGACAACCGGGCTGAAATGCGG
AGAAGATTTCGGACTGATAGCCTACAATGACACTCCTGCCTACGAGGTAATAGACCAAGGGATTACGGTACTCAGTATCA
ACTGGGAAGAGCTGGGGCGGAAAGCCGCAGAATTTGTACTAACCGGACAGGAAATAAGAACTTATCTCCCTACCGAAGTC
CATTTAAGAAATTCAATTTAA

Upstream 100 bases:

>100_bases
ACATACCTTTTCATCTTGCTGTTTATGAATAAATTGCATTCCTTTGCATCGGGACAGTTCAGCACAGTTTGCATTGTCCG
CGTAAAACCTTAAACAGTTC

Downstream 100 bases:

>100_bases
CAACTAAAACCTATGTATATCATGAAAAAGTATCCTAAAATCGGGATTCGTCCCACTATCGACGGTCGCCAGGGTGGTGT
CCGCGAAAGCCTTGAAGACA

Product: transcriptional regulator, FucR

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator Gntr Family

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKVTFGQQTTKVKQLADLLSQEISMGKYKSDCTLPSINKLSREYQVSRDTVFKAFIDLKDRGIIDSTPGKGYYVTNKLTN
ILLLLDEYSPFKYSLYNSFIKKLSINYKVDLLFHQYNERLFNTILRESIGRYNKYIVMNFDNEKLSPHLYKIDSSKLLLL
DFGKFDKKDYSYVCQDFDDSFYHALAALKEHLRKYQRLVLLFPEDIKHPRSSCQYFNCFCQDYHIDSAIVENTDRIQVRK
GEVYIAIRQIEVVNIIKQSRTTGLKCGEDFGLIAYNDTPAYEVIDQGITVLSINWEELGRKAAEFVLTGQEIRTYLPTEV
HLRNSI

Sequences:

>Translated_326_residues
MKVTFGQQTTKVKQLADLLSQEISMGKYKSDCTLPSINKLSREYQVSRDTVFKAFIDLKDRGIIDSTPGKGYYVTNKLTN
ILLLLDEYSPFKYSLYNSFIKKLSINYKVDLLFHQYNERLFNTILRESIGRYNKYIVMNFDNEKLSPHLYKIDSSKLLLL
DFGKFDKKDYSYVCQDFDDSFYHALAALKEHLRKYQRLVLLFPEDIKHPRSSCQYFNCFCQDYHIDSAIVENTDRIQVRK
GEVYIAIRQIEVVNIIKQSRTTGLKCGEDFGLIAYNDTPAYEVIDQGITVLSINWEELGRKAAEFVLTGQEIRTYLPTEV
HLRNSI
>Mature_326_residues
MKVTFGQQTTKVKQLADLLSQEISMGKYKSDCTLPSINKLSREYQVSRDTVFKAFIDLKDRGIIDSTPGKGYYVTNKLTN
ILLLLDEYSPFKYSLYNSFIKKLSINYKVDLLFHQYNERLFNTILRESIGRYNKYIVMNFDNEKLSPHLYKIDSSKLLLL
DFGKFDKKDYSYVCQDFDDSFYHALAALKEHLRKYQRLVLLFPEDIKHPRSSCQYFNCFCQDYHIDSAIVENTDRIQVRK
GEVYIAIRQIEVVNIIKQSRTTGLKCGEDFGLIAYNDTPAYEVIDQGITVLSINWEELGRKAAEFVLTGQEIRTYLPTEV
HLRNSI

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38068; Mature: 38068

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTFGQQTTKVKQLADLLSQEISMGKYKSDCTLPSINKLSREYQVSRDTVFKAFIDLKD
CEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
RGIIDSTPGKGYYVTNKLTNILLLLDEYSPFKYSLYNSFIKKLSINYKVDLLFHQYNERL
CCCEECCCCCCEEEHHHHCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHH
FNTILRESIGRYNKYIVMNFDNEKLSPHLYKIDSSKLLLLDFGKFDKKDYSYVCQDFDDS
HHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHCCCHH
FYHALAALKEHLRKYQRLVLLFPEDIKHPRSSCQYFNCFCQDYHIDSAIVENTDRIQVRK
HHHHHHHHHHHHHHHHHEEEECCHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEE
GEVYIAIRQIEVVNIIKQSRTTGLKCGEDFGLIAYNDTPAYEVIDQGITVLSINWEELGR
CCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHCCCEEEEECHHHHHH
KAAEFVLTGQEIRTYLPTEVHLRNSI
HHHHHHEECHHHHHHCCCEEEECCCC
>Mature Secondary Structure
MKVTFGQQTTKVKQLADLLSQEISMGKYKSDCTLPSINKLSREYQVSRDTVFKAFIDLKD
CEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
RGIIDSTPGKGYYVTNKLTNILLLLDEYSPFKYSLYNSFIKKLSINYKVDLLFHQYNERL
CCCEECCCCCCEEEHHHHCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHH
FNTILRESIGRYNKYIVMNFDNEKLSPHLYKIDSSKLLLLDFGKFDKKDYSYVCQDFDDS
HHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHCCCHH
FYHALAALKEHLRKYQRLVLLFPEDIKHPRSSCQYFNCFCQDYHIDSAIVENTDRIQVRK
HHHHHHHHHHHHHHHHHEEEECCHHHCCHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEE
GEVYIAIRQIEVVNIIKQSRTTGLKCGEDFGLIAYNDTPAYEVIDQGITVLSINWEELGR
CCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHCCCEEEEECHHHHHH
KAAEFVLTGQEIRTYLPTEVHLRNSI
HHHHHHEECHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA