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The map label for this gene is ybjE [H]

Identifier: 150003933

GI number: 150003933

Start: 1822460

End: 1823062

Strand: Reverse

Name: ybjE [H]

Synonym: BVU_1366

Alternate gene names: 150003933

Gene position: 1823062-1822460 (Counterclockwise)

Preceding gene: 150003934

Following gene: 150003932

Centisome position: 35.31

GC content: 43.78

Gene sequence:

>603_bases
ATGAAAGGAAGTTTGATTATCGTCGGATTCTTTGTACTGGGAGCTCTTTGTGGGGTATATCACCTTATTCCATACGACTT
TACACAAAGTAAGCTAAGTTTCTACGCCTTGTGTGCGTTAATGTTCAGTGTAGGAGTCAGTGTAGGTAATGATCCGCAGA
CTTTACGTAATTTCCGTTCATTAAATCCCCGCCTGATCTTTCTACCGGTCATGACCATATTGGGAACACTGGCAGGATGC
GCAGTGGTCAGTCTGTTTCTCTCGCACCGCTCAGTAACAGACTGTATGGCAGTAGGTGCCGGTTTCGGCTATTACTCTCT
ATCCAGTATCTTTATTACAGAATATAAAGGTCCGGAGTTGGGAACCATTGCATTATTATCCAATATCACACGTGAGATTA
TCACTTTGCTTTTTGCCCCGTTGCTAGTACGCTGGTTTGGCAATCTGGCCCCTATTTCTGCCGGAGGAGCCACTACGATG
GATACAACATTACCCATCATCACCCGCTATTCCGGTCAAAGCTTCGTAGTAGTTTCTATATTTCACGGCTTTGTAGTAGA
CTTCAGCGTACCTTTTCTTGTGACTCTTTTCTGTTCTATTTAA

Upstream 100 bases:

>100_bases
TGGAAGCCATTGTCATCACCTTGGCAGCAGTGCTGGGCAGTGTTACAGCAGCATGGGCTTTATGGTATGTACTTTACAAA
AGAAATAAGGAGGGACAAGT

Downstream 100 bases:

>100_bases
AATAACAATAACCATGAAACACTCTCTTCATACTGTTCTTACACTGTTGTTTGTTTGTGCTTCCGCCTGGGGTGAAAATG
TCCCCTGGCAGAATCCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKGSLIIVGFFVLGALCGVYHLIPYDFTQSKLSFYALCALMFSVGVSVGNDPQTLRNFRSLNPRLIFLPVMTILGTLAGC
AVVSLFLSHRSVTDCMAVGAGFGYYSLSSIFITEYKGPELGTIALLSNITREIITLLFAPLLVRWFGNLAPISAGGATTM
DTTLPIITRYSGQSFVVVSIFHGFVVDFSVPFLVTLFCSI

Sequences:

>Translated_200_residues
MKGSLIIVGFFVLGALCGVYHLIPYDFTQSKLSFYALCALMFSVGVSVGNDPQTLRNFRSLNPRLIFLPVMTILGTLAGC
AVVSLFLSHRSVTDCMAVGAGFGYYSLSSIFITEYKGPELGTIALLSNITREIITLLFAPLLVRWFGNLAPISAGGATTM
DTTLPIITRYSGQSFVVVSIFHGFVVDFSVPFLVTLFCSI
>Mature_200_residues
MKGSLIIVGFFVLGALCGVYHLIPYDFTQSKLSFYALCALMFSVGVSVGNDPQTLRNFRSLNPRLIFLPVMTILGTLAGC
AVVSLFLSHRSVTDCMAVGAGFGYYSLSSIFITEYKGPELGTIALLSNITREIITLLFAPLLVRWFGNLAPISAGGATTM
DTTLPIITRYSGQSFVVVSIFHGFVVDFSVPFLVTLFCSI

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=198, Percent_Identity=33.8383838383838, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 21649; Mature: 21649

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSLIIVGFFVLGALCGVYHLIPYDFTQSKLSFYALCALMFSVGVSVGNDPQTLRNFRS
CCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
LNPRLIFLPVMTILGTLAGCAVVSLFLSHRSVTDCMAVGAGFGYYSLSSIFITEYKGPEL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHEEEEECCCCCC
GTIALLSNITREIITLLFAPLLVRWFGNLAPISAGGATTMDTTLPIITRYSGQSFVVVSI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEECCCCEEEHHH
FHGFVVDFSVPFLVTLFCSI
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGSLIIVGFFVLGALCGVYHLIPYDFTQSKLSFYALCALMFSVGVSVGNDPQTLRNFRS
CCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC
LNPRLIFLPVMTILGTLAGCAVVSLFLSHRSVTDCMAVGAGFGYYSLSSIFITEYKGPEL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHEEEEECCCCCC
GTIALLSNITREIITLLFAPLLVRWFGNLAPISAGGATTMDTTLPIITRYSGQSFVVVSI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEECCCCEEEHHH
FHGFVVDFSVPFLVTLFCSI
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]