| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is aroK
Identifier: 150003903
GI number: 150003903
Start: 1787083
End: 1787610
Strand: Direct
Name: aroK
Synonym: BVU_1336
Alternate gene names: 150003903
Gene position: 1787083-1787610 (Clockwise)
Preceding gene: 150003902
Following gene: 150003904
Centisome position: 34.61
GC content: 42.99
Gene sequence:
>528_bases ATGACACGTATATTTTTAATAGGATATATGGGCGCGGGCAAAACGACTCTAGGTAAGGCGTTTGCCCGTGAAATGAGTCT GAATTTCATTGATTTGGACTGGTTTATCGAGGAACGTTTCCATAAAACCGTTCAACAGCTGTTCTTGGAACGCGGAGAAG ACGGATTCCGGGAACTGGAACGGAAAATGTTGCACGAAGTGGCCGAGTTTGAAGATGTGGTTGTTTCGACCGGTGGAGGA ACACCTTGTTTTTTTGATAACATGGAGTATATGAATGATTGCGGTGATACGGTGTTTCTGGATGTGGAACCTGCCGTATT GTTCCGCCGTCTGAGAGTGGCCAAGCAGCAACGTCCATTGTTAGCAAATAAAAGTGATGAGGAACTGATGGATTTTATCT GTGAGGCGTTACAGAAAAGACATCCGTTTTATTCAAAGGCGAAACATCTGTTTAAGGCTGATGAGCTGGAGGATAAAAGA CAAATTCAAGCCTCTGTTGACAGCTTGAGAAAGAAATTGAATAAATAA
Upstream 100 bases:
>100_bases ACAGGGGAACCGTGAATATGGAAGAGGAGTCCGAAAAGCCCGAAGAATCCGCAAAAAGTAAGGCGGCTTCCAAGGTAAAG GGCACTGCAAAAGCAAAAAA
Downstream 100 bases:
>100_bases TTATATATAGTAAAATACACACTCTTTGTACAGAAGAAGAAATGAGAAAATGGCGTATTGAAGATTCGGAAGAACTCTAC AACATAACAGGGTGGGGAAC
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTRIFLIGYMGAGKTTLGKAFAREMSLNFIDLDWFIEERFHKTVQQLFLERGEDGFRELERKMLHEVAEFEDVVVSTGGG TPCFFDNMEYMNDCGDTVFLDVEPAVLFRRLRVAKQQRPLLANKSDEELMDFICEALQKRHPFYSKAKHLFKADELEDKR QIQASVDSLRKKLNK
Sequences:
>Translated_175_residues MTRIFLIGYMGAGKTTLGKAFAREMSLNFIDLDWFIEERFHKTVQQLFLERGEDGFRELERKMLHEVAEFEDVVVSTGGG TPCFFDNMEYMNDCGDTVFLDVEPAVLFRRLRVAKQQRPLLANKSDEELMDFICEALQKRHPFYSKAKHLFKADELEDKR QIQASVDSLRKKLNK >Mature_174_residues TRIFLIGYMGAGKTTLGKAFAREMSLNFIDLDWFIEERFHKTVQQLFLERGEDGFRELERKMLHEVAEFEDVVVSTGGGT PCFFDNMEYMNDCGDTVFLDVEPAVLFRRLRVAKQQRPLLANKSDEELMDFICEALQKRHPFYSKAKHLFKADELEDKRQ IQASVDSLRKKLNK
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=142, Percent_Identity=33.0985915492958, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786587, Length=173, Percent_Identity=30.0578034682081, Blast_Score=77, Evalue=5e-16,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_BACV8 (A6L011)
Other databases:
- EMBL: CP000139 - RefSeq: YP_001298647.1 - ProteinModelPortal: A6L011 - SMR: A6L011 - STRING: A6L011 - GeneID: 5302302 - GenomeReviews: CP000139_GR - KEGG: bvu:BVU_1336 - NMPDR: fig|435590.6.peg.1258 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: VEKEGWE - ProtClustDB: PRK13949 - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 20453; Mature: 20322
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 33-33 BINDING 57-57 BINDING 79-79 BINDING 118-118 BINDING 140-140
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIFLIGYMGAGKTTLGKAFAREMSLNFIDLDWFIEERFHKTVQQLFLERGEDGFRELE CCEEEEEEECCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RKMLHEVAEFEDVVVSTGGGTPCFFDNMEYMNDCGDTVFLDVEPAVLFRRLRVAKQQRPL HHHHHHHHHHHHHEEECCCCCCCEECCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC LANKSDEELMDFICEALQKRHPFYSKAKHLFKADELEDKRQIQASVDSLRKKLNK CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRIFLIGYMGAGKTTLGKAFAREMSLNFIDLDWFIEERFHKTVQQLFLERGEDGFRELE CEEEEEEECCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RKMLHEVAEFEDVVVSTGGGTPCFFDNMEYMNDCGDTVFLDVEPAVLFRRLRVAKQQRPL HHHHHHHHHHHHHEEECCCCCCCEECCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC LANKSDEELMDFICEALQKRHPFYSKAKHLFKADELEDKRQIQASVDSLRKKLNK CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA