| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003889
Identifier: 150003889
GI number: 150003889
Start: 1772330
End: 1773895
Strand: Reverse
Name: 150003889
Synonym: BVU_1322
Alternate gene names: NA
Gene position: 1773895-1772330 (Counterclockwise)
Preceding gene: 150003890
Following gene: 150003888
Centisome position: 34.36
GC content: 44.96
Gene sequence:
>1566_bases ATGAAAAAGGATGAGGTCATAGAGTTATTGAAGGAGCAAATCAAGGAGTTGCGGGATGATAACAACAGACTCCTGGACCA GATAGATGATTTGATAAAGGAGGTTTCTTCCCTTAAAGAGGCACTCCTTCAAAAAGGCGAATCTCTTGGCAAGCAACAGC GTCTTACCAAGGGGATCGCCAAACTTGTATCAAACACATCCGAACAGCAACAACCCCCTCAACCTGCATTGCCGGAGGAA GAGCGGCAGAAGAGAGAAGCAGAAAAAGCAGATAAGCGTAAAGCCAGAAAGAACAATGGGGCCAAACGTGACATGCATTA TGAGATGGAGCAGGAGGAACATGACGTTTATCCCGACGATCCTGATTTTGACATCAATAAAGCCCGGCTGGTTACCACCG CTCCCAGAATATGTGTCCGCTATGAATGTGTACCCATGCGCTTCATCAAGCACGTCTACAAGATACACACCTACGCGCAA GACGGTTGTCTCTTTGAGGGAAAAACACCGGTCTCGGCTTTCTTGAATTCCAGCTATGACGGCTCATTCATTGCCGGGCT GATGGAATTGCGTTATATACAATCGCTACCGGTTGAAAGAATCATCAACTACTTCGAAAGTCATGGCTTTACGCTGAAGA AACCTACGGCTCATAAGTTGATGGAAAAAGCCTCAAGCCTCTTTGAAAATCTTTATAAGTGTATCCGGCAGACAGCTTTG AGTGATCCTTATAAGGCAGCCGACGAAACCTATTACAAAATACTCGTCCCGGAAAAGAACAGCAAGGGAAAAGGAGTCCG CAAGGGATACCTCTGGGTGGTTGTGGGCATAAACACCAGGATGATATACCTGCTCTATGATGACGGCTCCCGCTCTGAAA AAGTTATTCTTAACGAATTAGGCGGTTGCAAAGGTATCATACAAAGCGACGGATACTCACCTTACCGGAAACTCGAAAGC GATGCTTATCCCCATATCACACGCATTCCGTGCCTGCAACATATAAAACGGAAATTTATAGATTGCGGTGAGGATGACCC GGATGCAAAAAGAATCGTGGAGATGATAAACACACTTTATCAAAATGAACATAAGCATAAGATCGGGGTTGACGGATGGA CGGTAGAACAGAATCTTGTCCATCGGAAAAAGTATGCGCCGGACATACTCGGAGAAATAAAAGATGTGCTTGATGATATA GAAGAACGGGGAGATTTGTTGCCTAAGAGCGAACTGAAGGAAGCTATCACCTATCTTCGCAATGAGTGGAATGCCGTGGT GGACATCTTTAATTATGGTGACACTTACCTGGACAACAATATAGTTGAACGGATGAACCGCTACATATCCTTATCAAGAA AAAACTCATTGTTCTTCGGCAGCCATAAGGGAGCCGAACGGGGCGCCATACTCTACACGATAGCACTTACTTGTAGGATG AATAAAGTGAATCTGTTTGAGTATCTCACGGATATCATAAACAGAACTGCCGAATGGCAACCGAATACACCACTGGAAAA ATACAGGCAACTGCTTCCCGACAGATGGGAAAAGGCTAATGACTAA
Upstream 100 bases:
>100_bases GTTTTAGGATTTAATGTAATATACTGTATATTAACTGTTTGATTTTAAATTACCATCCGATTATTTTGGCCGACTCATTG ATTTTTTGTATCTTTACGCC
Downstream 100 bases:
>100_bases AAAGGGATCATTAGACTTTTTACTTTTAATATACTATATAGAATCGCGGAGACGCTTACCATGACAGTCTACTTTTAATA CTTCAAGGAAACGTTCCCAG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MKKDEVIELLKEQIKELRDDNNRLLDQIDDLIKEVSSLKEALLQKGESLGKQQRLTKGIAKLVSNTSEQQQPPQPALPEE ERQKREAEKADKRKARKNNGAKRDMHYEMEQEEHDVYPDDPDFDINKARLVTTAPRICVRYECVPMRFIKHVYKIHTYAQ DGCLFEGKTPVSAFLNSSYDGSFIAGLMELRYIQSLPVERIINYFESHGFTLKKPTAHKLMEKASSLFENLYKCIRQTAL SDPYKAADETYYKILVPEKNSKGKGVRKGYLWVVVGINTRMIYLLYDDGSRSEKVILNELGGCKGIIQSDGYSPYRKLES DAYPHITRIPCLQHIKRKFIDCGEDDPDAKRIVEMINTLYQNEHKHKIGVDGWTVEQNLVHRKKYAPDILGEIKDVLDDI EERGDLLPKSELKEAITYLRNEWNAVVDIFNYGDTYLDNNIVERMNRYISLSRKNSLFFGSHKGAERGAILYTIALTCRM NKVNLFEYLTDIINRTAEWQPNTPLEKYRQLLPDRWEKAND
Sequences:
>Translated_521_residues MKKDEVIELLKEQIKELRDDNNRLLDQIDDLIKEVSSLKEALLQKGESLGKQQRLTKGIAKLVSNTSEQQQPPQPALPEE ERQKREAEKADKRKARKNNGAKRDMHYEMEQEEHDVYPDDPDFDINKARLVTTAPRICVRYECVPMRFIKHVYKIHTYAQ DGCLFEGKTPVSAFLNSSYDGSFIAGLMELRYIQSLPVERIINYFESHGFTLKKPTAHKLMEKASSLFENLYKCIRQTAL SDPYKAADETYYKILVPEKNSKGKGVRKGYLWVVVGINTRMIYLLYDDGSRSEKVILNELGGCKGIIQSDGYSPYRKLES DAYPHITRIPCLQHIKRKFIDCGEDDPDAKRIVEMINTLYQNEHKHKIGVDGWTVEQNLVHRKKYAPDILGEIKDVLDDI EERGDLLPKSELKEAITYLRNEWNAVVDIFNYGDTYLDNNIVERMNRYISLSRKNSLFFGSHKGAERGAILYTIALTCRM NKVNLFEYLTDIINRTAEWQPNTPLEKYRQLLPDRWEKAND >Mature_521_residues MKKDEVIELLKEQIKELRDDNNRLLDQIDDLIKEVSSLKEALLQKGESLGKQQRLTKGIAKLVSNTSEQQQPPQPALPEE ERQKREAEKADKRKARKNNGAKRDMHYEMEQEEHDVYPDDPDFDINKARLVTTAPRICVRYECVPMRFIKHVYKIHTYAQ DGCLFEGKTPVSAFLNSSYDGSFIAGLMELRYIQSLPVERIINYFESHGFTLKKPTAHKLMEKASSLFENLYKCIRQTAL SDPYKAADETYYKILVPEKNSKGKGVRKGYLWVVVGINTRMIYLLYDDGSRSEKVILNELGGCKGIIQSDGYSPYRKLES DAYPHITRIPCLQHIKRKFIDCGEDDPDAKRIVEMINTLYQNEHKHKIGVDGWTVEQNLVHRKKYAPDILGEIKDVLDDI EERGDLLPKSELKEAITYLRNEWNAVVDIFNYGDTYLDNNIVERMNRYISLSRKNSLFFGSHKGAERGAILYTIALTCRM NKVNLFEYLTDIINRTAEWQPNTPLEKYRQLLPDRWEKAND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 60531; Mature: 60531
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDEVIELLKEQIKELRDDNNRLLDQIDDLIKEVSSLKEALLQKGESLGKQQRLTKGIA CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVSNTSEQQQPPQPALPEEERQKREAEKADKRKARKNNGAKRDMHYEMEQEEHDVYPDD HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC PDFDINKARLVTTAPRICVRYECVPMRFIKHVYKIHTYAQDGCLFEGKTPVSAFLNSSYD CCCCCCCCEEEEECCCHHHEECHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHCCCCC GSFIAGLMELRYIQSLPVERIINYFESHGFTLKKPTAHKLMEKASSLFENLYKCIRQTAL HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHC SDPYKAADETYYKILVPEKNSKGKGVRKGYLWVVVGINTRMIYLLYDDGSRSEKVILNEL CCCHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHC GGCKGIIQSDGYSPYRKLESDAYPHITRIPCLQHIKRKFIDCGEDDPDAKRIVEMINTLY CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QNEHKHKIGVDGWTVEQNLVHRKKYAPDILGEIKDVLDDIEERGDLLPKSELKEAITYLR CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH NEWNAVVDIFNYGDTYLDNNIVERMNRYISLSRKNSLFFGSHKGAERGAILYTIALTCRM HHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEEEHHCC NKVNLFEYLTDIINRTAEWQPNTPLEKYRQLLPDRWEKAND CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHCCCCC >Mature Secondary Structure MKKDEVIELLKEQIKELRDDNNRLLDQIDDLIKEVSSLKEALLQKGESLGKQQRLTKGIA CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVSNTSEQQQPPQPALPEEERQKREAEKADKRKARKNNGAKRDMHYEMEQEEHDVYPDD HHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC PDFDINKARLVTTAPRICVRYECVPMRFIKHVYKIHTYAQDGCLFEGKTPVSAFLNSSYD CCCCCCCCEEEEECCCHHHEECHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHCCCCC GSFIAGLMELRYIQSLPVERIINYFESHGFTLKKPTAHKLMEKASSLFENLYKCIRQTAL HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHC SDPYKAADETYYKILVPEKNSKGKGVRKGYLWVVVGINTRMIYLLYDDGSRSEKVILNEL CCCHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHC GGCKGIIQSDGYSPYRKLESDAYPHITRIPCLQHIKRKFIDCGEDDPDAKRIVEMINTLY CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QNEHKHKIGVDGWTVEQNLVHRKKYAPDILGEIKDVLDDIEERGDLLPKSELKEAITYLR CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH NEWNAVVDIFNYGDTYLDNNIVERMNRYISLSRKNSLFFGSHKGAERGAILYTIALTCRM HHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEEEHHCC NKVNLFEYLTDIINRTAEWQPNTPLEKYRQLLPDRWEKAND CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]