| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is ynhA [C]
Identifier: 150003883
GI number: 150003883
Start: 1764917
End: 1765345
Strand: Reverse
Name: ynhA [C]
Synonym: BVU_1316
Alternate gene names: 150003883
Gene position: 1765345-1764917 (Counterclockwise)
Preceding gene: 150003884
Following gene: 150003881
Centisome position: 34.19
GC content: 44.29
Gene sequence:
>429_bases ATGAAAACAATAAACGAACTTCAGAACGAAGTGATAGAAGAGTTCAGTGATTTTGATGACTGGATGGACAAGTATCAATT GCTCATAGATTTGGGTAACGAGCAGGAACCACTCGCCCCCGAATATAAAACAGAACAAAACCTGATAGACGGTTGCCAGA GCCGCGTATGGCTGCAAGCCGATATGGAAGACGGCAAAGTGGTGTTCCAGGCGGAAAGTGACGCCTTGATTGTAAAAGGT ATCATTGCCCTGCTTATCAAAGTAGTCAGCGGACATACTCCGGATGAAATATTAAGCAGTGATTTATACTTTATAGAGAA GATAGGTTTGAAAGAACATCTGTCGCCCACCCGCAGCAATGGCTTGCTGGCAATGGTAAAACAGATGCGTATGTATGCGC TGGCTTTCAAGGCAAAAATGGCGAACTAG
Upstream 100 bases:
>100_bases CGGTAAACGATACGATGGAAAACATTGACCGTAACACGCTGAAAGCGGTAGGACAAACAGTGATGGATGTGATTTATAAT GAGAAATAAATGATAAAATA
Downstream 100 bases:
>100_bases TGATTAGTGGTTAGTGATTACTAACCACTAAAAAATCATCGTCCCAGCCGCTTGGTATCGACATCGGTACGTTTCTTCTC TTTGTATCCGCCGAATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKTINELQNEVIEEFSDFDDWMDKYQLLIDLGNEQEPLAPEYKTEQNLIDGCQSRVWLQADMEDGKVVFQAESDALIVKG IIALLIKVVSGHTPDEILSSDLYFIEKIGLKEHLSPTRSNGLLAMVKQMRMYALAFKAKMAN
Sequences:
>Translated_142_residues MKTINELQNEVIEEFSDFDDWMDKYQLLIDLGNEQEPLAPEYKTEQNLIDGCQSRVWLQADMEDGKVVFQAESDALIVKG IIALLIKVVSGHTPDEILSSDLYFIEKIGLKEHLSPTRSNGLLAMVKQMRMYALAFKAKMAN >Mature_142_residues MKTINELQNEVIEEFSDFDDWMDKYQLLIDLGNEQEPLAPEYKTEQNLIDGCQSRVWLQADMEDGKVVFQAESDALIVKG IIALLIKVVSGHTPDEILSSDLYFIEKIGLKEHLSPTRSNGLLAMVKQMRMYALAFKAKMAN
Specific function: Unknown
COG id: COG2166
COG function: function code R; SufE protein probably involved in Fe-S center assembly
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sufE family [H]
Homologues:
Organism=Escherichia coli, GI1787969, Length=118, Percent_Identity=38.135593220339, Blast_Score=82, Evalue=1e-17, Organism=Escherichia coli, GI1789176, Length=113, Percent_Identity=38.9380530973451, Blast_Score=80, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003808 [H]
Pfam domain/function: PF02657 SufE [H]
EC number: NA
Molecular weight: Translated: 16169; Mature: 16169
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTINELQNEVIEEFSDFDDWMDKYQLLIDLGNEQEPLAPEYKTEQNLIDGCQSRVWLQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEE DMEDGKVVFQAESDALIVKGIIALLIKVVSGHTPDEILSSDLYFIEKIGLKEHLSPTRSN CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCC GLLAMVKQMRMYALAFKAKMAN CHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTINELQNEVIEEFSDFDDWMDKYQLLIDLGNEQEPLAPEYKTEQNLIDGCQSRVWLQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEE DMEDGKVVFQAESDALIVKGIIALLIKVVSGHTPDEILSSDLYFIEKIGLKEHLSPTRSN CCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCC GLLAMVKQMRMYALAFKAKMAN CHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]