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The map label for this gene is ddpX [H]

Identifier: 150003878

GI number: 150003878

Start: 1758681

End: 1759346

Strand: Direct

Name: ddpX [H]

Synonym: BVU_1311

Alternate gene names: 150003878

Gene position: 1758681-1759346 (Clockwise)

Preceding gene: 150003877

Following gene: 150003879

Centisome position: 34.06

GC content: 45.95

Gene sequence:

>666_bases
ATGAAGTCTGTTTTTATTTTTATATCATTGCTGATAATGCTCTGTCCCGCTTTCTCGCAAAGCAGGATGGAGCATTATCT
TGATTCTTTGGGATTGGTGAATGTAGGCCGGATGGACCCGACATTGAAAATAGATTTGATGTATACCCGTGCCGACAATT
TTACCGGGAAAGTCCTTTATGAGGATTTGCAGGAGGCCTATCTTCATCCTGAGGCTGCCAAAGCCTTGTTGCAAGCGCAA
AAGCGGTTGAAAGAGTTGTATCCCGGTTATTCTCTGATTATTTATGATGCCGCCCGTCCCATGTCCGTGCAGCAGAAAAT
GTGGAATGTGGTAAAAGGTACTTCCCAAAATATATATGTATCCAATCCGGCCCGGGGAGGAGGGTTGCATAATTATGGTT
TGGCGGTGGATGTGAGTATTGCAGATGAAAAAGGAAATCCTTTGCCTATGGGGACCAAGGTGGATCATTTGGGCAAGGAA
GCACACATAGATACCGAAGCGGCAATGGTACAGCAGGGAATCATTACAGCGCAGGAACGGAAAAACCGTTTGCTGCTGCG
CCGGGTCATGACGGATGCGGGTTATAAACCTTTGCGCAGTGAGTGGTGGCATTTCAACTTCCGCAGTCGTGAAGAGGCAA
AACGGAACTATAAAGTAATTAGATAA

Upstream 100 bases:

>100_bases
CGGAAGGAAAGAAAATACTGAAGGAGATGGAATGCTGTAATATTGAGATTCCTGAGTTACTGAGGTCTGTATTATAATAG
TAAGAAAGATACCGCCGTAG

Downstream 100 bases:

>100_bases
AGGATGGAAATATCAACAAAAACACTCCATTTCATCGAAGAACACAGAGAGGACGATACGCGTACACTTGCTTTGCAAAG
TAAGAAATATCCCGATGTAG

Product: D-alanyl-D-alanine dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKSVFIFISLLIMLCPAFSQSRMEHYLDSLGLVNVGRMDPTLKIDLMYTRADNFTGKVLYEDLQEAYLHPEAAKALLQAQ
KRLKELYPGYSLIIYDAARPMSVQQKMWNVVKGTSQNIYVSNPARGGGLHNYGLAVDVSIADEKGNPLPMGTKVDHLGKE
AHIDTEAAMVQQGIITAQERKNRLLLRRVMTDAGYKPLRSEWWHFNFRSREEAKRNYKVIR

Sequences:

>Translated_221_residues
MKSVFIFISLLIMLCPAFSQSRMEHYLDSLGLVNVGRMDPTLKIDLMYTRADNFTGKVLYEDLQEAYLHPEAAKALLQAQ
KRLKELYPGYSLIIYDAARPMSVQQKMWNVVKGTSQNIYVSNPARGGGLHNYGLAVDVSIADEKGNPLPMGTKVDHLGKE
AHIDTEAAMVQQGIITAQERKNRLLLRRVMTDAGYKPLRSEWWHFNFRSREEAKRNYKVIR
>Mature_221_residues
MKSVFIFISLLIMLCPAFSQSRMEHYLDSLGLVNVGRMDPTLKIDLMYTRADNFTGKVLYEDLQEAYLHPEAAKALLQAQ
KRLKELYPGYSLIIYDAARPMSVQQKMWNVVKGTSQNIYVSNPARGGGLHNYGLAVDVSIADEKGNPLPMGTKVDHLGKE
AHIDTEAAMVQQGIITAQERKNRLLLRRVMTDAGYKPLRSEWWHFNFRSREEAKRNYKVIR

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

Organism=Escherichia coli, GI1787763, Length=180, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 25264; Mature: 25264

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVFIFISLLIMLCPAFSQSRMEHYLDSLGLVNVGRMDPTLKIDLMYTRADNFTGKVLY
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCCCEEEEEEEEEECCCCCHHHHH
EDLQEAYLHPEAAKALLQAQKRLKELYPGYSLIIYDAARPMSVQQKMWNVVKGTSQNIYV
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEE
SNPARGGGLHNYGLAVDVSIADEKGNPLPMGTKVDHLGKEAHIDTEAAMVQQGIITAQER
ECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCHHCCCHHHHHHHHHHHHHHHH
KNRLLLRRVMTDAGYKPLRSEWWHFNFRSREEAKRNYKVIR
HHHHHHHHHHHHCCCCCCHHHCEECCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MKSVFIFISLLIMLCPAFSQSRMEHYLDSLGLVNVGRMDPTLKIDLMYTRADNFTGKVLY
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCCCEEEEEEEEEECCCCCHHHHH
EDLQEAYLHPEAAKALLQAQKRLKELYPGYSLIIYDAARPMSVQQKMWNVVKGTSQNIYV
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEE
SNPARGGGLHNYGLAVDVSIADEKGNPLPMGTKVDHLGKEAHIDTEAAMVQQGIITAQER
ECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCHHCCCHHHHHHHHHHHHHHHH
KNRLLLRRVMTDAGYKPLRSEWWHFNFRSREEAKRNYKVIR
HHHHHHHHHHHHCCCCCCHHHCEECCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9751644 [H]