| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is trxA [H]
Identifier: 150003876
GI number: 150003876
Start: 1757793
End: 1758272
Strand: Direct
Name: trxA [H]
Synonym: BVU_1309
Alternate gene names: 150003876
Gene position: 1757793-1758272 (Clockwise)
Preceding gene: 150003875
Following gene: 150003877
Centisome position: 34.04
GC content: 41.25
Gene sequence:
>480_bases ATGAATAAAACGATTTTATTTTTTTTAGCCCTTGTGCTGGCTGCCACAACAGCTTGCGGCAGAGGAAGCAGTAATAATAA CCCTGTAAAAGAAGAAACTATGGCAACAGAAGGAAATGGAAAGGTCATACATTTGACTAAAGCTGAATTTTTGGCGAAAG TATATAATTTCGAGAAAAACCCGGAAGAGTGGAAATATGAAGGTGACAAACCGGCTATTGTGGATTTCTATGCTGACTGG TGTGGTCCTTGCAAAATGGTAGCTCCTATTTTGGACGAATTGGCAAAAGAATACGATGGCCAGATTGTGATTTATAAAGT GGACACGGAGAAAGAACAGGAACTGGCAGGCGCGTTTGGTATACGGAGTATTCCGTCCATTCTGTTCATCCCCATGGAAG GAAAGCCGGAGATGGCACAGGGGGCTATGCCCAAAGCGTCATTTAAAAAGGCTATTGATGAGTTTTTATTGAAAAAATAA
Upstream 100 bases:
>100_bases CTTCTCCTGTCAACAGTTCCATTTGGGGGGCGGCAATGGGGGGATTGTTGCTCAGTTCATTTATGCCGGAGCATAAAAAG ATAAAGAAGGAGGAATAAGT
Downstream 100 bases:
>100_bases GTACTTTTGTGCAATAGCATCAAGAAGAAAGAGCAATATGGAAACTTTATGTAAAATAAGAGATCTCTATCGCGCTATTG CAGAATTTGAAACACGGTTT
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNKTILFFLALVLAATTACGRGSSNNNPVKEETMATEGNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADW CGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLKK
Sequences:
>Translated_159_residues MNKTILFFLALVLAATTACGRGSSNNNPVKEETMATEGNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADW CGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLKK >Mature_159_residues MNKTILFFLALVLAATTACGRGSSNNNPVKEETMATEGNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADW CGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLKK
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788936, Length=88, Percent_Identity=45.4545454545455, Blast_Score=91, Evalue=4e-20, Organism=Escherichia coli, GI87082331, Length=116, Percent_Identity=37.0689655172414, Blast_Score=84, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71980562, Length=111, Percent_Identity=29.7297297297297, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17507705, Length=86, Percent_Identity=29.0697674418605, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321648, Length=86, Percent_Identity=37.2093023255814, Blast_Score=66, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323072, Length=84, Percent_Identity=36.9047619047619, Blast_Score=61, Evalue=9e-11, Organism=Drosophila melanogaster, GI24639826, Length=62, Percent_Identity=45.1612903225806, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI17530795, Length=74, Percent_Identity=36.4864864864865, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573567, Length=73, Percent_Identity=36.986301369863, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI17648013, Length=76, Percent_Identity=38.1578947368421, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24583090, Length=76, Percent_Identity=38.1578947368421, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24664269, Length=62, Percent_Identity=38.7096774193548, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 17688; Mature: 17688
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTILFFLALVLAATTACGRGSSNNNPVKEETMATEGNGKVIHLTKAEFLAKVYNFEKN CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCEEEEEHHHHHHHHHCCCCC PEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFG CHHCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHC IRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLKK HHCCCCEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNKTILFFLALVLAATTACGRGSSNNNPVKEETMATEGNGKVIHLTKAEFLAKVYNFEKN CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCEEEEEHHHHHHHHHCCCCC PEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFG CHHCCCCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHC IRSIPSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLKK HHCCCCEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]