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The map label for this gene is deoC [H]

Identifier: 150003777

GI number: 150003777

Start: 1629331

End: 1630278

Strand: Reverse

Name: deoC [H]

Synonym: BVU_1209

Alternate gene names: 150003777

Gene position: 1630278-1629331 (Counterclockwise)

Preceding gene: 150003778

Following gene: 150003775

Centisome position: 31.58

GC content: 44.2

Gene sequence:

>948_bases
ATGGAACATAATCACGAATTCGAAGGTGGACATGAACATCGTCATGACCACGATCATGGACCTGAGCACAGCAAGTACGA
AGAAGCACTTGCCAAGTATAACATCCGTTTGCACGATGAGGATGTAAAAGCGAAAACTGCCCTACTCATCGAAAAACATG
TAGCAGAAAACAATACACCGGACGTAAAGAAATTCCTGTTCCATTGCATTGACCTAACCACTTTAAAGTGTACTGATTCA
GATGAAAGTGTAATGAAATTCACCGGAAAAGTAAATGAATTTGTTGACAAGTACCCCGATCTGGACAATGTAGCCGCAAT
CTGTGTATATCCTAATATGGCAGAAGTAGTCAACGACACCTTGGAAGCAGATCATGTAAACATAGCCTGTGTATCGGGCG
GTTTTCCCTCCTCGCAAACCTTTACCGAAGTAAAGGTAGCCGAAACAGCCATGGCTCTCCATACCGGAGCCGATGAGATA
GATATCGTTATCCCGGTAGGCAAGTTCCTGAGTGGGGATTACGAAGGAATGTGTGATGAAATAGAAGAATTAAAAGCTGT
ATGTGGTGAGCATCACCTGAAAGTGATCTTGGAAACCGGAGCACTGGGAAGCGCATCCAACATCAAAAAAGCGTCTATTC
TATCGATGTATTCCGGAGCCGATTTCATCAAAACCTCTACTGGAAAGGAAAACCCCGCCGCTACTCCTGAAGCCGCCTTG
GTGATGTGCGAGGCTATCAAAGAATACTATATGACAACAGGCCGCAAAGTAGGATTCAAACCCGCCGGAGGAATTAATAC
CGTACACGATGCTTTGGTTTACTATACCATTGTAAAAGAAGTGTTAGGTGAAGAATGGCTGACAAACGAGTTATTCCGCT
TAGGAACAAGCCGCCTGGCCAATCTGCTTCTCTCAGAAATTGTAGGTCAAGAAACCAAGTTCTTCTAA

Upstream 100 bases:

>100_bases
GACCGGAGTAAACCTGACCGAAGCCTTCCGTCAAAACTTGGAGAAGAAAACAAATAGAGATAAAGACAGACATAAAAACA
ATCCCAAATTATAAAGAATT

Downstream 100 bases:

>100_bases
ACAAAGAACTGTTTCACTATTTAAATAACAACCACATTTAAAGTGACCGGAATGAGCTTTATCTATTCCGGTTATTTTAA
AGGTAAACCTTCTACCAAAG

Product: putative deoxyribose-phosphate aldolase

Products: NA

Alternate protein names: Phosphodeoxyriboaldolase; DERA; Deoxyriboaldolase [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MEHNHEFEGGHEHRHDHDHGPEHSKYEEALAKYNIRLHDEDVKAKTALLIEKHVAENNTPDVKKFLFHCIDLTTLKCTDS
DESVMKFTGKVNEFVDKYPDLDNVAAICVYPNMAEVVNDTLEADHVNIACVSGGFPSSQTFTEVKVAETAMALHTGADEI
DIVIPVGKFLSGDYEGMCDEIEELKAVCGEHHLKVILETGALGSASNIKKASILSMYSGADFIKTSTGKENPAATPEAAL
VMCEAIKEYYMTTGRKVGFKPAGGINTVHDALVYYTIVKEVLGEEWLTNELFRLGTSRLANLLLSEIVGQETKFF

Sequences:

>Translated_315_residues
MEHNHEFEGGHEHRHDHDHGPEHSKYEEALAKYNIRLHDEDVKAKTALLIEKHVAENNTPDVKKFLFHCIDLTTLKCTDS
DESVMKFTGKVNEFVDKYPDLDNVAAICVYPNMAEVVNDTLEADHVNIACVSGGFPSSQTFTEVKVAETAMALHTGADEI
DIVIPVGKFLSGDYEGMCDEIEELKAVCGEHHLKVILETGALGSASNIKKASILSMYSGADFIKTSTGKENPAATPEAAL
VMCEAIKEYYMTTGRKVGFKPAGGINTVHDALVYYTIVKEVLGEEWLTNELFRLGTSRLANLLLSEIVGQETKFF
>Mature_315_residues
MEHNHEFEGGHEHRHDHDHGPEHSKYEEALAKYNIRLHDEDVKAKTALLIEKHVAENNTPDVKKFLFHCIDLTTLKCTDS
DESVMKFTGKVNEFVDKYPDLDNVAAICVYPNMAEVVNDTLEADHVNIACVSGGFPSSQTFTEVKVAETAMALHTGADEI
DIVIPVGKFLSGDYEGMCDEIEELKAVCGEHHLKVILETGALGSASNIKKASILSMYSGADFIKTSTGKENPAATPEAAL
VMCEAIKEYYMTTGRKVGFKPAGGINTVHDALVYYTIVKEVLGEEWLTNELFRLGTSRLANLLLSEIVGQETKFF

Specific function: Nucleotide and deoxyribonucleotide catabolism. [C]

COG id: COG0274

COG function: function code F; Deoxyribose-phosphate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the deoC/fbaB aldolase family. DeoC type 2 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116063554, Length=256, Percent_Identity=42.96875, Blast_Score=201, Evalue=6e-52,
Organism=Escherichia coli, GI1790841, Length=234, Percent_Identity=38.8888888888889, Blast_Score=142, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17533015, Length=245, Percent_Identity=44.4897959183673, Blast_Score=194, Evalue=3e-50,
Organism=Drosophila melanogaster, GI19922098, Length=291, Percent_Identity=38.4879725085911, Blast_Score=176, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011343
- InterPro:   IPR002915 [H]

Pfam domain/function: PF01791 DeoC [H]

EC number: =4.1.2.4 [H]

Molecular weight: Translated: 34797; Mature: 34797

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHNHEFEGGHEHRHDHDHGPEHSKYEEALAKYNIRLHDEDVKAKTALLIEKHVAENNTP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCH
DVKKFLFHCIDLTTLKCTDSDESVMKFTGKVNEFVDKYPDLDNVAAICVYPNMAEVVNDT
HHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH
LEADHVNIACVSGGFPSSQTFTEVKVAETAMALHTGADEIDIVIPVGKFLSGDYEGMCDE
HCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCHHHHHHH
IEELKAVCGEHHLKVILETGALGSASNIKKASILSMYSGADFIKTSTGKENPAATPEAAL
HHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCHHHHH
VMCEAIKEYYMTTGRKVGFKPAGGINTVHDALVYYTIVKEVLGEEWLTNELFRLGTSRLA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLLSEIVGQETKFF
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MEHNHEFEGGHEHRHDHDHGPEHSKYEEALAKYNIRLHDEDVKAKTALLIEKHVAENNTP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCH
DVKKFLFHCIDLTTLKCTDSDESVMKFTGKVNEFVDKYPDLDNVAAICVYPNMAEVVNDT
HHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH
LEADHVNIACVSGGFPSSQTFTEVKVAETAMALHTGADEIDIVIPVGKFLSGDYEGMCDE
HCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCHHHHHHH
IEELKAVCGEHHLKVILETGALGSASNIKKASILSMYSGADFIKTSTGKENPAATPEAAL
HHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCHHHHH
VMCEAIKEYYMTTGRKVGFKPAGGINTVHDALVYYTIVKEVLGEEWLTNELFRLGTSRLA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLLLSEIVGQETKFF
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA