| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is nahA [H]
Identifier: 150003764
GI number: 150003764
Start: 1612735
End: 1614714
Strand: Direct
Name: nahA [H]
Synonym: BVU_1196
Alternate gene names: 150003764
Gene position: 1612735-1614714 (Clockwise)
Preceding gene: 150003763
Following gene: 150003765
Centisome position: 31.24
GC content: 46.11
Gene sequence:
>1980_bases ATGAAACACTTACTAACCTTATGGATGTTGGCCTTGTGTCTGTGTGTTTCGGCCAAGGAAACATGTCCGAAAGTAATTCC CGCCCTGCAAGAGTGGAAGGGGGGAAGTGGAAAACTCGTATTGCCTGCTGAAGGCAGTATTGTTGTAGCTCCTGCCGATG AGGCGGCACTGAAAAGTGTGGCGACTGTGCTGGCACAGGACTTGAAAGATCTGTTGGATTGGAACTACACCATTAGGACC GGGAAACCGGGAAAGAATGATATTTATCTTTCATTGATGAAACCCGACAAACAATTGGGAAAGGAAGGGTATGTGCTGAC TGCCGGACGCTATGCCGGTATTGAAGCACCGGCTCGTCAGGGAGTCTTTTGGGGAACCCGGAGTTTGTTGCAGATTCTTT ATAATGAAAAAGGACAGTTGCCCAAAGGAGTTGCCCGTGACTGGCCGCAATATCCCAGTCGTGGCTTCATGCTGGATGTG GGCCGTAAGTTCTTCACAATGGATTTCCTGCGGCAATATGTCAAAATACTATCGTTCTATAAACTGAATGAATTCCAGAT TCATCTCAATGACAATGGTTTTGTACAGTTCTTTGATAACGACTGGAACAAGACCTATGCTGCTTTCCGCCTGGAGAGTG AGCGTTTTCCGGGGCTGACCGCCAAGGATGGTTCTTATACCAAGAAAGAATTCACCGACCTGCAACGTCTGGGCATGGAA TATGGTGTGAATGTGATTCCGGAGATTGATATTCCGGCTCATTCATTGGCCTTTACACATTATAAACCCGAGATAGGCAG TGATAAATATGGAATGGATCATTTGGATTTGTACAAGGAGGAAACCTATCGTTTTGTAGATTCTTTGCTGGATGAGTATC TTTCTGGTGAGAAACCGGTTTTCATAGGTCCCGACGTACATATCGGTACAGACGAGTACAATGCCAAGGAAGCTGAGAAA TTCCGCTATTTTACAGACCGGTATCTGAAGTATGTAGAGAAATACGGGAAGAATGTCCGTATGTGGGGAGCACTGCGCTG GTTGAAAGGAAACATTCCGGTGAAAGCGGATAATGTAACTATTAATGCCTGGTCATACGATTGGATTGATCCTAATGCTT CTTTGAAAGACGGATATAAGATTATCAATACGTGTGATGCTTATCTTTATATTGTTCCGGCTGCCGGATATTATCGTGAT TTCCTGGACACGAAATGGCTGTATGAGCAATGGCGTGTGGGTAAAGTGAATCCTAAGGAAGAGTTGCCTGAAGGAACTCC GGGACTGTTGGGAGGTATGTTTGCCGTATGGAATGACCATTGTGGTAACGGTGTGTCACAACAGGATGTGCATTTCCGTA CATTCCCGGCCGCTCAGGTACTGGCCGAGAAGATGTGGAGAGGGAAGAATGAAATGGTTTCTTACGAGGAATTTGAGGAA TTGTGCAAACAGATGCCTGAAGCTCCCGGTGTCAACCTGCTGGGGCGTGTGCAGGGTGAGGTAGTCCTTCCGGGGCAGAA TGAAGAACTGTCTTTGAACGGTACGGACAGCATTGCCACTATGTTGCCGGAGGTAGGCTATCCATACGTGGTAGAATTTG AAATAAATCCGGACAAAGACCAAAATATCAACGGTATTTTGTTTAAAGGTCCTCATTCCACCGTATATGCCAATTGGGAA AATAAGGGAAAATTGGCTTTCAGCCGTGACGGCTATACGTTTGTATTCCACGCTGCCACACTGCCTGCCGGAGCATGGAC GAAGGTACGCATAGAGGGAGACCACAAAGGTACTACTCTTTACATAAACGGTGAGAAAGCGGAACGTTTGGAAGGACGTG TCAAGCAGTTTTACAACTATACTCATAAACGCAAGGACAAGATGTATATGCAGGAAACTTTGGTGTTTCCCATGCGGCAG ATTGGGGATGTGCAGAATGGGTTCAGAGGGAAGTTGCGGAATATAAATTGCACGCAATAA
Upstream 100 bases:
>100_bases GAAGCATTGAATAAACTGAATGATATCAAGAAGATAGTAAAAGGCAAATAAATGCCTTCATTTTTCATTAACCGTTAATT ACTAACCATTAATCATTATC
Downstream 100 bases:
>100_bases AAGATATTTCTTTCTCTTGCTGTGTAGGGGCAGGTTTTAGACCTGTCCCTATGCCCAATAGGAGTGAAATTTCTCCGAAT GTTATCTTTAATAGTGTTAT
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MKHLLTLWMLALCLCVSAKETCPKVIPALQEWKGGSGKLVLPAEGSIVVAPADEAALKSVATVLAQDLKDLLDWNYTIRT GKPGKNDIYLSLMKPDKQLGKEGYVLTAGRYAGIEAPARQGVFWGTRSLLQILYNEKGQLPKGVARDWPQYPSRGFMLDV GRKFFTMDFLRQYVKILSFYKLNEFQIHLNDNGFVQFFDNDWNKTYAAFRLESERFPGLTAKDGSYTKKEFTDLQRLGME YGVNVIPEIDIPAHSLAFTHYKPEIGSDKYGMDHLDLYKEETYRFVDSLLDEYLSGEKPVFIGPDVHIGTDEYNAKEAEK FRYFTDRYLKYVEKYGKNVRMWGALRWLKGNIPVKADNVTINAWSYDWIDPNASLKDGYKIINTCDAYLYIVPAAGYYRD FLDTKWLYEQWRVGKVNPKEELPEGTPGLLGGMFAVWNDHCGNGVSQQDVHFRTFPAAQVLAEKMWRGKNEMVSYEEFEE LCKQMPEAPGVNLLGRVQGEVVLPGQNEELSLNGTDSIATMLPEVGYPYVVEFEINPDKDQNINGILFKGPHSTVYANWE NKGKLAFSRDGYTFVFHAATLPAGAWTKVRIEGDHKGTTLYINGEKAERLEGRVKQFYNYTHKRKDKMYMQETLVFPMRQ IGDVQNGFRGKLRNINCTQ
Sequences:
>Translated_659_residues MKHLLTLWMLALCLCVSAKETCPKVIPALQEWKGGSGKLVLPAEGSIVVAPADEAALKSVATVLAQDLKDLLDWNYTIRT GKPGKNDIYLSLMKPDKQLGKEGYVLTAGRYAGIEAPARQGVFWGTRSLLQILYNEKGQLPKGVARDWPQYPSRGFMLDV GRKFFTMDFLRQYVKILSFYKLNEFQIHLNDNGFVQFFDNDWNKTYAAFRLESERFPGLTAKDGSYTKKEFTDLQRLGME YGVNVIPEIDIPAHSLAFTHYKPEIGSDKYGMDHLDLYKEETYRFVDSLLDEYLSGEKPVFIGPDVHIGTDEYNAKEAEK FRYFTDRYLKYVEKYGKNVRMWGALRWLKGNIPVKADNVTINAWSYDWIDPNASLKDGYKIINTCDAYLYIVPAAGYYRD FLDTKWLYEQWRVGKVNPKEELPEGTPGLLGGMFAVWNDHCGNGVSQQDVHFRTFPAAQVLAEKMWRGKNEMVSYEEFEE LCKQMPEAPGVNLLGRVQGEVVLPGQNEELSLNGTDSIATMLPEVGYPYVVEFEINPDKDQNINGILFKGPHSTVYANWE NKGKLAFSRDGYTFVFHAATLPAGAWTKVRIEGDHKGTTLYINGEKAERLEGRVKQFYNYTHKRKDKMYMQETLVFPMRQ IGDVQNGFRGKLRNINCTQ >Mature_659_residues MKHLLTLWMLALCLCVSAKETCPKVIPALQEWKGGSGKLVLPAEGSIVVAPADEAALKSVATVLAQDLKDLLDWNYTIRT GKPGKNDIYLSLMKPDKQLGKEGYVLTAGRYAGIEAPARQGVFWGTRSLLQILYNEKGQLPKGVARDWPQYPSRGFMLDV GRKFFTMDFLRQYVKILSFYKLNEFQIHLNDNGFVQFFDNDWNKTYAAFRLESERFPGLTAKDGSYTKKEFTDLQRLGME YGVNVIPEIDIPAHSLAFTHYKPEIGSDKYGMDHLDLYKEETYRFVDSLLDEYLSGEKPVFIGPDVHIGTDEYNAKEAEK FRYFTDRYLKYVEKYGKNVRMWGALRWLKGNIPVKADNVTINAWSYDWIDPNASLKDGYKIINTCDAYLYIVPAAGYYRD FLDTKWLYEQWRVGKVNPKEELPEGTPGLLGGMFAVWNDHCGNGVSQQDVHFRTFPAAQVLAEKMWRGKNEMVSYEEFEE LCKQMPEAPGVNLLGRVQGEVVLPGQNEELSLNGTDSIATMLPEVGYPYVVEFEINPDKDQNINGILFKGPHSTVYANWE NKGKLAFSRDGYTFVFHAATLPAGAWTKVRIEGDHKGTTLYINGEKAERLEGRVKQFYNYTHKRKDKMYMQETLVFPMRQ IGDVQNGFRGKLRNINCTQ
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI189181666, Length=371, Percent_Identity=23.4501347708895, Blast_Score=68, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17569815, Length=431, Percent_Identity=22.2737819025522, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24653074, Length=410, Percent_Identity=23.1707317073171, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI45551090, Length=410, Percent_Identity=23.1707317073171, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 75342; Mature: 75342
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLLTLWMLALCLCVSAKETCPKVIPALQEWKGGSGKLVLPAEGSIVVAPADEAALKSV CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHH ATVLAQDLKDLLDWNYTIRTGKPGKNDIYLSLMKPDKQLGKEGYVLTAGRYAGIEAPARQ HHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCHHHHCCCCEEEEECCCCCCCCCHHC GVFWGTRSLLQILYNEKGQLPKGVARDWPQYPSRGFMLDVGRKFFTMDFLRQYVKILSFY CCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHE KLNEFQIHLNDNGFVQFFDNDWNKTYAAFRLESERFPGLTAKDGSYTKKEFTDLQRLGME ECCEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH YGVNVIPEIDIPAHSLAFTHYKPEIGSDKYGMDHLDLYKEETYRFVDSLLDEYLSGEKPV HCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE FIGPDVHIGTDEYNAKEAEKFRYFTDRYLKYVEKYGKNVRMWGALRWLKGNIPVKADNVT EECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCEEECCEE INAWSYDWIDPNASLKDGYKIINTCDAYLYIVPAAGYYRDFLDTKWLYEQWRVGKVNPKE EEEEEEECCCCCCCHHCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHH ELPEGTPGLLGGMFAVWNDHCGNGVSQQDVHFRTFPAAQVLAEKMWRGKNEMVSYEEFEE HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHH LCKQMPEAPGVNLLGRVQGEVVLPGQNEELSLNGTDSIATMLPEVGYPYVVEFEINPDKD HHHHCCCCCCCCEEEECCCCEEECCCCCEEEECCCHHHHHHHHCCCCCEEEEEEECCCCC QNINGILFKGPHSTVYANWENKGKLAFSRDGYTFVFHAATLPAGAWTKVRIEGDHKGTTL CCCCEEEEECCCCEEEECCCCCCCEEEECCCEEEEEEEEECCCCCEEEEEEECCCCCEEE YINGEKAERLEGRVKQFYNYTHKRKDKMYMQETLVFPMRQIGDVQNGFRGKLRNINCTQ EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKHLLTLWMLALCLCVSAKETCPKVIPALQEWKGGSGKLVLPAEGSIVVAPADEAALKSV CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHH ATVLAQDLKDLLDWNYTIRTGKPGKNDIYLSLMKPDKQLGKEGYVLTAGRYAGIEAPARQ HHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCHHHHCCCCEEEEECCCCCCCCCHHC GVFWGTRSLLQILYNEKGQLPKGVARDWPQYPSRGFMLDVGRKFFTMDFLRQYVKILSFY CCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHE KLNEFQIHLNDNGFVQFFDNDWNKTYAAFRLESERFPGLTAKDGSYTKKEFTDLQRLGME ECCEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH YGVNVIPEIDIPAHSLAFTHYKPEIGSDKYGMDHLDLYKEETYRFVDSLLDEYLSGEKPV HCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE FIGPDVHIGTDEYNAKEAEKFRYFTDRYLKYVEKYGKNVRMWGALRWLKGNIPVKADNVT EECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCEEECCEE INAWSYDWIDPNASLKDGYKIINTCDAYLYIVPAAGYYRDFLDTKWLYEQWRVGKVNPKE EEEEEEECCCCCCCHHCCHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHH ELPEGTPGLLGGMFAVWNDHCGNGVSQQDVHFRTFPAAQVLAEKMWRGKNEMVSYEEFEE HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHH LCKQMPEAPGVNLLGRVQGEVVLPGQNEELSLNGTDSIATMLPEVGYPYVVEFEINPDKD HHHHCCCCCCCCEEEECCCCEEECCCCCEEEECCCHHHHHHHHCCCCCEEEEEEECCCCC QNINGILFKGPHSTVYANWENKGKLAFSRDGYTFVFHAATLPAGAWTKVRIEGDHKGTTL CCCCEEEEECCCCEEEECCCCCCCEEEECCCEEEEEEEEECCCCCEEEEEEECCCCCEEE YINGEKAERLEGRVKQFYNYTHKRKDKMYMQETLVFPMRQIGDVQNGFRGKLRNINCTQ EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]