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The map label for this gene is ydiF [H]

Identifier: 150003730

GI number: 150003730

Start: 1574757

End: 1576349

Strand: Direct

Name: ydiF [H]

Synonym: BVU_1161

Alternate gene names: 150003730

Gene position: 1574757-1576349 (Clockwise)

Preceding gene: 150003729

Following gene: 150003734

Centisome position: 30.5

GC content: 39.49

Gene sequence:

>1593_bases
ATGTGTATACATGTACAGTCCATTACTTACATGCATCCGGATAAAGATGTGCTTTTCAGTAATGTCAGTTTTACTATCAG
TAAAGGGCAAAAAGTAGCCCTCATCGGAAACAACGGTTCGGGAAAATCTACCTTGATGCGATTGATAACTAAAGAGCTAT
TACCTTCTGAAGGACAAATTATATGTCCGGATATCCCCTATTCTATTCCACAGCATTTTGGTCAGTTTAATCATTTGACA
GTAGCCGGGGCATTGGGAATAGAAAGAAAGTTATATGCACTTCATGCCATTTTACAGGGAGATGCTTCGATAGAGCATTT
TACGGCTTTGGCGGATGACTGGAAAATAGAAGAGAAAGCGGTTGCTGCTTTGAATGAATGGGGGTTGGTAGGAGTACCTC
TTTCCTATCCCATGCATTTGTTGAGTGGCGGTGAGAAAACAAAAGTTTTTCTAGCAGGAATTACTATATACTCTCCTGCT
TTTATTTTGATGGATGAGCCTACCAATCATTTGGATGACGAAAGCCGTATCCGGCTGTACCGTTTTATAACTACTGCTGC
AGCAGGGATACTGGTTGTCAGCCATGACCGGACATTACTCAATTTACTTTCTTCTACCTATGAGCTTACTGCAAAAGGTG
TCACTTATTATGCTGGAAATTACGATTTCTATAAAGAACAGAAGAAATTGGCTGTAGAAGCTCTGCAAACCCGGTTGAAG
GAGAATGAAAAGCAATTACAAAAAGCCCGAAAGCAGGCACGTGAGGTAATGGAGCGTCAACAAAAGCATGATGTGCGAGG
TAAAAAACAAAATGTGAAGAAAGGAGTCGGAAAGATGGCAATGCATACATTCAGGGATCAGGCTGAGAAAAGTACTGTCC
GTTTAGGAGATGTTCATGCTGATAAGATCCGTTTTTTGGCAGGAGAAACAGTAGAACTGCATAAAGCTTTACCTGATATG
AAGGCGATGAAAGTAAATTTCAATTCATCTTCTTTGCATATCGGTAAGATACTTATCGTAGCTTCAAGTGTGAATTATTC
GTATGGAGAAAATCCTTTGTGGTCTTCTCCTCTTGAGTTTACCATCAAAAGTGGTGACCGTATTCATTTGAAAGGAAGTA
ATGGTAGTGGTAAAACAACTTTATTGAGGTTGATAACCGGAAGTCTTGCTCCTACTCAAGGTTCTTTGATACAGGCAGAA
GGGCTGACGTACGTTTATCTTGATCAGGAATATTCTATAATTCGTAATGATTTGTCGGTATTGGAACAACTTGCCTTATT
CAATAGTGAATTGTATGATAATGAATTGAGAACGATTCTCAACCGTTTTTTGTTTCCTGTTTCCACATGGAACAAGAAGT
GTAGCTATCTGAGTGGAGGTGAGAAGATGAAACTTTCTCTCTGTTGTCTTATGGTGAGTGCACAGGCCCCCGATGTTTTT
ATTGTGGATGAACCTACTAATAATATTGATATTCTGAGTATGGAGATATTGACCGAAACTTTGAAGGATTATCAAGGCAC
TTTGTTGGTGGTGAGTCATGACAACTATTTTGTGCAACAAATAAAGGCAGATAAGCAGATTGAGTTGTTCTGA

Upstream 100 bases:

>100_bases
GGGACAGCAGGCGAAATAATTTCGTTTGTTGCGCAATAGTTGTCTTCTTATTCCAACTACGAACTTTTCAGTATTCATAT
TTAAAATTCTTAGAAAGAGT

Downstream 100 bases:

>100_bases
TGTTTTTATTTTGTCAAGTGCGGCATTTTTGTTTTAAATATAGAATTTGACAAAAATGCCGCAGACTTGATTTATTTTAT
TCGGAGTTATTATTGCAGTG

Product: putative ATP-binding ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MCIHVQSITYMHPDKDVLFSNVSFTISKGQKVALIGNNGSGKSTLMRLITKELLPSEGQIICPDIPYSIPQHFGQFNHLT
VAGALGIERKLYALHAILQGDASIEHFTALADDWKIEEKAVAALNEWGLVGVPLSYPMHLLSGGEKTKVFLAGITIYSPA
FILMDEPTNHLDDESRIRLYRFITTAAAGILVVSHDRTLLNLLSSTYELTAKGVTYYAGNYDFYKEQKKLAVEALQTRLK
ENEKQLQKARKQAREVMERQQKHDVRGKKQNVKKGVGKMAMHTFRDQAEKSTVRLGDVHADKIRFLAGETVELHKALPDM
KAMKVNFNSSSLHIGKILIVASSVNYSYGENPLWSSPLEFTIKSGDRIHLKGSNGSGKTTLLRLITGSLAPTQGSLIQAE
GLTYVYLDQEYSIIRNDLSVLEQLALFNSELYDNELRTILNRFLFPVSTWNKKCSYLSGGEKMKLSLCCLMVSAQAPDVF
IVDEPTNNIDILSMEILTETLKDYQGTLLVVSHDNYFVQQIKADKQIELF

Sequences:

>Translated_530_residues
MCIHVQSITYMHPDKDVLFSNVSFTISKGQKVALIGNNGSGKSTLMRLITKELLPSEGQIICPDIPYSIPQHFGQFNHLT
VAGALGIERKLYALHAILQGDASIEHFTALADDWKIEEKAVAALNEWGLVGVPLSYPMHLLSGGEKTKVFLAGITIYSPA
FILMDEPTNHLDDESRIRLYRFITTAAAGILVVSHDRTLLNLLSSTYELTAKGVTYYAGNYDFYKEQKKLAVEALQTRLK
ENEKQLQKARKQAREVMERQQKHDVRGKKQNVKKGVGKMAMHTFRDQAEKSTVRLGDVHADKIRFLAGETVELHKALPDM
KAMKVNFNSSSLHIGKILIVASSVNYSYGENPLWSSPLEFTIKSGDRIHLKGSNGSGKTTLLRLITGSLAPTQGSLIQAE
GLTYVYLDQEYSIIRNDLSVLEQLALFNSELYDNELRTILNRFLFPVSTWNKKCSYLSGGEKMKLSLCCLMVSAQAPDVF
IVDEPTNNIDILSMEILTETLKDYQGTLLVVSHDNYFVQQIKADKQIELF
>Mature_530_residues
MCIHVQSITYMHPDKDVLFSNVSFTISKGQKVALIGNNGSGKSTLMRLITKELLPSEGQIICPDIPYSIPQHFGQFNHLT
VAGALGIERKLYALHAILQGDASIEHFTALADDWKIEEKAVAALNEWGLVGVPLSYPMHLLSGGEKTKVFLAGITIYSPA
FILMDEPTNHLDDESRIRLYRFITTAAAGILVVSHDRTLLNLLSSTYELTAKGVTYYAGNYDFYKEQKKLAVEALQTRLK
ENEKQLQKARKQAREVMERQQKHDVRGKKQNVKKGVGKMAMHTFRDQAEKSTVRLGDVHADKIRFLAGETVELHKALPDM
KAMKVNFNSSSLHIGKILIVASSVNYSYGENPLWSSPLEFTIKSGDRIHLKGSNGSGKTTLLRLITGSLAPTQGSLIQAE
GLTYVYLDQEYSIIRNDLSVLEQLALFNSELYDNELRTILNRFLFPVSTWNKKCSYLSGGEKMKLSLCCLMVSAQAPDVF
IVDEPTNNIDILSMEILTETLKDYQGTLLVVSHDNYFVQQIKADKQIELF

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=519, Percent_Identity=26.7822736030828, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI27881506, Length=522, Percent_Identity=27.0114942528736, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=24.8587570621469, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI69354671, Length=531, Percent_Identity=28.6252354048964, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=28.6252354048964, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI27477115, Length=194, Percent_Identity=28.3505154639175, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI6005701, Length=187, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1789751, Length=525, Percent_Identity=28, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI1787041, Length=541, Percent_Identity=28.6506469500924, Blast_Score=174, Evalue=2e-44,
Organism=Escherichia coli, GI2367384, Length=548, Percent_Identity=28.4671532846715, Blast_Score=162, Evalue=4e-41,
Organism=Escherichia coli, GI1787182, Length=528, Percent_Identity=28.7878787878788, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1789873, Length=202, Percent_Identity=29.7029702970297, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI87081834, Length=209, Percent_Identity=29.1866028708134, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1790739, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787547, Length=161, Percent_Identity=29.1925465838509, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786345, Length=211, Percent_Identity=28.9099526066351, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI87081782, Length=190, Percent_Identity=27.3684210526316, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI87081709, Length=232, Percent_Identity=26.7241379310345, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786803, Length=180, Percent_Identity=27.7777777777778, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1786253, Length=190, Percent_Identity=28.4210526315789, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=519, Percent_Identity=26.9749518304432, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=26.8518518518519, Blast_Score=147, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17553372, Length=528, Percent_Identity=25, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71992285, Length=191, Percent_Identity=29.8429319371728, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193208177, Length=208, Percent_Identity=26.4423076923077, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=288, Percent_Identity=24.3055555555556, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992290, Length=183, Percent_Identity=28.4153005464481, Blast_Score=66, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=541, Percent_Identity=24.5841035120148, Blast_Score=130, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6321121, Length=567, Percent_Identity=24.1622574955908, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=163, Percent_Identity=32.5153374233129, Blast_Score=71, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6325030, Length=193, Percent_Identity=30.5699481865285, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323278, Length=167, Percent_Identity=30.5389221556886, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24641342, Length=529, Percent_Identity=27.9773156899811, Blast_Score=156, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24666836, Length=532, Percent_Identity=26.3157894736842, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24642252, Length=542, Percent_Identity=26.0147601476015, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI18859989, Length=542, Percent_Identity=26.0147601476015, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI21357907, Length=182, Percent_Identity=28.021978021978, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59357; Mature: 59357

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS00189 LIPOYL ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2 ; PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIHVQSITYMHPDKDVLFSNVSFTISKGQKVALIGNNGSGKSTLMRLITKELLPSEGQI
CEEEEEEEEEECCCHHHEEECCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
ICPDIPYSIPQHFGQFNHLTVAGALGIERKLYALHAILQGDASIEHFTALADDWKIEEKA
ECCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
VAALNEWGLVGVPLSYPMHLLSGGEKTKVFLAGITIYSPAFILMDEPTNHLDDESRIRLY
HHHHHCCCEEECCHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHH
RFITTAAAGILVVSHDRTLLNLLSSTYELTAKGVTYYAGNYDFYKEQKKLAVEALQTRLK
HHHHHHHCEEEEEECCHHHHHHHHHHHEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHH
ENEKQLQKARKQAREVMERQQKHDVRGKKQNVKKGVGKMAMHTFRDQAEKSTVRLGDVHA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCH
DKIRFLAGETVELHKALPDMKAMKVNFNSSSLHIGKILIVASSVNYSYGENPLWSSPLEF
HHHHEECCCCHHHHHHCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEE
TIKSGDRIHLKGSNGSGKTTLLRLITGSLAPTQGSLIQAEGLTYVYLDQEYSIIRNDLSV
EEECCCEEEEECCCCCCHHHHHEEHHCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHHH
LEQLALFNSELYDNELRTILNRFLFPVSTWNKKCSYLSGGEKMKLSLCCLMVSAQAPDVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEE
IVDEPTNNIDILSMEILTETLKDYQGTLLVVSHDNYFVQQIKADKQIELF
EEECCCCCEEEEEHHHHHHHHHHCCCEEEEEECCCCEEHHHCCCCCEECC
>Mature Secondary Structure
MCIHVQSITYMHPDKDVLFSNVSFTISKGQKVALIGNNGSGKSTLMRLITKELLPSEGQI
CEEEEEEEEEECCCHHHEEECCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCE
ICPDIPYSIPQHFGQFNHLTVAGALGIERKLYALHAILQGDASIEHFTALADDWKIEEKA
ECCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH
VAALNEWGLVGVPLSYPMHLLSGGEKTKVFLAGITIYSPAFILMDEPTNHLDDESRIRLY
HHHHHCCCEEECCHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHH
RFITTAAAGILVVSHDRTLLNLLSSTYELTAKGVTYYAGNYDFYKEQKKLAVEALQTRLK
HHHHHHHCEEEEEECCHHHHHHHHHHHEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHH
ENEKQLQKARKQAREVMERQQKHDVRGKKQNVKKGVGKMAMHTFRDQAEKSTVRLGDVHA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCH
DKIRFLAGETVELHKALPDMKAMKVNFNSSSLHIGKILIVASSVNYSYGENPLWSSPLEF
HHHHEECCCCHHHHHHCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCEE
TIKSGDRIHLKGSNGSGKTTLLRLITGSLAPTQGSLIQAEGLTYVYLDQEYSIIRNDLSV
EEECCCEEEEECCCCCCHHHHHEEHHCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHHH
LEQLALFNSELYDNELRTILNRFLFPVSTWNKKCSYLSGGEKMKLSLCCLMVSAQAPDVF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEE
IVDEPTNNIDILSMEILTETLKDYQGTLLVVSHDNYFVQQIKADKQIELF
EEECCCCCEEEEEHHHHHHHHHHCCCEEEEEECCCCEEHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]