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The map label for this gene is ydeN [H]

Identifier: 150003728

GI number: 150003728

Start: 1571442

End: 1572863

Strand: Direct

Name: ydeN [H]

Synonym: BVU_1159

Alternate gene names: 150003728

Gene position: 1571442-1572863 (Clockwise)

Preceding gene: 150003727

Following gene: 150003729

Centisome position: 30.44

GC content: 38.75

Gene sequence:

>1422_bases
ATGAGATTTCAGAAAATAGGATTGACTACTGTAGTGTTGTGTACCGTAGGAATACAACAGAGCTTTTCTATCGATATAGT
TACAAAAGAAAAACCTAATATCGTGTTTATTTTGGCTGATGATTTAGGTTGGACGGATTTGGGTGTAATGGGCAGTGATT
ATTATGAAACTCCTAATATAGACCGTCTTGCTACAGAAGGAATATTGTTTGACAATGCTTACGCTGCAGCCGCCAATTCA
GCACCTAGCCGTGCTTGTATGATGACAGGAATGTACACGCCACGCCATGGAGTATATACAGTTAGTCCTCCCGACCGTGG
TGATCGTACCAAACGTAAATATATAGCTATTCCCAATGTAGAAGATGTCTGTGCCGACTTTGTGACTATGGCCGAGGCTT
TGCAAGAACAGGGTTATCAGTGTGGTCATATCGGGAAGTGGCATTTGGGGGATGATGAGGACGGTACAGGACCCTTGTCA
CAGGGATTTATATGGAATGTGGGCGGTAATAGAGCAGGAGCTCCCTATTCTTATTTTTATCCCTATTGTCTGCCTGATAA
AAGTAAATGTCATGTGGGATTAGAAGAAGGTATATTGGGTGAATATCTTACTGATCGGTTGACTGAAGAAGCTGTTTCTT
TTATAAAATCTCATAGTGAAGGTCCTTTTTTCTTACATTTGTCCCATCATGCCGTACATACGGTTTTGCAAGCACCTGAT
TCATTGATAAATAAATATCGTAATAAAACTCCCGGTAAATATCATAAGAATCCTATATATGCTGCAATGATTGAAAAACT
AGATGATAGTGTTGGTAGGATATGCCAAGTTATTAAGACATTAGGAATAGCAGATCGTACAATAGTCATTTTTTATTCAG
ATAATGGAGGTTCGGAACCAGTGACAGACAATTATCCGTTAAATGGAGGAAAGGGAATGCCTTATGAAGGTGGGAGCCGT
GTGCCGTTGATTATAAGGTGGACTGGTAAAATAGAAGGAGGCATCCGTTCATCTGTTCCAATAACAGGAGTTGATTTTTA
TCCAACTTTTGTTACTTTGGCACAGGGTAAGATTCCTGCTAACTTAGATGGAAAAGATATTTTTACGCTTATAAATAATA
ATGAGACGGAACGTGATCTTTTCTGGCATTTTCCGGCTTATTTGGAGTCTTATTTAAACGGGGGAAGAGATTTCCGTGCA
AAACCTTATTCCAGTATTCGTTCAGGTGATTGGAAATTGATATATCATTATGAAGATAAGTCTATGGAACTGTTTAATTT
GAAGAATGATCTGGGAGAATCACAAGATCTATCAGGTTCAAATCCTGTAAAACGAGGAGAACTTTATCAGAAACTGATGA
AGTGGATTCAAGAAACTCATGCTCCTATTCCTGTGAAATTGAATCCTTATTATCGAGAGTAG

Upstream 100 bases:

>100_bases
TGGTAATTTATAGTGTGATACGAATGAGGCTGTCTCAAATGCGGAATAACGTATGGAGACGGTCTTGTTTGGTTTTTAAA
CTTAGAAAAATCGAAATAAA

Downstream 100 bases:

>100_bases
GTGAATGATATTTTTTTCTTCTATAGCTTTGCAGCCTAGGATATTTTCTCTAAATTGCCGATGTTTATAGCAGGAGTAGT
AATTATTAAATTCAGTAAAA

Product: sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MRFQKIGLTTVVLCTVGIQQSFSIDIVTKEKPNIVFILADDLGWTDLGVMGSDYYETPNIDRLATEGILFDNAYAAAANS
APSRACMMTGMYTPRHGVYTVSPPDRGDRTKRKYIAIPNVEDVCADFVTMAEALQEQGYQCGHIGKWHLGDDEDGTGPLS
QGFIWNVGGNRAGAPYSYFYPYCLPDKSKCHVGLEEGILGEYLTDRLTEEAVSFIKSHSEGPFFLHLSHHAVHTVLQAPD
SLINKYRNKTPGKYHKNPIYAAMIEKLDDSVGRICQVIKTLGIADRTIVIFYSDNGGSEPVTDNYPLNGGKGMPYEGGSR
VPLIIRWTGKIEGGIRSSVPITGVDFYPTFVTLAQGKIPANLDGKDIFTLINNNETERDLFWHFPAYLESYLNGGRDFRA
KPYSSIRSGDWKLIYHYEDKSMELFNLKNDLGESQDLSGSNPVKRGELYQKLMKWIQETHAPIPVKLNPYYRE

Sequences:

>Translated_473_residues
MRFQKIGLTTVVLCTVGIQQSFSIDIVTKEKPNIVFILADDLGWTDLGVMGSDYYETPNIDRLATEGILFDNAYAAAANS
APSRACMMTGMYTPRHGVYTVSPPDRGDRTKRKYIAIPNVEDVCADFVTMAEALQEQGYQCGHIGKWHLGDDEDGTGPLS
QGFIWNVGGNRAGAPYSYFYPYCLPDKSKCHVGLEEGILGEYLTDRLTEEAVSFIKSHSEGPFFLHLSHHAVHTVLQAPD
SLINKYRNKTPGKYHKNPIYAAMIEKLDDSVGRICQVIKTLGIADRTIVIFYSDNGGSEPVTDNYPLNGGKGMPYEGGSR
VPLIIRWTGKIEGGIRSSVPITGVDFYPTFVTLAQGKIPANLDGKDIFTLINNNETERDLFWHFPAYLESYLNGGRDFRA
KPYSSIRSGDWKLIYHYEDKSMELFNLKNDLGESQDLSGSNPVKRGELYQKLMKWIQETHAPIPVKLNPYYRE
>Mature_473_residues
MRFQKIGLTTVVLCTVGIQQSFSIDIVTKEKPNIVFILADDLGWTDLGVMGSDYYETPNIDRLATEGILFDNAYAAAANS
APSRACMMTGMYTPRHGVYTVSPPDRGDRTKRKYIAIPNVEDVCADFVTMAEALQEQGYQCGHIGKWHLGDDEDGTGPLS
QGFIWNVGGNRAGAPYSYFYPYCLPDKSKCHVGLEEGILGEYLTDRLTEEAVSFIKSHSEGPFFLHLSHHAVHTVLQAPD
SLINKYRNKTPGKYHKNPIYAAMIEKLDDSVGRICQVIKTLGIADRTIVIFYSDNGGSEPVTDNYPLNGGKGMPYEGGSR
VPLIIRWTGKIEGGIRSSVPITGVDFYPTFVTLAQGKIPANLDGKDIFTLINNNETERDLFWHFPAYLESYLNGGRDFRA
KPYSSIRSGDWKLIYHYEDKSMELFNLKNDLGESQDLSGSNPVKRGELYQKLMKWIQETHAPIPVKLNPYYRE

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI4503899, Length=378, Percent_Identity=31.4814814814815, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI59797060, Length=485, Percent_Identity=31.7525773195876, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI38569405, Length=484, Percent_Identity=28.7190082644628, Blast_Score=153, Evalue=4e-37,
Organism=Homo sapiens, GI109389362, Length=492, Percent_Identity=28.8617886178862, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI38569407, Length=355, Percent_Identity=31.5492957746479, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI146229331, Length=393, Percent_Identity=31.2977099236641, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI146229329, Length=393, Percent_Identity=31.2977099236641, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI6005990, Length=393, Percent_Identity=31.2977099236641, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI146229324, Length=393, Percent_Identity=31.2977099236641, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI45430057, Length=500, Percent_Identity=26.6, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI53831991, Length=207, Percent_Identity=32.8502415458937, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI31742482, Length=174, Percent_Identity=35.0574712643678, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI146229327, Length=293, Percent_Identity=29.3515358361775, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI58743319, Length=143, Percent_Identity=38.4615384615385, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI157266309, Length=213, Percent_Identity=31.924882629108, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI71852586, Length=138, Percent_Identity=40.5797101449275, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI71852584, Length=138, Percent_Identity=40.5797101449275, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI39930577, Length=470, Percent_Identity=22.1276595744681, Blast_Score=81, Evalue=2e-15,
Organism=Escherichia coli, GI87081924, Length=517, Percent_Identity=26.3056092843327, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1790233, Length=387, Percent_Identity=27.6485788113695, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1790112, Length=493, Percent_Identity=24.7464503042596, Blast_Score=102, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI115533416, Length=473, Percent_Identity=27.906976744186, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI115533418, Length=465, Percent_Identity=27.3118279569892, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17559078, Length=253, Percent_Identity=29.2490118577075, Blast_Score=92, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24666109, Length=377, Percent_Identity=35.5437665782493, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI281366397, Length=437, Percent_Identity=31.350114416476, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI281366395, Length=437, Percent_Identity=31.350114416476, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24666163, Length=437, Percent_Identity=31.350114416476, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI281363223, Length=408, Percent_Identity=30.6372549019608, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24666175, Length=392, Percent_Identity=31.6326530612245, Blast_Score=138, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 52950; Mature: 52950

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFQKIGLTTVVLCTVGIQQSFSIDIVTKEKPNIVFILADDLGWTDLGVMGSDYYETPNI
CCCHHHCHHEEEEEHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
DRLATEGILFDNAYAAAANSAPSRACMMTGMYTPRHGVYTVSPPDRGDRTKRKYIAIPNV
HHHHHCCEEECCCHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCEEEECCCH
EDVCADFVTMAEALQEQGYQCGHIGKWHLGDDEDGTGPLSQGFIWNVGGNRAGAPYSYFY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEC
PYCLPDKSKCHVGLEEGILGEYLTDRLTEEAVSFIKSHSEGPFFLHLSHHAVHTVLQAPD
CEECCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCH
SLINKYRNKTPGKYHKNPIYAAMIEKLDDSVGRICQVIKTLGIADRTIVIFYSDNGGSEP
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
VTDNYPLNGGKGMPYEGGSRVPLIIRWTGKIEGGIRSSVPITGVDFYPTFVTLAQGKIPA
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCEEEEECCCCCC
NLDGKDIFTLINNNETERDLFWHFPAYLESYLNGGRDFRAKPYSSIRSGDWKLIYHYEDK
CCCCCEEEEEECCCCCCHHHEEECHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEECCC
SMELFNLKNDLGESQDLSGSNPVKRGELYQKLMKWIQETHAPIPVKLNPYYRE
CEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
>Mature Secondary Structure
MRFQKIGLTTVVLCTVGIQQSFSIDIVTKEKPNIVFILADDLGWTDLGVMGSDYYETPNI
CCCHHHCHHEEEEEHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
DRLATEGILFDNAYAAAANSAPSRACMMTGMYTPRHGVYTVSPPDRGDRTKRKYIAIPNV
HHHHHCCEEECCCHHHHCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCEEEECCCH
EDVCADFVTMAEALQEQGYQCGHIGKWHLGDDEDGTGPLSQGFIWNVGGNRAGAPYSYFY
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEC
PYCLPDKSKCHVGLEEGILGEYLTDRLTEEAVSFIKSHSEGPFFLHLSHHAVHTVLQAPD
CEECCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCH
SLINKYRNKTPGKYHKNPIYAAMIEKLDDSVGRICQVIKTLGIADRTIVIFYSDNGGSEP
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
VTDNYPLNGGKGMPYEGGSRVPLIIRWTGKIEGGIRSSVPITGVDFYPTFVTLAQGKIPA
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCCCCCEEEEECCCCCC
NLDGKDIFTLINNNETERDLFWHFPAYLESYLNGGRDFRAKPYSSIRSGDWKLIYHYEDK
CCCCCEEEEEECCCCCCHHHEEECHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEEECCC
SMELFNLKNDLGESQDLSGSNPVKRGELYQKLMKWIQETHAPIPVKLNPYYRE
CEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]