| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003688
Identifier: 150003688
GI number: 150003688
Start: 1489370
End: 1491409
Strand: Reverse
Name: 150003688
Synonym: BVU_1119
Alternate gene names: NA
Gene position: 1491409-1489370 (Counterclockwise)
Preceding gene: 150003689
Following gene: 150003687
Centisome position: 28.89
GC content: 38.43
Gene sequence:
>2040_bases ATGAAATTTAAAAATACTTTAATAATAGGATTAGCAACTTTGACTCTAATATCATGCAATGATTTCCTTGACGTGGATTC TCCATCAAGTTACAATGAGGACTTTGTGTTCAGCCAAGAAACAGAAATTAGCCGTGCGTTGAACGGTGTTTATGCTTCTA TCTTGGTAGGTGATCTTTATGGCAGTGCCTATCAGAAAACTTTTAATTTGAACAGTGATGTTGATATGCAGATGTATACA GGTAATGTAGCAACCCATAATAGCTATGCACGTTTTGATTGTGACGATCAAGGTGGCGAAATTGATAAATATTGGAGAGC TTCTTATAAAGCTATTGAAGATGCTAACCGTTTTATCCGGGGTGTAGAAACTGGTCCGCTTTATAATGAAGAGAATACCG CTGTTATGCAGATGTTGGGCGAAGCCAAGTGTCTTCGTGCTATGGTTTATCATGATCTGGTAGTGATGTTCGGGGATGTT CCTTTCACTTTCCTGCCAGCCTCACAATTAGGTGATAATTATGTGATTCCTGTAATGAATCGCGAAGAAATCCAAAATAA ACTTATTGAAGATTTGCAGGATATTGCTCCTAAGATGTCTTCTACTACAACAACAACAGTAGAACGTGCGTCTAAGGAGT TTGCTTGGGCATTAATTGCACGTATTGCATTGACTGCCGGAGGTTATTCACTTCATCCGGATAAAAATAATGCAAATAGT TATGGTGTGATGAAACGTCCGGAAGATTATCAGAAGTATTATCAAATCGTAAAAGAATATACTAGCCTGGTTATTGCTTC GGGGACACACTCTGTAGGCACTTCTTATCAAGATATTTTTACCAAGGAAAGCAATTTTGAAATTATTGCTAAAGGTGATC CTATTTTTGAGATTCCTTTTGCTAAGGAGTCTACAGGTAATACAGGGTATTCTCAAGGACCTACATCAACCGTTAATGAA GGAAAGACATTGGGTAAGAATGTATGGGGAGAATCTAAAGGTGATATACGTTTGAGTGCTTTTTACCGTTATTCATTCGA TGAGAATGATAAGCGTCGAGATTTTATTAATGGACTTTGGTATTATGGTAACAGTGCTAATAATGCTACTCAGGATTCTT GTATGATTCGTGCGGATTATACTGTCCATAATAATAAATGGTCTAAATTATGGGCGAATGCGGGACAGTTTACCAATTTG AGTGCCAGTAATACAGGTATTAACTTCCCTTATATGCGTTATACGGATGTTTTGTTGATGAATGCCGAAGCTGTTAATGA GTTGGAAGGACCTACTGCCACTGCTCAGGAGTCACTTCGTCAAGTCCATGCACGGGCATTCGATGACCAAAGTGTTGTTT CTGCCTATATTGCTCAGGTGGCTTCTTCTAAAGAAACTTTTTTGAAAGCCGTGCTTGATGAACGTAAATGGGAGTTTGCG GGTGAGAATATGCGCTGGAGAGATCTTGTCCGTAATAATCTTTATGGACAGGAAATTGTTTATAGTTTTTTGCGCTATCT TTCTGTAGGAATGTCTAATGCCGGTTCTTCTACTGGCTTCGAAGATGATATAGCTGAACATGATGGTAGTGCTTATTTGG ATGATCTTCCCGAATCTATGTATTACCATGTTCTTCCACAAACGGTTGAATGGCGTGTGGATGTAAATCAAGTTTATGGC TATCCTTATCCCAATAAGATATTGGATATGCTCTATATTTATAATCCTTACAAATCAGCTAATCAACCAGCGACAGCTTT GGTAGCTGTTGATGGAGCAACTTGGAAGATGGCGGAATTTTATCAGTGGAGCAATGATTCGGAGCCTACTAACCAATGTA AATATTCATTCTATGGATATATTCGTCATACAGAACAAGGAATGATTGTGTTGGTCAAAGATGGAACAGAATCACCACTG GATGGTAATTCTGTTCCTGAGGTGAATGATTTACCTCCTGTACGTTATATTTTACCTTATCCTAATGCGGCTATCCAACG CTCAGCAGGTGTATACAAGAACTATTATGGCTATAAATAA
Upstream 100 bases:
>100_bases TATTCAGACAGGATTAACTTGTGGTATGGACTATAACCGTTACCCACGTAGTCGCAGTTTTGTACTAGGTACTAATATTA CATTCTAAATTTGAAAGCAC
Downstream 100 bases:
>100_bases TTTATAAAAGGACAGAATGATGAAAAAAATATTTTTATATGCATTAATGTTATTTTCAGGTTTCTCATGTATTTCGTGTT CTGATGATGATGAGAAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: RagB/SusD Domain-Containing Protein; Outer Membrane Protein; Ragb/Susd Domain Protein; SusD/RagB Family Protein; Lipoprotein
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MKFKNTLIIGLATLTLISCNDFLDVDSPSSYNEDFVFSQETEISRALNGVYASILVGDLYGSAYQKTFNLNSDVDMQMYT GNVATHNSYARFDCDDQGGEIDKYWRASYKAIEDANRFIRGVETGPLYNEENTAVMQMLGEAKCLRAMVYHDLVVMFGDV PFTFLPASQLGDNYVIPVMNREEIQNKLIEDLQDIAPKMSSTTTTTVERASKEFAWALIARIALTAGGYSLHPDKNNANS YGVMKRPEDYQKYYQIVKEYTSLVIASGTHSVGTSYQDIFTKESNFEIIAKGDPIFEIPFAKESTGNTGYSQGPTSTVNE GKTLGKNVWGESKGDIRLSAFYRYSFDENDKRRDFINGLWYYGNSANNATQDSCMIRADYTVHNNKWSKLWANAGQFTNL SASNTGINFPYMRYTDVLLMNAEAVNELEGPTATAQESLRQVHARAFDDQSVVSAYIAQVASSKETFLKAVLDERKWEFA GENMRWRDLVRNNLYGQEIVYSFLRYLSVGMSNAGSSTGFEDDIAEHDGSAYLDDLPESMYYHVLPQTVEWRVDVNQVYG YPYPNKILDMLYIYNPYKSANQPATALVAVDGATWKMAEFYQWSNDSEPTNQCKYSFYGYIRHTEQGMIVLVKDGTESPL DGNSVPEVNDLPPVRYILPYPNAAIQRSAGVYKNYYGYK
Sequences:
>Translated_679_residues MKFKNTLIIGLATLTLISCNDFLDVDSPSSYNEDFVFSQETEISRALNGVYASILVGDLYGSAYQKTFNLNSDVDMQMYT GNVATHNSYARFDCDDQGGEIDKYWRASYKAIEDANRFIRGVETGPLYNEENTAVMQMLGEAKCLRAMVYHDLVVMFGDV PFTFLPASQLGDNYVIPVMNREEIQNKLIEDLQDIAPKMSSTTTTTVERASKEFAWALIARIALTAGGYSLHPDKNNANS YGVMKRPEDYQKYYQIVKEYTSLVIASGTHSVGTSYQDIFTKESNFEIIAKGDPIFEIPFAKESTGNTGYSQGPTSTVNE GKTLGKNVWGESKGDIRLSAFYRYSFDENDKRRDFINGLWYYGNSANNATQDSCMIRADYTVHNNKWSKLWANAGQFTNL SASNTGINFPYMRYTDVLLMNAEAVNELEGPTATAQESLRQVHARAFDDQSVVSAYIAQVASSKETFLKAVLDERKWEFA GENMRWRDLVRNNLYGQEIVYSFLRYLSVGMSNAGSSTGFEDDIAEHDGSAYLDDLPESMYYHVLPQTVEWRVDVNQVYG YPYPNKILDMLYIYNPYKSANQPATALVAVDGATWKMAEFYQWSNDSEPTNQCKYSFYGYIRHTEQGMIVLVKDGTESPL DGNSVPEVNDLPPVRYILPYPNAAIQRSAGVYKNYYGYK >Mature_679_residues MKFKNTLIIGLATLTLISCNDFLDVDSPSSYNEDFVFSQETEISRALNGVYASILVGDLYGSAYQKTFNLNSDVDMQMYT GNVATHNSYARFDCDDQGGEIDKYWRASYKAIEDANRFIRGVETGPLYNEENTAVMQMLGEAKCLRAMVYHDLVVMFGDV PFTFLPASQLGDNYVIPVMNREEIQNKLIEDLQDIAPKMSSTTTTTVERASKEFAWALIARIALTAGGYSLHPDKNNANS YGVMKRPEDYQKYYQIVKEYTSLVIASGTHSVGTSYQDIFTKESNFEIIAKGDPIFEIPFAKESTGNTGYSQGPTSTVNE GKTLGKNVWGESKGDIRLSAFYRYSFDENDKRRDFINGLWYYGNSANNATQDSCMIRADYTVHNNKWSKLWANAGQFTNL SASNTGINFPYMRYTDVLLMNAEAVNELEGPTATAQESLRQVHARAFDDQSVVSAYIAQVASSKETFLKAVLDERKWEFA GENMRWRDLVRNNLYGQEIVYSFLRYLSVGMSNAGSSTGFEDDIAEHDGSAYLDDLPESMYYHVLPQTVEWRVDVNQVYG YPYPNKILDMLYIYNPYKSANQPATALVAVDGATWKMAEFYQWSNDSEPTNQCKYSFYGYIRHTEQGMIVLVKDGTESPL DGNSVPEVNDLPPVRYILPYPNAAIQRSAGVYKNYYGYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76723; Mature: 76723
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKNTLIIGLATLTLISCNDFLDVDSPSSYNEDFVFSQETEISRALNGVYASILVGDLY CCCCCEEEEEEHHHHHEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH GSAYQKTFNLNSDVDMQMYTGNVATHNSYARFDCDDQGGEIDKYWRASYKAIEDANRFIR HHHHHHEECCCCCCCEEEEECCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH GVETGPLYNEENTAVMQMLGEAKCLRAMVYHDLVVMFGDVPFTFLPASQLGDNYVIPVMN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEECCC REEIQNKLIEDLQDIAPKMSSTTTTTVERASKEFAWALIARIALTAGGYSLHPDKNNANS HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC YGVMKRPEDYQKYYQIVKEYTSLVIASGTHSVGTSYQDIFTKESNFEIIAKGDPIFEIPF CCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHCCCCCCEEEECCCCEEEECC AKESTGNTGYSQGPTSTVNEGKTLGKNVWGESKGDIRLSAFYRYSFDENDKRRDFINGLW CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCEE YYGNSANNATQDSCMIRADYTVHNNKWSKLWANAGQFTNLSASNTGINFPYMRYTDVLLM EECCCCCCCCCCCEEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHEEEE NAEAVNELEGPTATAQESLRQVHARAFDDQSVVSAYIAQVASSKETFLKAVLDERKWEFA CHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC GENMRWRDLVRNNLYGQEIVYSFLRYLSVGMSNAGSSTGFEDDIAEHDGSAYLDDLPESM CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHCCHHH YYHVLPQTVEWRVDVNQVYGYPYPNKILDMLYIYNPYKSANQPATALVAVDGATWKMAEF EEHHCCCCEEEEEEHHHEECCCCHHHHHHHHHEECCCCCCCCCCEEEEEECCCCEEHHHH YQWSNDSEPTNQCKYSFYGYIRHTEQGMIVLVKDGTESPLDGNSVPEVNDLPPVRYILPY HHCCCCCCCHHHCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC PNAAIQRSAGVYKNYYGYK CCHHHHHCCCCHHHCCCCC >Mature Secondary Structure MKFKNTLIIGLATLTLISCNDFLDVDSPSSYNEDFVFSQETEISRALNGVYASILVGDLY CCCCCEEEEEEHHHHHEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH GSAYQKTFNLNSDVDMQMYTGNVATHNSYARFDCDDQGGEIDKYWRASYKAIEDANRFIR HHHHHHEECCCCCCCEEEEECCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH GVETGPLYNEENTAVMQMLGEAKCLRAMVYHDLVVMFGDVPFTFLPASQLGDNYVIPVMN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEECCC REEIQNKLIEDLQDIAPKMSSTTTTTVERASKEFAWALIARIALTAGGYSLHPDKNNANS HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC YGVMKRPEDYQKYYQIVKEYTSLVIASGTHSVGTSYQDIFTKESNFEIIAKGDPIFEIPF CCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHCCCCCCEEEECCCCEEEECC AKESTGNTGYSQGPTSTVNEGKTLGKNVWGESKGDIRLSAFYRYSFDENDKRRDFINGLW CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCEE YYGNSANNATQDSCMIRADYTVHNNKWSKLWANAGQFTNLSASNTGINFPYMRYTDVLLM EECCCCCCCCCCCEEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHEEEE NAEAVNELEGPTATAQESLRQVHARAFDDQSVVSAYIAQVASSKETFLKAVLDERKWEFA CHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC GENMRWRDLVRNNLYGQEIVYSFLRYLSVGMSNAGSSTGFEDDIAEHDGSAYLDDLPESM CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHCCHHH YYHVLPQTVEWRVDVNQVYGYPYPNKILDMLYIYNPYKSANQPATALVAVDGATWKMAEF EEHHCCCCEEEEEEHHHEECCCCHHHHHHHHHEECCCCCCCCCCEEEEEECCCCEEHHHH YQWSNDSEPTNQCKYSFYGYIRHTEQGMIVLVKDGTESPLDGNSVPEVNDLPPVRYILPY HHCCCCCCCHHHCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC PNAAIQRSAGVYKNYYGYK CCHHHHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA