| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is chbR [C]
Identifier: 150003669
GI number: 150003669
Start: 1464694
End: 1465191
Strand: Reverse
Name: chbR [C]
Synonym: BVU_1100
Alternate gene names: 150003669
Gene position: 1465191-1464694 (Counterclockwise)
Preceding gene: 150003674
Following gene: 150003668
Centisome position: 28.38
GC content: 51.41
Gene sequence:
>498_bases ATGGAATACCTGTTTCTGAGACGTAAAAAGACGAGCAGCACTTCTGTAAGACAGAAGACATTGCTCTATCGTGCCGCCGG CCGCGAATGGACGGCGCGGTTCTCGTCACTGTCGGATGTCCGTCCGGCAGACAGCCTTATATATAAAGGTATATTGTATC AGTTGGAGATACGCCGGGCGTTCCTCGATTCCTCTCTTTCGTTAAAGAAACTGAGTATGATGCTCGAAACAAACCAGACT TACCTGAGCAATGCGGTGAACCGCTACTTCGGTTGTCATCTGAAGGAGTTGCTTAACCGCTACCGGGTGGAATACGCTAA GGAGCTGCTTCGCAACGGCGGTTGTCCGCTGGGCGAGGTTCCGTCACGGAGCGGTTTCGGTTCGAAGAGTCCTTTCTATC TGGCTTTCGTCCGTCAGACGGGTATGACTCCGAAACGGTATGCGGCGCGCGAGAGGAACCTGGTGAACTTGGAAATAGAG AATGAAGTCCTTTTATAA
Upstream 100 bases:
>100_bases TATAGTTAATATTTTGATTTAAAGCCTGTTATCGTCTGTTTGTAGATCTCTTACTAAGAGATCTGCATAAAAGGCCAATA AGAACGAATAACGAGTTTAG
Downstream 100 bases:
>100_bases CAGTATATGTATAACCAATTTTTAGTTTTTTAAATTTATAAATTTAAATCTTTATTTATGAACAAAAAGTTTTTAAGTGC AGTTCTGTTCGGAGCCTTGA
Product: putative transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MEYLFLRRKKTSSTSVRQKTLLYRAAGREWTARFSSLSDVRPADSLIYKGILYQLEIRRAFLDSSLSLKKLSMMLETNQT YLSNAVNRYFGCHLKELLNRYRVEYAKELLRNGGCPLGEVPSRSGFGSKSPFYLAFVRQTGMTPKRYAARERNLVNLEIE NEVLL
Sequences:
>Translated_165_residues MEYLFLRRKKTSSTSVRQKTLLYRAAGREWTARFSSLSDVRPADSLIYKGILYQLEIRRAFLDSSLSLKKLSMMLETNQT YLSNAVNRYFGCHLKELLNRYRVEYAKELLRNGGCPLGEVPSRSGFGSKSPFYLAFVRQTGMTPKRYAARERNLVNLEIE NEVLL >Mature_165_residues MEYLFLRRKKTSSTSVRQKTLLYRAAGREWTARFSSLSDVRPADSLIYKGILYQLEIRRAFLDSSLSLKKLSMMLETNQT YLSNAVNRYFGCHLKELLNRYRVEYAKELLRNGGCPLGEVPSRSGFGSKSPFYLAFVRQTGMTPKRYAARERNLVNLEIE NEVLL
Specific function: Repressor For The Chbbcarfg Operon (Probable). [C]
COG id: COG4753
COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19134; Mature: 19134
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYLFLRRKKTSSTSVRQKTLLYRAAGREWTARFSSLSDVRPADSLIYKGILYQLEIRRA CCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FLDSSLSLKKLSMMLETNQTYLSNAVNRYFGCHLKELLNRYRVEYAKELLRNGGCPLGEV HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PSRSGFGSKSPFYLAFVRQTGMTPKRYAARERNLVNLEIENEVLL CCCCCCCCCCCEEEEEEHHCCCCHHHHHHHCCCEEEEEECCEECC >Mature Secondary Structure MEYLFLRRKKTSSTSVRQKTLLYRAAGREWTARFSSLSDVRPADSLIYKGILYQLEIRRA CCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH FLDSSLSLKKLSMMLETNQTYLSNAVNRYFGCHLKELLNRYRVEYAKELLRNGGCPLGEV HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PSRSGFGSKSPFYLAFVRQTGMTPKRYAARERNLVNLEIENEVLL CCCCCCCCCCCEEEEEEHHCCCCHHHHHHHCCCEEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA