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The map label for this gene is galS [H]

Identifier: 150003616

GI number: 150003616

Start: 1393800

End: 1395875

Strand: Direct

Name: galS [H]

Synonym: BVU_1047

Alternate gene names: 150003616

Gene position: 1393800-1395875 (Clockwise)

Preceding gene: 150003615

Following gene: 150003617

Centisome position: 26.99

GC content: 45.04

Gene sequence:

>2076_bases
ATGAGAGAATATAAAGCAATATTCATTTGTATCCTGATTTGCAATGTATTTGTTTGTCCGAAATCCTTCGGGCAAACAGA
TTACACATATGAAAAAGGAAAGTCATTCAAGAACACAAACGCTTTGTCAATGACAGATACGATTGATTTAACTTCCATTT
CTTCTCCCATACCCTATAAGAAATCCATACCCGGACAAACCCAGACTATTGCCTGTCCGGTACGGTTACCCGGGTACGTC
CGAGGTATTTTCTTCAGCCGAGACTCCCGTCCGGGAGATTTTGAATGGCCCAACAATACCAACCGGCTCCTACCTTGGGT
GTTCAACGATTTAAAAGAATTAACCGACACCCGCTATCCGGGAATACCTTCCAATGCAGCCCCATCTACGTTGGGAGATG
CATTACTGCTGGAACTGACAAACGGAGAATACTTGTTTGCCAAAGCTGTTGCCGGCCGTAACAGTTTAAGCTGGCTGCAA
GTAAACGATAACGGCTCTGTCACCCTATATGTATCCACCTTAGGAAAAGACTATCTGAAACCGGAAGTCCCTCTTCTACT
CATCCGACAAGGAAAAGATATTTATTCAACCATTCGGCAAGCCTATCAAGCGCTGATGAAAAATACGGAAACCGCCGACT
TAAAAAGCCGTACAGCCAAGGAATATTTCGAAGCTTTCCGCTATCTCGGTTGGTGTACATGGGAACATTATCATGATGAT
ATAAACGAATCCAAGGTAATAAACGATATGAAAACGATAGAGGCATCTGGCATTCCTATCCGGTATGTACTGATTGACGA
CGGTCATCTCGCCCACAAGAACAGGCAACTGACCGGTTTCATACCGGATAAACAACGTTTCCCGTCGGGATGGAAAAAAA
TCATGTCATACAAAAAAGAAAATAAAATCAAATGGATCGGACTGTGGTACAGCCTTTCGGGATACTGGATGGGATTATCC
CCCGAAAACGGATTTCCACAAGTCATCCGACAAGCCCTATACCCACACGCCGGCAGCCTTCTGCCAGGAACGGACAGCAC
CCGCATCCGTTCCTTCTATCGCTACTACGTCAGCACCTTAAAAGAACAAGGATTCGATTTTCTGAAAGTAGATAACCAAG
CTTTTACGCTGCCACTCTACATGGGAGGGCATGAAAGTATCCGCCAGGCAACCGACTGTAACCGAAGCCTGGAAGCCGAG
ATCCACCGGCAAAATATGGGATTAATGAACTGTATGGCACAGAACATCATCAATACCGACCATACGTCATACAGCAACAG
CACCCGTGTCAGCATAGACTATAAGAAATATGATGAGGATATGGCAAAATCACATCTATTCCAGTCTTATACCAATACCC
TGCTACTAGGACAAACCGTATGGCCCGACCATGATATGTTTCATTCCTGCGATACCGTTTGCGGCACTTTGATGGCACGT
TCCAAGGCCATTTCCGGAGGTCCGGTCTACCTGTCGGACGCCCCCGGGGACTTTATCAAGGAAAACATCTTTCCTTTAAT
TGACAAACAAGGCAAACTGTTCCGCCCCGAAGCTCCTGCCGTACCTATGCCTGAATCTATACTGACCAATCCATTATGGA
GTGGAAAAGCATATCGAGTAGCAGCTCCCTCAGGCAACGGAGCAATGACATTAATCTGTTACAACCTGAATGTTTCCCCC
CGACATCAGCAAGTCCAGGCCACTATAAAAAAAGAAGATTATTCTCTTCGGAACAGTTTTGAGAAAATGTCTGCCACCCC
CGAAGAACGCGTGCTGCTTTATAATTGGGAATCACAAAAGGCAGAAGAACTATCAGACAGCAGTACATTCGAACTTATCG
GATTTACAGACAAACTGTTTCATCTCTGCCCCATACGGAAAGGATGGGCAGTCATTGGCATACAGGAAAAGTATCTGTCC
CCGGCCACCGTCCAAACTATCTCTTTAACAGAGAACCGCTTGGTGCTGAACGTACTATGTACAGGTACACTAAAAGTATG
GATAGAAAATTCCGGCAAGCAAGAACTGAGAAGTATTTCCATAGATACCCCCCAAAAAATTGTAATCGAAAAATAA

Upstream 100 bases:

>100_bases
GGTAGAAACCACCGCCTTGCGCCTCACCGTAACCCAATCCGTTGCCGTACCCGAAATCAGACATTTCAGTGCCTATAACG
TAACCCTCAAATAAAAAATC

Downstream 100 bases:

>100_bases
CTTATAAAACTAGCCGATATGAATAAAAAACTACTTGTATCTTTCGCTCTCGCTTCCTTAACAGGAATCTCGACGCAAGC
AAAAGAAAAAATGTCTTCAG

Product: alpha-glycosidase

Products: NA

Alternate protein names: Alpha-Gal [H]

Number of amino acids: Translated: 691; Mature: 691

Protein sequence:

>691_residues
MREYKAIFICILICNVFVCPKSFGQTDYTYEKGKSFKNTNALSMTDTIDLTSISSPIPYKKSIPGQTQTIACPVRLPGYV
RGIFFSRDSRPGDFEWPNNTNRLLPWVFNDLKELTDTRYPGIPSNAAPSTLGDALLLELTNGEYLFAKAVAGRNSLSWLQ
VNDNGSVTLYVSTLGKDYLKPEVPLLLIRQGKDIYSTIRQAYQALMKNTETADLKSRTAKEYFEAFRYLGWCTWEHYHDD
INESKVINDMKTIEASGIPIRYVLIDDGHLAHKNRQLTGFIPDKQRFPSGWKKIMSYKKENKIKWIGLWYSLSGYWMGLS
PENGFPQVIRQALYPHAGSLLPGTDSTRIRSFYRYYVSTLKEQGFDFLKVDNQAFTLPLYMGGHESIRQATDCNRSLEAE
IHRQNMGLMNCMAQNIINTDHTSYSNSTRVSIDYKKYDEDMAKSHLFQSYTNTLLLGQTVWPDHDMFHSCDTVCGTLMAR
SKAISGGPVYLSDAPGDFIKENIFPLIDKQGKLFRPEAPAVPMPESILTNPLWSGKAYRVAAPSGNGAMTLICYNLNVSP
RHQQVQATIKKEDYSLRNSFEKMSATPEERVLLYNWESQKAEELSDSSTFELIGFTDKLFHLCPIRKGWAVIGIQEKYLS
PATVQTISLTENRLVLNVLCTGTLKVWIENSGKQELRSISIDTPQKIVIEK

Sequences:

>Translated_691_residues
MREYKAIFICILICNVFVCPKSFGQTDYTYEKGKSFKNTNALSMTDTIDLTSISSPIPYKKSIPGQTQTIACPVRLPGYV
RGIFFSRDSRPGDFEWPNNTNRLLPWVFNDLKELTDTRYPGIPSNAAPSTLGDALLLELTNGEYLFAKAVAGRNSLSWLQ
VNDNGSVTLYVSTLGKDYLKPEVPLLLIRQGKDIYSTIRQAYQALMKNTETADLKSRTAKEYFEAFRYLGWCTWEHYHDD
INESKVINDMKTIEASGIPIRYVLIDDGHLAHKNRQLTGFIPDKQRFPSGWKKIMSYKKENKIKWIGLWYSLSGYWMGLS
PENGFPQVIRQALYPHAGSLLPGTDSTRIRSFYRYYVSTLKEQGFDFLKVDNQAFTLPLYMGGHESIRQATDCNRSLEAE
IHRQNMGLMNCMAQNIINTDHTSYSNSTRVSIDYKKYDEDMAKSHLFQSYTNTLLLGQTVWPDHDMFHSCDTVCGTLMAR
SKAISGGPVYLSDAPGDFIKENIFPLIDKQGKLFRPEAPAVPMPESILTNPLWSGKAYRVAAPSGNGAMTLICYNLNVSP
RHQQVQATIKKEDYSLRNSFEKMSATPEERVLLYNWESQKAEELSDSSTFELIGFTDKLFHLCPIRKGWAVIGIQEKYLS
PATVQTISLTENRLVLNVLCTGTLKVWIENSGKQELRSISIDTPQKIVIEK
>Mature_691_residues
MREYKAIFICILICNVFVCPKSFGQTDYTYEKGKSFKNTNALSMTDTIDLTSISSPIPYKKSIPGQTQTIACPVRLPGYV
RGIFFSRDSRPGDFEWPNNTNRLLPWVFNDLKELTDTRYPGIPSNAAPSTLGDALLLELTNGEYLFAKAVAGRNSLSWLQ
VNDNGSVTLYVSTLGKDYLKPEVPLLLIRQGKDIYSTIRQAYQALMKNTETADLKSRTAKEYFEAFRYLGWCTWEHYHDD
INESKVINDMKTIEASGIPIRYVLIDDGHLAHKNRQLTGFIPDKQRFPSGWKKIMSYKKENKIKWIGLWYSLSGYWMGLS
PENGFPQVIRQALYPHAGSLLPGTDSTRIRSFYRYYVSTLKEQGFDFLKVDNQAFTLPLYMGGHESIRQATDCNRSLEAE
IHRQNMGLMNCMAQNIINTDHTSYSNSTRVSIDYKKYDEDMAKSHLFQSYTNTLLLGQTVWPDHDMFHSCDTVCGTLMAR
SKAISGGPVYLSDAPGDFIKENIFPLIDKQGKLFRPEAPAVPMPESILTNPLWSGKAYRVAAPSGNGAMTLICYNLNVSP
RHQQVQATIKKEDYSLRNSFEKMSATPEERVLLYNWESQKAEELSDSSTFELIGFTDKLFHLCPIRKGWAVIGIQEKYLS
PATVQTISLTENRLVLNVLCTGTLKVWIENSGKQELRSISIDTPQKIVIEK

Specific function: Involved in the degradation of various alpha-linked galactosides such as raffinose, stachyose and melibiose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 36 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017853
- InterPro:   IPR008811 [H]

Pfam domain/function: PF05691 Raffinose_syn [H]

EC number: =3.2.1.22 [H]

Molecular weight: Translated: 78478; Mature: 78478

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREYKAIFICILICNVFVCPKSFGQTDYTYEKGKSFKNTNALSMTDTIDLTSISSPIPYK
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCEEEECCEEECCCCCCCCCC
KSIPGQTQTIACPVRLPGYVRGIFFSRDSRPGDFEWPNNTNRLLPWVFNDLKELTDTRYP
CCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
GIPSNAAPSTLGDALLLELTNGEYLFAKAVAGRNSLSWLQVNDNGSVTLYVSTLGKDYLK
CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCHHCC
PEVPLLLIRQGKDIYSTIRQAYQALMKNTETADLKSRTAKEYFEAFRYLGWCTWEHYHDD
CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHCC
INESKVINDMKTIEASGIPIRYVLIDDGHLAHKNRQLTGFIPDKQRFPSGWKKIMSYKKE
CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHC
NKIKWIGLWYSLSGYWMGLSPENGFPQVIRQALYPHAGSLLPGTDSTRIRSFYRYYVSTL
CCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
KEQGFDFLKVDNQAFTLPLYMGGHESIRQATDCNRSLEAEIHRQNMGLMNCMAQNIINTD
HHCCCCEEEECCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCC
HTSYSNSTRVSIDYKKYDEDMAKSHLFQSYTNTLLLGQTVWPDHDMFHSCDTVCGTLMAR
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHH
SKAISGGPVYLSDAPGDFIKENIFPLIDKQGKLFRPEAPAVPMPESILTNPLWSGKAYRV
HCCCCCCCEEECCCCCHHHHHCCCHHCCCCCCEECCCCCCCCCCHHHHCCCCCCCCEEEE
AAPSGNGAMTLICYNLNVSPRHQQVQATIKKEDYSLRNSFEKMSATPEERVLLYNWESQK
ECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCCCH
AEELSDSSTFELIGFTDKLFHLCPIRKGWAVIGIQEKYLSPATVQTISLTENRLVLNVLC
HHHCCCCCCEEEEECHHHHHHHCCCCCCCEEEEEHHHHCCCCEEEEEEECCCEEEEEEEE
TGTLKVWIENSGKQELRSISIDTPQKIVIEK
CCEEEEEEECCCHHHHHEECCCCCCEEEEEC
>Mature Secondary Structure
MREYKAIFICILICNVFVCPKSFGQTDYTYEKGKSFKNTNALSMTDTIDLTSISSPIPYK
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCEEEECCEEECCCCCCCCCC
KSIPGQTQTIACPVRLPGYVRGIFFSRDSRPGDFEWPNNTNRLLPWVFNDLKELTDTRYP
CCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
GIPSNAAPSTLGDALLLELTNGEYLFAKAVAGRNSLSWLQVNDNGSVTLYVSTLGKDYLK
CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCHHCC
PEVPLLLIRQGKDIYSTIRQAYQALMKNTETADLKSRTAKEYFEAFRYLGWCTWEHYHDD
CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHCC
INESKVINDMKTIEASGIPIRYVLIDDGHLAHKNRQLTGFIPDKQRFPSGWKKIMSYKKE
CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHC
NKIKWIGLWYSLSGYWMGLSPENGFPQVIRQALYPHAGSLLPGTDSTRIRSFYRYYVSTL
CCEEEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
KEQGFDFLKVDNQAFTLPLYMGGHESIRQATDCNRSLEAEIHRQNMGLMNCMAQNIINTD
HHCCCCEEEECCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCCCC
HTSYSNSTRVSIDYKKYDEDMAKSHLFQSYTNTLLLGQTVWPDHDMFHSCDTVCGTLMAR
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHH
SKAISGGPVYLSDAPGDFIKENIFPLIDKQGKLFRPEAPAVPMPESILTNPLWSGKAYRV
HCCCCCCCEEECCCCCHHHHHCCCHHCCCCCCEECCCCCCCCCCHHHHCCCCCCCCEEEE
AAPSGNGAMTLICYNLNVSPRHQQVQATIKKEDYSLRNSFEKMSATPEERVLLYNWESQK
ECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEECCCCH
AEELSDSSTFELIGFTDKLFHLCPIRKGWAVIGIQEKYLSPATVQTISLTENRLVLNVLC
HHHCCCCCCEEEEECHHHHHHHCCCCCCCEEEEEHHHHCCCCEEEEEEECCCEEEEEEEE
TGTLKVWIENSGKQELRSISIDTPQKIVIEK
CCEEEEEEECCCHHHHHEECCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]