| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003610
Identifier: 150003610
GI number: 150003610
Start: 1378571
End: 1380109
Strand: Reverse
Name: 150003610
Synonym: BVU_1039
Alternate gene names: NA
Gene position: 1380109-1378571 (Counterclockwise)
Preceding gene: 150003618
Following gene: 150003609
Centisome position: 26.73
GC content: 41.72
Gene sequence:
>1539_bases TTGCAAGATATAACGAATCGTATACTAAGACAAATGAATTCTACCAGATTAATTAGTACGCTATTCAAGCCCAGACAAAA AGCGACAGCCTTGTATGCAACTCAGGCTGAGGCGCTCCAACATAAAGTGTTTTGCCGGCTGATGAAGGATGCGGCCCATA CGGAGTGGGGATTGAAATATGGCTATAAAGACATAAAGAGATATCAAGACTTTCAACGTGTACCTATACAGACTTACGAA GAAATCAAGCCATACGTGGAACGGATGCGTCATGGAGAGAAAGATGTCCTGTGGCGTGGAGAAGTGCAGTGGTTTGCCAA ATCTTCAGGAACAACTAATGACAAAAGTAAGTTTATTCCTGTCAGCAGGGAGGGACTTCATGATATTCATTATGCGGGTG GTATGGATGCAGTGGCGCTGTATCTCCAACAAAATCCTGAGAGTCGTTTTTTCTCTGGAAAAGGTCTGATTCTTGGAGGA AGCCATGCACCAAACTATAATGTGAAACGAAGTCTTGTAGGAGACCTTTCTGCCATATTGATTGAAAATGTGAATCCGTT GGTCAATCTGATTCGGGTGCCCGATAAAAAGATTGCGTTGCTGAGTGATTTCGAGGAAAAAGTAGAAAGGATTACTCGTG CCACAATGAATCAGAATGTGACCAATCTTTCAGGAGTGCCGTCATGGATGATGGCTGTACTGAAACATATTCTGGAAGTG AAGGGAACGGATAATTTGGCGGAAGTATGGCCTGATTTGGAAGTTTTTTTTCATGGAGGGGTTGCTTTTACTCCTTATCG CGAACAATATAAACAGCTTATTCGTAGCGACAAGATGCATTATATGGAAACATACAATGCCAGTGAAGGTTTTTTCGGAT TACAAAATGATTTCAGTGATCCTTCCATGTTACTGATGATTGACTATGGGGTATTTTATGAATTTATTCCGATGGAAGAT GTCGGTACTGAAAATCCTCATATTGTTCCGTTAACAGATGTGGAGTTGAATAAAAATTATGCGATGGTCATCAGTACTTC CTGCGGATTGTGGCGTTATATGATTGGTGATACCGTGAAGTTCACCAACAAACACCCCTATAAATTTGTTATAACAGGGC GTACCAAGCACTTTATTAATGCATTTGGTGAGGAGTTGATGGTGGATAATGCGGAACAAGGGTTGGCAAAAGCCTGCGAG GCGACCGGTGCACAGATTATTGATTATTCTGCTGCTCCTGTTTTCATGGATGCACATGCCAAGTGCCGTCATCAGTGGCT GATAGAATTTGCCGTTATGCCGGATTCTTTAGAGAATTTTAGTCGGGTTCTTGACACTTCTTTACAACAAATTAACTCCG ATTACGAAGCTAAACGCCATAAAAATATTACCTTGCAGCCGTTGGAAATAATCGTGGCGAGACCTAATCTGTTCCACGAT TGGCTGAAAGAAAAAGGCAAATTAGGCGGACAGCACAAAGTGCCGAGATTGAGCAATACGCGTGATTATATAGAAGAAAT GCTAAGCTTGAACCAATAA
Upstream 100 bases:
>100_bases AGTTGTAAGCGACCGTAAAGATAACAAAAAATAAAAGTAATGTAGAAAACTATAAAAAAAATAATGTTATCAGCCATTAT AATATAGAAATAAGCTATTT
Downstream 100 bases:
>100_bases GAACATGAATTGGAAAAAACATAAATTACCTGCTTTGTTGATGCTGATGATCGTGGTGTATTCCTGCGCAAGCATGGGAA CACCGGATGGAGGTCCGTAT
Product: putative auxin-regulated protein
Products: NA
Alternate protein names: Auxin-Regulated Protein; GH3 Auxin-Responsive Promoter Family Protein; Gh3 Auxin-Responsive Promoter; Plant Auxin-Regulated Protein; Plant Auxin-Responsive GH3-Like Protein; Gh3 AuxiN-Responsive Promoter; GH3 Auxin-Responsive Promoter Superfamily Protein; Auxin-Regulated Like; GH3 Family Protein
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MQDITNRILRQMNSTRLISTLFKPRQKATALYATQAEALQHKVFCRLMKDAAHTEWGLKYGYKDIKRYQDFQRVPIQTYE EIKPYVERMRHGEKDVLWRGEVQWFAKSSGTTNDKSKFIPVSREGLHDIHYAGGMDAVALYLQQNPESRFFSGKGLILGG SHAPNYNVKRSLVGDLSAILIENVNPLVNLIRVPDKKIALLSDFEEKVERITRATMNQNVTNLSGVPSWMMAVLKHILEV KGTDNLAEVWPDLEVFFHGGVAFTPYREQYKQLIRSDKMHYMETYNASEGFFGLQNDFSDPSMLLMIDYGVFYEFIPMED VGTENPHIVPLTDVELNKNYAMVISTSCGLWRYMIGDTVKFTNKHPYKFVITGRTKHFINAFGEELMVDNAEQGLAKACE ATGAQIIDYSAAPVFMDAHAKCRHQWLIEFAVMPDSLENFSRVLDTSLQQINSDYEAKRHKNITLQPLEIIVARPNLFHD WLKEKGKLGGQHKVPRLSNTRDYIEEMLSLNQ
Sequences:
>Translated_512_residues MQDITNRILRQMNSTRLISTLFKPRQKATALYATQAEALQHKVFCRLMKDAAHTEWGLKYGYKDIKRYQDFQRVPIQTYE EIKPYVERMRHGEKDVLWRGEVQWFAKSSGTTNDKSKFIPVSREGLHDIHYAGGMDAVALYLQQNPESRFFSGKGLILGG SHAPNYNVKRSLVGDLSAILIENVNPLVNLIRVPDKKIALLSDFEEKVERITRATMNQNVTNLSGVPSWMMAVLKHILEV KGTDNLAEVWPDLEVFFHGGVAFTPYREQYKQLIRSDKMHYMETYNASEGFFGLQNDFSDPSMLLMIDYGVFYEFIPMED VGTENPHIVPLTDVELNKNYAMVISTSCGLWRYMIGDTVKFTNKHPYKFVITGRTKHFINAFGEELMVDNAEQGLAKACE ATGAQIIDYSAAPVFMDAHAKCRHQWLIEFAVMPDSLENFSRVLDTSLQQINSDYEAKRHKNITLQPLEIIVARPNLFHD WLKEKGKLGGQHKVPRLSNTRDYIEEMLSLNQ >Mature_512_residues MQDITNRILRQMNSTRLISTLFKPRQKATALYATQAEALQHKVFCRLMKDAAHTEWGLKYGYKDIKRYQDFQRVPIQTYE EIKPYVERMRHGEKDVLWRGEVQWFAKSSGTTNDKSKFIPVSREGLHDIHYAGGMDAVALYLQQNPESRFFSGKGLILGG SHAPNYNVKRSLVGDLSAILIENVNPLVNLIRVPDKKIALLSDFEEKVERITRATMNQNVTNLSGVPSWMMAVLKHILEV KGTDNLAEVWPDLEVFFHGGVAFTPYREQYKQLIRSDKMHYMETYNASEGFFGLQNDFSDPSMLLMIDYGVFYEFIPMED VGTENPHIVPLTDVELNKNYAMVISTSCGLWRYMIGDTVKFTNKHPYKFVITGRTKHFINAFGEELMVDNAEQGLAKACE ATGAQIIDYSAAPVFMDAHAKCRHQWLIEFAVMPDSLENFSRVLDTSLQQINSDYEAKRHKNITLQPLEIIVARPNLFHD WLKEKGKLGGQHKVPRLSNTRDYIEEMLSLNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58824; Mature: 58824
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDITNRILRQMNSTRLISTLFKPRQKATALYATQAEALQHKVFCRLMKDAAHTEWGLKY CCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC GYKDIKRYQDFQRVPIQTYEEIKPYVERMRHGEKDVLWRGEVQWFAKSSGTTNDKSKFIP CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCCCCCC VSREGLHDIHYAGGMDAVALYLQQNPESRFFSGKGLILGGSHAPNYNVKRSLVGDLSAIL CCCCCCCHHHHCCCHHHEEHEECCCCCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHH IENVNPLVNLIRVPDKKIALLSDFEEKVERITRATMNQNVTNLSGVPSWMMAVLKHILEV HHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC KGTDNLAEVWPDLEVFFHGGVAFTPYREQYKQLIRSDKMHYMETYNASEGFFGLQNDFSD CCCCCHHHHCCCCEEEEECCEEECCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC PSMLLMIDYGVFYEFIPMEDVGTENPHIVPLTDVELNKNYAMVISTSCGLWRYMIGDTVK CCEEEEEECCHHHEECCCHHCCCCCCEEEEEECEEECCCEEEEEECCCCHHHHHHCCEEE FTNKHPYKFVITGRTKHFINAFGEELMVDNAEQGLAKACEATGAQIIDYSAAPVFMDAHA ECCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCEEECCHH KCRHQWLIEFAVMPDSLENFSRVLDTSLQQINSDYEAKRHKNITLQPLEIIVARPNLFHD HHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEECCHHHHH WLKEKGKLGGQHKVPRLSNTRDYIEEMLSLNQ HHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MQDITNRILRQMNSTRLISTLFKPRQKATALYATQAEALQHKVFCRLMKDAAHTEWGLKY CCHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC GYKDIKRYQDFQRVPIQTYEEIKPYVERMRHGEKDVLWRGEVQWFAKSSGTTNDKSKFIP CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCCCCCC VSREGLHDIHYAGGMDAVALYLQQNPESRFFSGKGLILGGSHAPNYNVKRSLVGDLSAIL CCCCCCCHHHHCCCHHHEEHEECCCCCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHH IENVNPLVNLIRVPDKKIALLSDFEEKVERITRATMNQNVTNLSGVPSWMMAVLKHILEV HHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC KGTDNLAEVWPDLEVFFHGGVAFTPYREQYKQLIRSDKMHYMETYNASEGFFGLQNDFSD CCCCCHHHHCCCCEEEEECCEEECCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC PSMLLMIDYGVFYEFIPMEDVGTENPHIVPLTDVELNKNYAMVISTSCGLWRYMIGDTVK CCEEEEEECCHHHEECCCHHCCCCCCEEEEEECEEECCCEEEEEECCCCHHHHHHCCEEE FTNKHPYKFVITGRTKHFINAFGEELMVDNAEQGLAKACEATGAQIIDYSAAPVFMDAHA ECCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCEEECCHH KCRHQWLIEFAVMPDSLENFSRVLDTSLQQINSDYEAKRHKNITLQPLEIIVARPNLFHD HHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEECCHHHHH WLKEKGKLGGQHKVPRLSNTRDYIEEMLSLNQ HHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA