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The map label for this gene is 150003566

Identifier: 150003566

GI number: 150003566

Start: 1315438

End: 1316115

Strand: Reverse

Name: 150003566

Synonym: BVU_0995

Alternate gene names: NA

Gene position: 1316115-1315438 (Counterclockwise)

Preceding gene: 150003572

Following gene: 150003565

Centisome position: 25.49

GC content: 41.89

Gene sequence:

>678_bases
ATGAACAGTATACCTACAGTAACCAAGAATTTATTGATAATAAATGTGTTGTGTTTCTTTGGCGGCGTGGTAGCCATGAA
GTATGGAATTGACTTGAACGACCTGCTGGGACTGCACTTTTTTATGGCATCTGATTTTAATCCTGCCCAGTTGATTACTT
ATATGTTTATGCATGGCGGTTTCCAGCATATCTTTTTTAACATGTTTGCTTTGTGGATGTTTGGCCGTACGCTTGAACAG
GTCTGGGGACCGAAACGTTTCTTATCCTATTATATGGTATGTGGTATAGGTGCGGGACTGGTGCAGGAGCTGGTGCAATA
TATACAATATGTGACTGAATTATCGCAGTATGACAGTGTGAATACGGGGATTGCCGTGATCCCGATGGCGGAGTACTTGA
ATCTGATGACTACAGTTGGCGCTTCGGGAGCGATATATGGCATTTTGTTGGCATTCGGTATGCTGTTCCCCAATAGTCAG
ATGTTTGTATTCCCTATCCCATTTCCTGTCAAGGCTAAATATTTTGTGATGGGATATGCTGCTTTGGAGATATTTTTGGG
CTTGGGTGCTTCGACCGATGGCGTTGCCCACTTTGCACACTTGGGAGGTATGATTTTTGGCTTTATATTGATAATGTATT
GGAGAAAAAAGAATAACAATGGGCAGTTTTATTACTGA

Upstream 100 bases:

>100_bases
AAAATCAAAAAAACGTAAGAGAACTCTTGTTTTCTGTTATATAACAGAATAAAATTGTAAATTTGCGCGCAATCAATGTT
TTATAAGACGAAGAATATTT

Downstream 100 bases:

>100_bases
TTTGAAAAATAGTTTCAACAAAGGGAACATATATATCCAGTTTATATATATTAATGTAGGGGTATTCATTGTAACTTCCT
TATTGGGAATTTTATGGATG

Product: putative transmembrane rhomboid family protein

Products: NA

Alternate protein names: Peptidase; Transmembrane Rhomboid Family Protein; Integral Membrane Protein; Rhomboid-Like Protein; Rhomboid Protein; Membrane Serine Protease; S54 Family Peptidase; Subfamily; Rhomboid Serine Protease; Rhomboid Family Membrane Protein; Intramembrane Protease; Serine Protease; Regulatory Proteins IclR; Cytoplasmic Membrane Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MNSIPTVTKNLLIINVLCFFGGVVAMKYGIDLNDLLGLHFFMASDFNPAQLITYMFMHGGFQHIFFNMFALWMFGRTLEQ
VWGPKRFLSYYMVCGIGAGLVQELVQYIQYVTELSQYDSVNTGIAVIPMAEYLNLMTTVGASGAIYGILLAFGMLFPNSQ
MFVFPIPFPVKAKYFVMGYAALEIFLGLGASTDGVAHFAHLGGMIFGFILIMYWRKKNNNGQFYY

Sequences:

>Translated_225_residues
MNSIPTVTKNLLIINVLCFFGGVVAMKYGIDLNDLLGLHFFMASDFNPAQLITYMFMHGGFQHIFFNMFALWMFGRTLEQ
VWGPKRFLSYYMVCGIGAGLVQELVQYIQYVTELSQYDSVNTGIAVIPMAEYLNLMTTVGASGAIYGILLAFGMLFPNSQ
MFVFPIPFPVKAKYFVMGYAALEIFLGLGASTDGVAHFAHLGGMIFGFILIMYWRKKNNNGQFYY
>Mature_225_residues
MNSIPTVTKNLLIINVLCFFGGVVAMKYGIDLNDLLGLHFFMASDFNPAQLITYMFMHGGFQHIFFNMFALWMFGRTLEQ
VWGPKRFLSYYMVCGIGAGLVQELVQYIQYVTELSQYDSVNTGIAVIPMAEYLNLMTTVGASGAIYGILLAFGMLFPNSQ
MFVFPIPFPVKAKYFVMGYAALEIFLGLGASTDGVAHFAHLGGMIFGFILIMYWRKKNNNGQFYY

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25331; Mature: 25331

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIPTVTKNLLIINVLCFFGGVVAMKYGIDLNDLLGLHFFMASDFNPAQLITYMFMHGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
FQHIFFNMFALWMFGRTLEQVWGPKRFLSYYMVCGIGAGLVQELVQYIQYVTELSQYDSV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
NTGIAVIPMAEYLNLMTTVGASGAIYGILLAFGMLFPNSQMFVFPIPFPVKAKYFVMGYA
CCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH
ALEIFLGLGASTDGVAHFAHLGGMIFGFILIMYWRKKNNNGQFYY
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNSIPTVTKNLLIINVLCFFGGVVAMKYGIDLNDLLGLHFFMASDFNPAQLITYMFMHGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
FQHIFFNMFALWMFGRTLEQVWGPKRFLSYYMVCGIGAGLVQELVQYIQYVTELSQYDSV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
NTGIAVIPMAEYLNLMTTVGASGAIYGILLAFGMLFPNSQMFVFPIPFPVKAKYFVMGYA
CCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH
ALEIFLGLGASTDGVAHFAHLGGMIFGFILIMYWRKKNNNGQFYY
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA