| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is dcp [H]
Identifier: 150003563
GI number: 150003563
Start: 1311367
End: 1313454
Strand: Reverse
Name: dcp [H]
Synonym: BVU_0992
Alternate gene names: 150003563
Gene position: 1313454-1311367 (Counterclockwise)
Preceding gene: 150003564
Following gene: 150003562
Centisome position: 25.44
GC content: 42.53
Gene sequence:
>2088_bases ATGAAAAGACTATTATTTACGTTAGCGACGTGTTGTGTAATGTGTGCATGTGAACAGAAAACAGAAATGAATCCGTTCTT TACGGAATTCCAGACCGAGTACGGTGCTCCCGATTTTACTAAGATCAGACTGGAGCATTATGAACCTGCTTTCTTGAAAG GAATAGAGGAGCAGAATGCGGAAATTAAGGCAATAGTTGATAATCCCGAGGAACCTACTTTTGAAAATACCATTGTGGCG CTGGATAAAAGTGGCGGGATTCTGGCGAGAGTAAGTGGGGTGTTTTTTGCATTGACCGAAGCGGATACAAATGATTCGTT GACGGCCTTGAATGAAAAGATGGCTCCTGTACTTTCAGAACATAGTGATAATATTTATTTGAATCAGGATTTGTATAAAC GGGTGGCTGATGTGCATCAACAGGAACAGGAAGGTAAGATAACTCTTACGACTGAGCAACACCGGCTGTTGGACAAGTAT TATAAAGCTTTTGTCCGTTCGGGTGCCGGACTGGATGCCGGAAAACAATCCCGTTTGAGGGAGATCAATAAAGAATTGTC GACTTTGGGGATTGCTTTCGACAATCATATCTTAAATGAGAATAACGCTTATCAGTTGGTTATCGAGAATGAGGCTGATT TGGCCGGGTTACCCGAATGGGTGAAAGCGGGGGCCGCAGAGGAAGCGAAAGCTGCTGGAAAAGAAGGGAAATGGCTATTC ACTTTGCAAAACTCCAGTCGCTTGCCTTTTTTGCAATATGCTGAAAACCGTGAGCTAAGAAAAAATATTTATGAAGCTTA TATCAACCGGGGGAATCATGATGATGCGAATGACAATAAAGAGATATTGGGAAAGATCATGGCATTGCGTTTGGAACAGG CAAAATTATTAGGATTCGATTGTTATTCCAATTTTGTACTGGATGAGAACATGGCTAAGAATTCGCAGACAGTCATGGAT TTCTTGAACAACCTGTGGGGATACTCACTGGAAAATGCAAAGAAAGAGGCCGCCGAGTTGCAGAAAATAATGGATAAGGA AGGTAAGGGAGAGAAGCTGGCTGCATGGGACTGGTGGTATTATGCCGAAAAATTGCGTCAGGAAAAGTATGATTTGAATG AAGATGAAATCAAGCCCTATTTCAGTTTGGAAGATGTGCGTAGCGGATTGTATACCGTGGCCAACAAGCTGTATGGCATT ACATTGACCGAACTGAATGATGTGCCCGTATATGAGCCGGATGTGAAAGTGTATGAAGTAAAGGATGCCGATGGCTCATT TTTGGGATTGTTCTATGCGGATTACTTTCCACGCGCAGGTAAGCGTGGTGGCGCATGGATGAGTAATTTTCGTGAACAGG CCGGTGAAGTACGTCCTTTAATTTATAATGTGGCAAGTTTTACTAAACCTGCAGGAAATATGCCTTCTTTACTGACTTTG GATGAGGTGGAAACCATGTTTCATGAGTTTGGACATGCATTGCACGGTATGCTGACCAAGTGTAACTACAAAGGAGTGTC CGGTACCAGTGTGGCGCAGGATTTTGTAGAACTTCCTTCACAGATTATGGAACATTGGGCTGTAGAACCTGAAGTGCTGA AACTCTATGCCAAGCATTATGAAACAAGAGAAGTGATTCCGGATGAGCTGATTACGAAAATCCAAAATCAGGGTACTTTT AATCAAGGTTTTATGACTACGGAATTATTGGCAGCCGCTTTGCTTGATATGGAACTGCATAACCTGACTGATACAGACAA TCTGAATGTCGTTGCTTTTGAAAAAGAAACGATGGACAAGCTGGGGCTGATTCCTGAAATAGCTCCTCGGTATCGCGCCA CTTATTTTAGTCATATTATAGGTGGATATGCTGCTGGGTATTACAGCTATCTATGGGCAGAAGTTCTTGACACGGATGCT TTTGAAGCGTTTAAAGAACATGGAGTGTTCGATAAAAATACCGCAGATTCTTTCCGTAAAAATATTCTAGAGAAAGGTGG AACGGAAGATCCTATGACCCTTTACAGAGGTTTTCGTGGGGCTGATCCCAGCTTGGAACCCTTGCTTAAAAACAGGGGTT TGAAATAA
Upstream 100 bases:
>100_bases ACCGTTGTACGGTGGATAATACGATAAAGAGTTCGGATCATTACCCCATTTGGTGTTATGTGGCGGAGAAGTGATTTTAC ATACCTTTAATTGACAGATT
Downstream 100 bases:
>100_bases AATAGACTGTGAGATAGAATAATTTAGGCTGCAAAAAATGCTTTTGCAGCCTTTTTTCTCTTTTGGAATCTAAATATTTG TGTTTGATACCGTGGGAATG
Product: peptidyl-dipeptidase
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MKRLLFTLATCCVMCACEQKTEMNPFFTEFQTEYGAPDFTKIRLEHYEPAFLKGIEEQNAEIKAIVDNPEEPTFENTIVA LDKSGGILARVSGVFFALTEADTNDSLTALNEKMAPVLSEHSDNIYLNQDLYKRVADVHQQEQEGKITLTTEQHRLLDKY YKAFVRSGAGLDAGKQSRLREINKELSTLGIAFDNHILNENNAYQLVIENEADLAGLPEWVKAGAAEEAKAAGKEGKWLF TLQNSSRLPFLQYAENRELRKNIYEAYINRGNHDDANDNKEILGKIMALRLEQAKLLGFDCYSNFVLDENMAKNSQTVMD FLNNLWGYSLENAKKEAAELQKIMDKEGKGEKLAAWDWWYYAEKLRQEKYDLNEDEIKPYFSLEDVRSGLYTVANKLYGI TLTELNDVPVYEPDVKVYEVKDADGSFLGLFYADYFPRAGKRGGAWMSNFREQAGEVRPLIYNVASFTKPAGNMPSLLTL DEVETMFHEFGHALHGMLTKCNYKGVSGTSVAQDFVELPSQIMEHWAVEPEVLKLYAKHYETREVIPDELITKIQNQGTF NQGFMTTELLAAALLDMELHNLTDTDNLNVVAFEKETMDKLGLIPEIAPRYRATYFSHIIGGYAAGYYSYLWAEVLDTDA FEAFKEHGVFDKNTADSFRKNILEKGGTEDPMTLYRGFRGADPSLEPLLKNRGLK
Sequences:
>Translated_695_residues MKRLLFTLATCCVMCACEQKTEMNPFFTEFQTEYGAPDFTKIRLEHYEPAFLKGIEEQNAEIKAIVDNPEEPTFENTIVA LDKSGGILARVSGVFFALTEADTNDSLTALNEKMAPVLSEHSDNIYLNQDLYKRVADVHQQEQEGKITLTTEQHRLLDKY YKAFVRSGAGLDAGKQSRLREINKELSTLGIAFDNHILNENNAYQLVIENEADLAGLPEWVKAGAAEEAKAAGKEGKWLF TLQNSSRLPFLQYAENRELRKNIYEAYINRGNHDDANDNKEILGKIMALRLEQAKLLGFDCYSNFVLDENMAKNSQTVMD FLNNLWGYSLENAKKEAAELQKIMDKEGKGEKLAAWDWWYYAEKLRQEKYDLNEDEIKPYFSLEDVRSGLYTVANKLYGI TLTELNDVPVYEPDVKVYEVKDADGSFLGLFYADYFPRAGKRGGAWMSNFREQAGEVRPLIYNVASFTKPAGNMPSLLTL DEVETMFHEFGHALHGMLTKCNYKGVSGTSVAQDFVELPSQIMEHWAVEPEVLKLYAKHYETREVIPDELITKIQNQGTF NQGFMTTELLAAALLDMELHNLTDTDNLNVVAFEKETMDKLGLIPEIAPRYRATYFSHIIGGYAAGYYSYLWAEVLDTDA FEAFKEHGVFDKNTADSFRKNILEKGGTEDPMTLYRGFRGADPSLEPLLKNRGLK >Mature_695_residues MKRLLFTLATCCVMCACEQKTEMNPFFTEFQTEYGAPDFTKIRLEHYEPAFLKGIEEQNAEIKAIVDNPEEPTFENTIVA LDKSGGILARVSGVFFALTEADTNDSLTALNEKMAPVLSEHSDNIYLNQDLYKRVADVHQQEQEGKITLTTEQHRLLDKY YKAFVRSGAGLDAGKQSRLREINKELSTLGIAFDNHILNENNAYQLVIENEADLAGLPEWVKAGAAEEAKAAGKEGKWLF TLQNSSRLPFLQYAENRELRKNIYEAYINRGNHDDANDNKEILGKIMALRLEQAKLLGFDCYSNFVLDENMAKNSQTVMD FLNNLWGYSLENAKKEAAELQKIMDKEGKGEKLAAWDWWYYAEKLRQEKYDLNEDEIKPYFSLEDVRSGLYTVANKLYGI TLTELNDVPVYEPDVKVYEVKDADGSFLGLFYADYFPRAGKRGGAWMSNFREQAGEVRPLIYNVASFTKPAGNMPSLLTL DEVETMFHEFGHALHGMLTKCNYKGVSGTSVAQDFVELPSQIMEHWAVEPEVLKLYAKHYETREVIPDELITKIQNQGTF NQGFMTTELLAAALLDMELHNLTDTDNLNVVAFEKETMDKLGLIPEIAPRYRATYFSHIIGGYAAGYYSYLWAEVLDTDA FEAFKEHGVFDKNTADSFRKNILEKGGTEDPMTLYRGFRGADPSLEPLLKNRGLK
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=594, Percent_Identity=33.3333333333333, Blast_Score=297, Evalue=3e-80, Organism=Homo sapiens, GI14149738, Length=641, Percent_Identity=30.1092043681747, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI156105687, Length=680, Percent_Identity=24.7058823529412, Blast_Score=183, Evalue=6e-46, Organism=Escherichia coli, GI1787819, Length=684, Percent_Identity=42.5438596491228, Blast_Score=549, Evalue=1e-157, Organism=Escherichia coli, GI1789913, Length=684, Percent_Identity=37.4269005847953, Blast_Score=428, Evalue=1e-121, Organism=Caenorhabditis elegans, GI71999758, Length=577, Percent_Identity=22.3570190641248, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI32565901, Length=468, Percent_Identity=22.6495726495727, Blast_Score=99, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6319793, Length=659, Percent_Identity=29.4385432473445, Blast_Score=222, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6322715, Length=552, Percent_Identity=24.8188405797101, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI21356111, Length=587, Percent_Identity=25.0425894378194, Blast_Score=177, Evalue=3e-44, Organism=Drosophila melanogaster, GI20129717, Length=447, Percent_Identity=26.8456375838926, Blast_Score=169, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 78971; Mature: 78971
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLFTLATCCVMCACEQKTEMNPFFTEFQTEYGAPDFTKIRLEHYEPAFLKGIEEQNA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHCHHHCCC EIKAIVDNPEEPTFENTIVALDKSGGILARVSGVFFALTEADTNDSLTALNEKMAPVLSE EEEEEECCCCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHC HSDNIYLNQDLYKRVADVHQQEQEGKITLTTEQHRLLDKYYKAFVRSGAGLDAGKQSRLR CCCCEEECHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EINKELSTLGIAFDNHILNENNAYQLVIENEADLAGLPEWVKAGAAEEAKAAGKEGKWLF HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCCEEE TLQNSSRLPFLQYAENRELRKNIYEAYINRGNHDDANDNKEILGKIMALRLEQAKLLGFD EECCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHH CYSNFVLDENMAKNSQTVMDFLNNLWGYSLENAKKEAAELQKIMDKEGKGEKLAAWDWWY HHHCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH YAEKLRQEKYDLNEDEIKPYFSLEDVRSGLYTVANKLYGITLTELNDVPVYEPDVKVYEV HHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEEEE KDADGSFLGLFYADYFPRAGKRGGAWMSNFREQAGEVRPLIYNVASFTKPAGNMPSLLTL ECCCCCEEHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEH DEVETMFHEFGHALHGMLTKCNYKGVSGTSVAQDFVELPSQIMEHWAVEPEVLKLYAKHY HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ETREVIPDELITKIQNQGTFNQGFMTTELLAAALLDMELHNLTDTDNLNVVAFEKETMDK HHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHH LGLIPEIAPRYRATYFSHIIGGYAAGYYSYLWAEVLDTDAFEAFKEHGVFDKNTADSFRK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH NILEKGGTEDPMTLYRGFRGADPSLEPLLKNRGLK HHHHCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MKRLLFTLATCCVMCACEQKTEMNPFFTEFQTEYGAPDFTKIRLEHYEPAFLKGIEEQNA CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHCHHHCCC EIKAIVDNPEEPTFENTIVALDKSGGILARVSGVFFALTEADTNDSLTALNEKMAPVLSE EEEEEECCCCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHC HSDNIYLNQDLYKRVADVHQQEQEGKITLTTEQHRLLDKYYKAFVRSGAGLDAGKQSRLR CCCCEEECHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EINKELSTLGIAFDNHILNENNAYQLVIENEADLAGLPEWVKAGAAEEAKAAGKEGKWLF HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCCEEE TLQNSSRLPFLQYAENRELRKNIYEAYINRGNHDDANDNKEILGKIMALRLEQAKLLGFD EECCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHH CYSNFVLDENMAKNSQTVMDFLNNLWGYSLENAKKEAAELQKIMDKEGKGEKLAAWDWWY HHHCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH YAEKLRQEKYDLNEDEIKPYFSLEDVRSGLYTVANKLYGITLTELNDVPVYEPDVKVYEV HHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEEEE KDADGSFLGLFYADYFPRAGKRGGAWMSNFREQAGEVRPLIYNVASFTKPAGNMPSLLTL ECCCCCEEHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEH DEVETMFHEFGHALHGMLTKCNYKGVSGTSVAQDFVELPSQIMEHWAVEPEVLKLYAKHY HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ETREVIPDELITKIQNQGTFNQGFMTTELLAAALLDMELHNLTDTDNLNVVAFEKETMDK HHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHH LGLIPEIAPRYRATYFSHIIGGYAAGYYSYLWAEVLDTDAFEAFKEHGVFDKNTADSFRK HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH NILEKGGTEDPMTLYRGFRGADPSLEPLLKNRGLK HHHHCCCCCCHHHHHHCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]