| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is korA [H]
Identifier: 150003552
GI number: 150003552
Start: 1293340
End: 1295187
Strand: Reverse
Name: korA [H]
Synonym: BVU_0979
Alternate gene names: 150003552
Gene position: 1295187-1293340 (Counterclockwise)
Preceding gene: 150003553
Following gene: 150003551
Centisome position: 25.09
GC content: 45.08
Gene sequence:
>1848_bases ATGGCAGATGAAATGATAGTCAAGGAGTTGGACCAAGTGGTGGTCCGTTTCTCAGGCGACTCAGGCGATGGTATGCAGCT GGCCGGAAATATCTTTTCTAATATTTCGGCTACAGTGGGAAATGATATCAGTACATTCCCCGATTACCCGGCGGATATAC GTGCCCCGCAAGGTTCGTTGACCGGTGTGTCAGGTTTCCAGGTGCATATCGGTGCGGGTAAAGTTTTTACCCCTGGTGAC AAATGCGACGTGCTGGTCGCAATGAATGCCGCTGCATTGAAAACACAATACAAATTTGCGAAGTCCACAGCTTGTATCAT TATTGATACAGATTGTTTTCAGAAATCAGATCTGGACAAGGCGGCTTTCAAAACAGACAATCCGATTGAAGAAATGGGTA TTAAGCAGGATGTAATTGCTGCTCCTATTTCGCAGATGGTGAAAGATTGTCTGGCAGATACAGGCATGGACAACAAGTCA ATGTTGAAATGTCGTAATATGTTTGCTTTGGGATTGGTCTGCTGGTTGTTTAATCGTGACCTGGCGGTTGCTGAAAATTT CTTGCGCGAGAAATTTGCAAAGAAGCCGCAAATAGCTGAAGCGAATATTAAAGTGATACACGCCGGATATGATTATGGGC ACAATACGCATGCGTCTGTGGATCATACTTATAAGGTGGAAACTAAGTCTAAAGTACCTGGAAAGTACATGGATATCAGC GGAAACAAGGCTACGGCTTATGGCTTAATTGCTGCTGCCGAGAAAGCAGGTCTGCGTTTGTTCCTGGGATCTTATCCCAT TACTCCGGCAACAGATATCTTGCATGAACTTTCTAAACATAAATCATTGGGAGTGACTACGGTTCAATGTGAAGATGAAA TTTCAGGTTGCGCTACGGCTATCGGTGCCTCGTTTGCAGGTGCGTTAGCAGCTACTTCTACTTCGGGACCGGGTGTTTGT CTGAAATCAGAGGCTATGAATCTGGCTGTTATTACAGAATTACCATTGGTGGTTATTAATGTACAGCGCGGCGGTCCTTC TACTGGTTTGCCTACTAAGTCTGAGCAAACAGATTTATTGCAGGCTTTGTTTGGCCGTAACGGTGAATCTCCTATGCCGG TCATTGCCGCAGCTTCTCCAACTCATTGTTTTGATGCTGCTTATGATGCTTGTAAGATTGCCTTGGAACACATGACCCCG GTGGTGTTGCTGACTGATGGTTTTGTAGCAAATGGTTCCGGTGCATGGAAGTTGCCTGATCTGGCGAACTATCCGGCTAT TAACCCACCCTATGTTACTCCGGAAATGAAGGATAATTATACTCCTTACAAGCGTAACGCCGAAACAGGTGTCCGTTATT GGGCATTGCCGGGACAGGAAGGTTATATGCATATTTTGGGAGGCTTGGAAAAAGACAGTGATACAGGTGCTATTTCTACC GAGCCTGAAAACCATAATTTGATGTGCCGTTTGCGTGCCGAGAAGGTTGCTAAAATTCCAGTGCCTGATGTTAAGGTGCA AGGCTGCGTAGAGGATGCAGATTTGCTGATAGTAGGTTTCGGTGGAACTTACGGTCATTTATATTCAGCAATGGAGGAAA TGAACCATGCGGGCAAGAAGGTTGCTTTGGCACATTTTGTTCATTTGAACCCGCTGCCTCACAATACGGCAGAAGTGCTG AAGAAATATAAGAAGGTAGTCGTGGCTGAGCAGAATCTTGGTCAGTTTGCCGGATATCTCCGTATGAAAGTGGACGGATT TGTTCCTTATCAGTTTAATGAGGTAAAAGGCCAGCCGTTCGTAGTCAGCGAGTTAGTTGATGCTTTCACTGAGATTTTAA ATAAATAA
Upstream 100 bases:
>100_bases TTGATATTCAAACGTAGTTTGATAGCGGAATATTTTGTCCTTTGACAGAACTTTCCGAACTTTGCAAACAGTGAAATTTT GTAACCCTAAATAATAAGTT
Downstream 100 bases:
>100_bases TAACCGTAAAGAAAGTAAAGACTATGAACGAATATACAGCAAAAGATTTCAAAAAGGGACAACCTCGCTGGTGTCCGGGT TGCGGTGACCATTTTTTCTT
Product: 2-oxoglutarate synthase subunit korA
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MADEMIVKELDQVVVRFSGDSGDGMQLAGNIFSNISATVGNDISTFPDYPADIRAPQGSLTGVSGFQVHIGAGKVFTPGD KCDVLVAMNAAALKTQYKFAKSTACIIIDTDCFQKSDLDKAAFKTDNPIEEMGIKQDVIAAPISQMVKDCLADTGMDNKS MLKCRNMFALGLVCWLFNRDLAVAENFLREKFAKKPQIAEANIKVIHAGYDYGHNTHASVDHTYKVETKSKVPGKYMDIS GNKATAYGLIAAAEKAGLRLFLGSYPITPATDILHELSKHKSLGVTTVQCEDEISGCATAIGASFAGALAATSTSGPGVC LKSEAMNLAVITELPLVVINVQRGGPSTGLPTKSEQTDLLQALFGRNGESPMPVIAAASPTHCFDAAYDACKIALEHMTP VVLLTDGFVANGSGAWKLPDLANYPAINPPYVTPEMKDNYTPYKRNAETGVRYWALPGQEGYMHILGGLEKDSDTGAIST EPENHNLMCRLRAEKVAKIPVPDVKVQGCVEDADLLIVGFGGTYGHLYSAMEEMNHAGKKVALAHFVHLNPLPHNTAEVL KKYKKVVVAEQNLGQFAGYLRMKVDGFVPYQFNEVKGQPFVVSELVDAFTEILNK
Sequences:
>Translated_615_residues MADEMIVKELDQVVVRFSGDSGDGMQLAGNIFSNISATVGNDISTFPDYPADIRAPQGSLTGVSGFQVHIGAGKVFTPGD KCDVLVAMNAAALKTQYKFAKSTACIIIDTDCFQKSDLDKAAFKTDNPIEEMGIKQDVIAAPISQMVKDCLADTGMDNKS MLKCRNMFALGLVCWLFNRDLAVAENFLREKFAKKPQIAEANIKVIHAGYDYGHNTHASVDHTYKVETKSKVPGKYMDIS GNKATAYGLIAAAEKAGLRLFLGSYPITPATDILHELSKHKSLGVTTVQCEDEISGCATAIGASFAGALAATSTSGPGVC LKSEAMNLAVITELPLVVINVQRGGPSTGLPTKSEQTDLLQALFGRNGESPMPVIAAASPTHCFDAAYDACKIALEHMTP VVLLTDGFVANGSGAWKLPDLANYPAINPPYVTPEMKDNYTPYKRNAETGVRYWALPGQEGYMHILGGLEKDSDTGAIST EPENHNLMCRLRAEKVAKIPVPDVKVQGCVEDADLLIVGFGGTYGHLYSAMEEMNHAGKKVALAHFVHLNPLPHNTAEVL KKYKKVVVAEQNLGQFAGYLRMKVDGFVPYQFNEVKGQPFVVSELVDAFTEILNK >Mature_614_residues ADEMIVKELDQVVVRFSGDSGDGMQLAGNIFSNISATVGNDISTFPDYPADIRAPQGSLTGVSGFQVHIGAGKVFTPGDK CDVLVAMNAAALKTQYKFAKSTACIIIDTDCFQKSDLDKAAFKTDNPIEEMGIKQDVIAAPISQMVKDCLADTGMDNKSM LKCRNMFALGLVCWLFNRDLAVAENFLREKFAKKPQIAEANIKVIHAGYDYGHNTHASVDHTYKVETKSKVPGKYMDISG NKATAYGLIAAAEKAGLRLFLGSYPITPATDILHELSKHKSLGVTTVQCEDEISGCATAIGASFAGALAATSTSGPGVCL KSEAMNLAVITELPLVVINVQRGGPSTGLPTKSEQTDLLQALFGRNGESPMPVIAAASPTHCFDAAYDACKIALEHMTPV VLLTDGFVANGSGAWKLPDLANYPAINPPYVTPEMKDNYTPYKRNAETGVRYWALPGQEGYMHILGGLEKDSDTGAISTE PENHNLMCRLRAEKVAKIPVPDVKVQGCVEDADLLIVGFGGTYGHLYSAMEEMNHAGKKVALAHFVHLNPLPHNTAEVLK KYKKVVVAEQNLGQFAGYLRMKVDGFVPYQFNEVKGQPFVVSELVDAFTEILNK
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 66245; Mature: 66113
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADEMIVKELDQVVVRFSGDSGDGMQLAGNIFSNISATVGNDISTFPDYPADIRAPQGSL CCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC TGVSGFQVHIGAGKVFTPGDKCDVLVAMNAAALKTQYKFAKSTACIIIDTDCFQKSDLDK CCCCCEEEEECCCEEECCCCCCCEEEEECHHHHHHHHHHHCCCEEEEEECCCCCCCCCCH AAFKTDNPIEEMGIKQDVIAAPISQMVKDCLADTGMDNKSMLKCRNMFALGLVCWLFNRD HHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC LAVAENFLREKFAKKPQIAEANIKVIHAGYDYGHNTHASVDHTYKVETKSKVPGKYMDIS HHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECC GNKATAYGLIAAAEKAGLRLFLGSYPITPATDILHELSKHKSLGVTTVQCEDEISGCATA CCCCCHHHEEEHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH IGASFAGALAATSTSGPGVCLKSEAMNLAVITELPLVVINVQRGGPSTGLPTKSEQTDLL HHHHHHHHHEECCCCCCCEEEECCCCCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHH QALFGRNGESPMPVIAAASPTHCFDAAYDACKIALEHMTPVVLLTDGFVANGSGAWKLPD HHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEECCC LANYPAINPPYVTPEMKDNYTPYKRNAETGVRYWALPGQEGYMHILGGLEKDSDTGAIST CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEC EPENHNLMCRLRAEKVAKIPVPDVKVQGCVEDADLLIVGFGGTYGHLYSAMEEMNHAGKK CCCCCCEEEEEECHHEEECCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCC VALAHFVHLNPLPHNTAEVLKKYKKVVVAEQNLGQFAGYLRMKVDGFVPYQFNEVKGQPF EEEEEEEEECCCCCCHHHHHHHHHHHEEEHHHHHHHHHEEEEEECCCCCEECCCCCCCCC VVSELVDAFTEILNK HHHHHHHHHHHHHCC >Mature Secondary Structure ADEMIVKELDQVVVRFSGDSGDGMQLAGNIFSNISATVGNDISTFPDYPADIRAPQGSL CCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC TGVSGFQVHIGAGKVFTPGDKCDVLVAMNAAALKTQYKFAKSTACIIIDTDCFQKSDLDK CCCCCEEEEECCCEEECCCCCCCEEEEECHHHHHHHHHHHCCCEEEEEECCCCCCCCCCH AAFKTDNPIEEMGIKQDVIAAPISQMVKDCLADTGMDNKSMLKCRNMFALGLVCWLFNRD HHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC LAVAENFLREKFAKKPQIAEANIKVIHAGYDYGHNTHASVDHTYKVETKSKVPGKYMDIS HHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECC GNKATAYGLIAAAEKAGLRLFLGSYPITPATDILHELSKHKSLGVTTVQCEDEISGCATA CCCCCHHHEEEHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHH IGASFAGALAATSTSGPGVCLKSEAMNLAVITELPLVVINVQRGGPSTGLPTKSEQTDLL HHHHHHHHHEECCCCCCCEEEECCCCCEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHH QALFGRNGESPMPVIAAASPTHCFDAAYDACKIALEHMTPVVLLTDGFVANGSGAWKLPD HHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEECCC LANYPAINPPYVTPEMKDNYTPYKRNAETGVRYWALPGQEGYMHILGGLEKDSDTGAIST CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCEEC EPENHNLMCRLRAEKVAKIPVPDVKVQGCVEDADLLIVGFGGTYGHLYSAMEEMNHAGKK CCCCCCEEEEEECHHEEECCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCC VALAHFVHLNPLPHNTAEVLKKYKKVVVAEQNLGQFAGYLRMKVDGFVPYQFNEVKGQPF EEEEEEEEECCCCCCHHHHHHHHHHHEEEHHHHHHHHHEEEEEECCCCCEECCCCCCCCC VVSELVDAFTEILNK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9108258 [H]