| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003518
Identifier: 150003518
GI number: 150003518
Start: 1244452
End: 1245405
Strand: Direct
Name: 150003518
Synonym: BVU_0945
Alternate gene names: NA
Gene position: 1244452-1245405 (Clockwise)
Preceding gene: 150003516
Following gene: 150003519
Centisome position: 24.1
GC content: 35.85
Gene sequence:
>954_bases ATGAAAATTGATAATAGAAAAACGTTCATAAAAAGATTGCTCTCAGGGACGATGTCCAAAGAGCAACGCAAGATATTTAT CCAATTGGATGAGATAGATTTTCAGCTTAGAAAACAATGGGACGAAGCGGGCAATGAGTCCATTGATTGGCAAATGAAAG AGCAAATTTGGAGAAACATCAAAAATAAACAAGATAATAAAAACCGAAGATTCTTTCAAATGTTTCCCAAATGGCAAATG ATAGCTGCAACGGTGACCCTCTTGTTGATCACGTCTGCTGGATTGTGGTTTGCCAAACAACAAGCCGGTTGTGTGAATGA CTTTATTGAAGTGACTGCACAGGAATCCCAACTGTACACATTGCCAGACAGTTCGAAAGTATGGATGCAGAAAGGAAGTA GTCTGCGATATGCCAAGGCATTTCTCAAGGACCGAAAAGTCTGGCTGAAGGGGAATTCATTCTTTGAGGTAATGCGTCAG AATGGGGTTCCATTTCAAGTCTACATTAATCAGGGCATGATAGAAGTAAAAGGAACCAGCTTTGATATTCACCAGAATCA AAACCAGCAGACAAATGAAATTATTTTGTTTTGTGGAAAGGTGGATTTTACAGCGGAAAATCATGAAACCATTGAAATGC AACCATTTCAAAAATTAACATATTATATTAAGAAGGATAATATAACAAAGGAATGGTTGAGAAATATTAAATACAAAAAT GGCAGTCTTCAGTTTACGAATCTTCCCTTGAAACAATTGATTGAGACAATCAACAGCAGGTATAACAGTAACATCAAGTT GGAAGGAATCAACCTTAAACAACAGTCTGCCTTTACAGGAAAAATCCGCTTAGAAGAATCACTGAAAGATGTCTTACAGA AAATTTGTTATAGTCTTAGTCTCGAAATGAAAGCAAATGGTAATGAGATAATTATTTATAAAAACAATCATTAA
Upstream 100 bases:
>100_bases AAAATTCTAATCAGAAAAATATTTTTTTCAAATCCGATGTGGGGGGAAAAGGGTTTCAGGTGTATTTATTATAGATGCAC GTAAAAAGATATTTATAGGT
Downstream 100 bases:
>100_bases AACAAGTAAACCTAATGTTAAACTTTAAAAAAAACAGAATGAAGAAACACACTTTTTGTCGTTTTTCGATACTGTTAAGT ATCATCCTTGTTTTTCTTCT
Product: putative anti-sigma factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKIDNRKTFIKRLLSGTMSKEQRKIFIQLDEIDFQLRKQWDEAGNESIDWQMKEQIWRNIKNKQDNKNRRFFQMFPKWQM IAATVTLLLITSAGLWFAKQQAGCVNDFIEVTAQESQLYTLPDSSKVWMQKGSSLRYAKAFLKDRKVWLKGNSFFEVMRQ NGVPFQVYINQGMIEVKGTSFDIHQNQNQQTNEIILFCGKVDFTAENHETIEMQPFQKLTYYIKKDNITKEWLRNIKYKN GSLQFTNLPLKQLIETINSRYNSNIKLEGINLKQQSAFTGKIRLEESLKDVLQKICYSLSLEMKANGNEIIIYKNNH
Sequences:
>Translated_317_residues MKIDNRKTFIKRLLSGTMSKEQRKIFIQLDEIDFQLRKQWDEAGNESIDWQMKEQIWRNIKNKQDNKNRRFFQMFPKWQM IAATVTLLLITSAGLWFAKQQAGCVNDFIEVTAQESQLYTLPDSSKVWMQKGSSLRYAKAFLKDRKVWLKGNSFFEVMRQ NGVPFQVYINQGMIEVKGTSFDIHQNQNQQTNEIILFCGKVDFTAENHETIEMQPFQKLTYYIKKDNITKEWLRNIKYKN GSLQFTNLPLKQLIETINSRYNSNIKLEGINLKQQSAFTGKIRLEESLKDVLQKICYSLSLEMKANGNEIIIYKNNH >Mature_317_residues MKIDNRKTFIKRLLSGTMSKEQRKIFIQLDEIDFQLRKQWDEAGNESIDWQMKEQIWRNIKNKQDNKNRRFFQMFPKWQM IAATVTLLLITSAGLWFAKQQAGCVNDFIEVTAQESQLYTLPDSSKVWMQKGSSLRYAKAFLKDRKVWLKGNSFFEVMRQ NGVPFQVYINQGMIEVKGTSFDIHQNQNQQTNEIILFCGKVDFTAENHETIEMQPFQKLTYYIKKDNITKEWLRNIKYKN GSLQFTNLPLKQLIETINSRYNSNIKLEGINLKQQSAFTGKIRLEESLKDVLQKICYSLSLEMKANGNEIIIYKNNH
Specific function: Unknown
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37430; Mature: 37430
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDNRKTFIKRLLSGTMSKEQRKIFIQLDEIDFQLRKQWDEAGNESIDWQMKEQIWRNI CCCCHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KNKQDNKNRRFFQMFPKWQMIAATVTLLLITSAGLWFAKQQAGCVNDFIEVTAQESQLYT CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHEECCCEEEE LPDSSKVWMQKGSSLRYAKAFLKDRKVWLKGNSFFEVMRQNGVPFQVYINQGMIEVKGTS CCCCCHHHHHCCCCHHHHHHHHHCCEEEEECCHHHHHHHHCCCEEEEEEECCEEEEECCE FDIHQNQNQQTNEIILFCGKVDFTAENHETIEMQPFQKLTYYIKKDNITKEWLRNIKYKN EEECCCCCCCCCEEEEEEECEEECCCCCCEEEECCHHHEEEEEECCCCHHHHHHCCCCCC GSLQFTNLPLKQLIETINSRYNSNIKLEGINLKQQSAFTGKIRLEESLKDVLQKICYSLS CCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHEE LEMKANGNEIIIYKNNH EEEECCCCEEEEEECCC >Mature Secondary Structure MKIDNRKTFIKRLLSGTMSKEQRKIFIQLDEIDFQLRKQWDEAGNESIDWQMKEQIWRNI CCCCHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KNKQDNKNRRFFQMFPKWQMIAATVTLLLITSAGLWFAKQQAGCVNDFIEVTAQESQLYT CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHHEECCCEEEE LPDSSKVWMQKGSSLRYAKAFLKDRKVWLKGNSFFEVMRQNGVPFQVYINQGMIEVKGTS CCCCCHHHHHCCCCHHHHHHHHHCCEEEEECCHHHHHHHHCCCEEEEEEECCEEEEECCE FDIHQNQNQQTNEIILFCGKVDFTAENHETIEMQPFQKLTYYIKKDNITKEWLRNIKYKN EEECCCCCCCCCEEEEEEECEEECCCCCCEEEECCHHHEEEEEECCCCHHHHHHCCCCCC GSLQFTNLPLKQLIETINSRYNSNIKLEGINLKQQSAFTGKIRLEESLKDVLQKICYSLS CCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHEE LEMKANGNEIIIYKNNH EEEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA