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The map label for this gene is 150003517

Identifier: 150003517

GI number: 150003517

Start: 1243619

End: 1244167

Strand: Reverse

Name: 150003517

Synonym: BVU_0944

Alternate gene names: NA

Gene position: 1244167-1243619 (Counterclockwise)

Preceding gene: 150003524

Following gene: 150003512

Centisome position: 24.1

GC content: 38.62

Gene sequence:

>549_bases
ATGAAAGAGAAAGTGATACTAAATAGAATGAAGGCAGGTGATGAAGAAGCATTTGCCTGGCTGTATAACCATTATTGGCA
AAAGGTTTATCATTTTGCTCGGCTCTATTTGACCTCTTCTTCCGAAATCTCAGAAGCTGTGCAAGACGTTTTTCTGCATG
TTTGGGAGGCAAGAGAAACCTTTGACAACAGCAAGAATTTTGACGGTTATCTCTTTATTATTACCCGCAACATCATATTT
AATTATTCAAGGCGTTATTTTAATGAACTCAATTTTAAAATGACTGTATTGCAAAGCATGGAAGAAGGTTATAGTATAGA
AGAAGAACTGGATGCACGGGATTTAAAGAGGTATATTGATAAGCTAGTAGTCCAACTACCTGCTAATCGGCAACGTATTT
TCCGCATGAGCCGCGAACTGCACCTAAGCAATAAGCAGATAGCAGAACAGTGTGCCATAACAGAAAAAGCCGTGGAACGT
CAGATTACCTTAGCCTTGAAATTTATCCGAGATAATCTTCCGTTCTTTGTGCTCTTCATGCGCTTTTAA

Upstream 100 bases:

>100_bases
CCTTTTTACCGTTTAGTCAAATAAAAGGCTTAAGTTTTTTTTAATTAATCATTTTTTAATTAATTAATTTTTATAACTTT
GTGGTTGTATTCCTAAATAA

Downstream 100 bases:

>100_bases
TCTGAGTCTTCTGTTCCCTGTTTCTGCCAATGGTCGGTGCGAAAAGGAGTCACTAGCAGACCGAACCTAGGAAAAAGGTT
ATTGTGAGTAGTACCTGCCC

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma-70 Factor; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor Sigma-70 Family; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma Factor; Sigma Factor; RNA Polymerase Sigma-W Factor; ECF-Type RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-70 Factor; ECF-Type RNA Polymerase; RNA Polymerase ECF-Type Sigma Factor Family Protein; RNA Polymerase ECF Sigma Factor; ECF-Type Sigma Factor

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKEKVILNRMKAGDEEAFAWLYNHYWQKVYHFARLYLTSSSEISEAVQDVFLHVWEARETFDNSKNFDGYLFIITRNIIF
NYSRRYFNELNFKMTVLQSMEEGYSIEEELDARDLKRYIDKLVVQLPANRQRIFRMSRELHLSNKQIAEQCAITEKAVER
QITLALKFIRDNLPFFVLFMRF

Sequences:

>Translated_182_residues
MKEKVILNRMKAGDEEAFAWLYNHYWQKVYHFARLYLTSSSEISEAVQDVFLHVWEARETFDNSKNFDGYLFIITRNIIF
NYSRRYFNELNFKMTVLQSMEEGYSIEEELDARDLKRYIDKLVVQLPANRQRIFRMSRELHLSNKQIAEQCAITEKAVER
QITLALKFIRDNLPFFVLFMRF
>Mature_182_residues
MKEKVILNRMKAGDEEAFAWLYNHYWQKVYHFARLYLTSSSEISEAVQDVFLHVWEARETFDNSKNFDGYLFIITRNIIF
NYSRRYFNELNFKMTVLQSMEEGYSIEEELDARDLKRYIDKLVVQLPANRQRIFRMSRELHLSNKQIAEQCAITEKAVER
QITLALKFIRDNLPFFVLFMRF

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22036; Mature: 22036

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKVILNRMKAGDEEAFAWLYNHYWQKVYHFARLYLTSSSEISEAVQDVFLHVWEARET
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FDNSKNFDGYLFIITRNIIFNYSRRYFNELNFKMTVLQSMEEGYSIEEELDARDLKRYID
HCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHH
KLVVQLPANRQRIFRMSRELHLSNKQIAEQCAITEKAVERQITLALKFIRDNLPFFVLFM
HHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEE
RF
CC
>Mature Secondary Structure
MKEKVILNRMKAGDEEAFAWLYNHYWQKVYHFARLYLTSSSEISEAVQDVFLHVWEARET
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FDNSKNFDGYLFIITRNIIFNYSRRYFNELNFKMTVLQSMEEGYSIEEELDARDLKRYID
HCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHH
KLVVQLPANRQRIFRMSRELHLSNKQIAEQCAITEKAVERQITLALKFIRDNLPFFVLFM
HHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEE
RF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA