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The map label for this gene is yebA [C]

Identifier: 150003514

GI number: 150003514

Start: 1240496

End: 1241056

Strand: Direct

Name: yebA [C]

Synonym: BVU_0941

Alternate gene names: 150003514

Gene position: 1240496-1241056 (Clockwise)

Preceding gene: 150003513

Following gene: 150003515

Centisome position: 24.03

GC content: 51.16

Gene sequence:

>561_bases
ATGAAACTGCTGATGCTCATATTGTTCTTCCCCTTTTCTTTCGAGGGGGAAAACGGAAGGGAACTGCTCGATACGGCACT
GGAAAAATGCAGCCGTCTGGAAAGCCTGGAAGCTTGCCGGGACATACTTTACCGGTACGGGGTGGCAGACAGGCTCCCTC
TGTCATGTCCCCTGAAAGACAAGTTCAGGATAAGCAGCCCGTATGGAGGCAGGATTCATCCCATAACGGGAAAACATAGT
TTTCATTCGGGAGTCGATATGGCGGTGGAGCTGGCCGCACCGGTCCATGCCACCGCTTCCGGTACGGTCGTTTTCGCAGG
AAGGAAGGGAGGCTATGGAAGATGCGTCATCATACGGCATTCCTACGGCTTTGAAACGCTTTACGCACATCTGGCAGCTT
ACTATACGACGGAGGGCAAAAAGCTCGGGAAAGGGGCTGTTATCGGCTTTGCCGGGAGCACGGGCAGAAGCACAGGCTAT
CATCTGCATTATGAGATAAGAAAGAACGGTAGAACTATAAAACCATACTGGTATGGATATGACAATTCAGGAAGAGATTG
A

Upstream 100 bases:

>100_bases
TTAAAAACAAGTCACTTCTGGGAGCGGAGGAAGTGTTCAGAAGCCTGCAGGAGCAGAAAACGGAAGATGAAGCGGACAGG
ATATTAAGGAGGATATCCAG

Downstream 100 bases:

>100_bases
ACAGCTTGTATTAAGATGCATCGCCGCCGACGGGCTGAAGGCATGCCCGAAGGATATTTCCTTTCTTGAGAAATACAGGC
TGAAGAACCTGTACTTCCTC

Product: putative peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKLLMLILFFPFSFEGENGRELLDTALEKCSRLESLEACRDILYRYGVADRLPLSCPLKDKFRISSPYGGRIHPITGKHS
FHSGVDMAVELAAPVHATASGTVVFAGRKGGYGRCVIIRHSYGFETLYAHLAAYYTTEGKKLGKGAVIGFAGSTGRSTGY
HLHYEIRKNGRTIKPYWYGYDNSGRD

Sequences:

>Translated_186_residues
MKLLMLILFFPFSFEGENGRELLDTALEKCSRLESLEACRDILYRYGVADRLPLSCPLKDKFRISSPYGGRIHPITGKHS
FHSGVDMAVELAAPVHATASGTVVFAGRKGGYGRCVIIRHSYGFETLYAHLAAYYTTEGKKLGKGAVIGFAGSTGRSTGY
HLHYEIRKNGRTIKPYWYGYDNSGRD
>Mature_186_residues
MKLLMLILFFPFSFEGENGRELLDTALEKCSRLESLEACRDILYRYGVADRLPLSCPLKDKFRISSPYGGRIHPITGKHS
FHSGVDMAVELAAPVHATASGTVVFAGRKGGYGRCVIIRHSYGFETLYAHLAAYYTTEGKKLGKGAVIGFAGSTGRSTGY
HLHYEIRKNGRTIKPYWYGYDNSGRD

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=123, Percent_Identity=41.4634146341463, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1789099, Length=98, Percent_Identity=36.734693877551, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 20681; Mature: 20681

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00052 RIBOSOMAL_S7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLMLILFFPFSFEGENGRELLDTALEKCSRLESLEACRDILYRYGVADRLPLSCPLKD
CHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
KFRISSPYGGRIHPITGKHSFHSGVDMAVELAAPVHATASGTVVFAGRKGGYGRCVIIRH
CEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEE
SYGFETLYAHLAAYYTTEGKKLGKGAVIGFAGSTGRSTGYHLHYEIRKNGRTIKPYWYGY
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEECCEEECC
DNSGRD
CCCCCC
>Mature Secondary Structure
MKLLMLILFFPFSFEGENGRELLDTALEKCSRLESLEACRDILYRYGVADRLPLSCPLKD
CHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
KFRISSPYGGRIHPITGKHSFHSGVDMAVELAAPVHATASGTVVFAGRKGGYGRCVIIRH
CEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEE
SYGFETLYAHLAAYYTTEGKKLGKGAVIGFAGSTGRSTGYHLHYEIRKNGRTIKPYWYGY
CCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEECCEEECC
DNSGRD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]