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The map label for this gene is tnpA [H]

Identifier: 150003483

GI number: 150003483

Start: 1217228

End: 1217587

Strand: Direct

Name: tnpA [H]

Synonym: BVU_0910

Alternate gene names: 150003483

Gene position: 1217228-1217587 (Clockwise)

Preceding gene: 150003482

Following gene: 150003484

Centisome position: 23.58

GC content: 50.28

Gene sequence:

>360_bases
ATGGATGCGGCAAATTTAACAGAAAAATACATATTATGGAGCAATATCCTTGATCTTCGTTCACGGGGAATCAACATTGC
GCGGACAGCCCGTCGTCTTGGTGTGTCCCGTAATACGGTACGACATCTTCAATCCCTAAGCTTGGAGGAAGTCCTCCAGC
ACAAAGAACGGCATTACAAACTCCATGCCTACGAGCAGGCCGTCGCATCCCTCCTTACCAGTTTTCCCTCCATTTCCAGC
AGCCGCATTGGCGACTACTTGCGGGAACATTATCCGGACTTTCCGCACGTCTGCGAGAAGACCGTCCACAATTATGTCCA
GTTCGTCCGGAAGAAGCACCATATTCCTCCGGCCAGATAA

Upstream 100 bases:

>100_bases
CCTTATTATGTAGTTTTTGTCTATCATGAGGGCGGTAATTTAGCTGCATCAAAGATTCGTAATCTGGAATGTCCCAGTTA
CGAAATCTGTCTAATAGATT

Downstream 100 bases:

>100_bases
TCACCGGTCCCATTCTCCCAAGGAGTGGGAGCCCGGTCCGTCATATACATAATTCTTAACAGTAAACATTATACATTATC
ATATATGAATACCCAAAGCT

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDAANLTEKYILWSNILDLRSRGINIARTARRLGVSRNTVRHLQSLSLEEVLQHKERHYKLHAYEQAVASLLTSFPSISS
SRIGDYLREHYPDFPHVCEKTVHNYVQFVRKKHHIPPAR

Sequences:

>Translated_119_residues
MDAANLTEKYILWSNILDLRSRGINIARTARRLGVSRNTVRHLQSLSLEEVLQHKERHYKLHAYEQAVASLLTSFPSISS
SRIGDYLREHYPDFPHVCEKTVHNYVQFVRKKHHIPPAR
>Mature_119_residues
MDAANLTEKYILWSNILDLRSRGINIARTARRLGVSRNTVRHLQSLSLEEVLQHKERHYKLHAYEQAVASLLTSFPSISS
SRIGDYLREHYPDFPHVCEKTVHNYVQFVRKKHHIPPAR

Specific function: Involved in the transposition of the insertion sequence (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 13929; Mature: 13929

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAANLTEKYILWSNILDLRSRGINIARTARRLGVSRNTVRHLQSLSLEEVLQHKERHYK
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
LHAYEQAVASLLTSFPSISSSRIGDYLREHYPDFPHVCEKTVHNYVQFVRKKHHIPPAR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDAANLTEKYILWSNILDLRSRGINIARTARRLGVSRNTVRHLQSLSLEEVLQHKERHYK
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
LHAYEQAVASLLTSFPSISSSRIGDYLREHYPDFPHVCEKTVHNYVQFVRKKHHIPPAR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517394 [H]