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The map label for this gene is secY [H]

Identifier: 150003367

GI number: 150003367

Start: 1091072

End: 1092418

Strand: Reverse

Name: secY [H]

Synonym: BVU_0785

Alternate gene names: 150003367

Gene position: 1092418-1091072 (Counterclockwise)

Preceding gene: 150003368

Following gene: 150003366

Centisome position: 21.16

GC content: 38.31

Gene sequence:

>1347_bases
ATGAGAAAATCTATTGAAACATTAAAGAATATATGGAAAATTGAGGATCTGAGACAAAGGATCCTCATTACTATATTATT
TGTTGCAATTTACAGGTTTGGTTCTTACGTGGTTCTGCCAGGTATTAACCCTGCTATGTTAACTCAGTTGCATAAACAAA
CGAGTGAAGGTTTGTTAGCCTTGTTAAACATGTTCTCTGGAGGAGCGTTTTCCAATGCATCTATTTTTGCATTGGGAATC
ATGCCATATATCTCGGCATCAATTGTAATTCAGCTTTTGGCGATTGCTGTTCCCTACTTTCAGAAAATCCAGCGTGAAGG
TGAAAGTGGTAGAAGAAAAATCAATCAGTATACTCGTATATTGACAATTGCAATTTTGGTTTTCCAAGCTCCCTCATACT
TGCTTAACCTTAAGATGCAAGCCGGACCATCACTTAATGCTTCATTAGATTGGACATTCTTTATAATTACTTCTACCATC
ATTTTGGCAGCTGGAAGTATGTTTATTCTGTGGCTTGGAGAAAGAATAACAGATAAGGGGATAGGTAATGGTATATCATT
CATCATTTTGATTGGTATTATTGCCCGTCTGCCACAATCTTTATTCCAGGAGTTTGTTTCTCGTCTGGCTTCTCCGGGTG
CAGGTGGTATCATCATGTTTTTGTTGGAAATAGTATTTTTGTTGTTCGTTATTGCAGCAGCAATTTTGCTGGTTCAAGGC
GTCCGCAAAGTTCCCGTACAGTATGCGAAACGTATTGTAGGAAACAAACAATATGGTGGTGCAAGACAATATATTCCTTT
AAAGGTGAATGCTGCGAATGTAATGCCTATCATCTTTGCCCAGGCAATCATGTTTATCCCTATTACATTGGTAGGTTTCT
CAAATGCTGCAACAGCAAGTGGTATTGTACGTGCATTTGTAGATCATACTAGCTTCTGGTATAATTTTGTTTTTGCAATA
TTGATTATTGTGTTTACATACTTCTATACTGCAATAACAATTAATCCTAACCAGATGGCAGAAGATATGAAGAGAAATAA
TGGTTTTATTCCGGGAATAAAACCAGGTAAGAATACAGCTGAGTATATAGATGCGATCATGTCTCGTATTACTCTGCCGG
GTTCTATATTCTTGGCTCTTGTAGCCATCATGCCTGCATTTGCCGGTATTTTTGGAGTAAAAGCTGAGTTCGCCCAGTTC
TTCGGTGGTACATCCTTATTGATTCTTGTAGGTGTTGTATTGGATACACTCCAACAGGTAGAAAGTCATTTGCTGATGCG
CCATTACGACGGATTGTTAAATTCCGGAAGAATCAAGGGGCGTGCTGGTAATGTTGCTGCATATTAA

Upstream 100 bases:

>100_bases
AGTTTGACTACTAAGCTTGATGTGGAAGCTAATGCTTTTTCAAAGAGTGCGGTAGCTGCAATCGAAGCTGTTGGTGGTAA
TGCAGTAAAACTCTGATTCA

Downstream 100 bases:

>100_bases
TTAGTCTGAGATGATATTTCTTAAGACAGATGATGAGATAGAGCTGCTTCGTCAGAGTAACCTACTTGTAGGTAGGACTC
TGGCTGAAGTTGCTAAATTG

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MRKSIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLTQLHKQTSEGLLALLNMFSGGAFSNASIFALGI
MPYISASIVIQLLAIAVPYFQKIQREGESGRRKINQYTRILTIAILVFQAPSYLLNLKMQAGPSLNASLDWTFFIITSTI
ILAAGSMFILWLGERITDKGIGNGISFIILIGIIARLPQSLFQEFVSRLASPGAGGIIMFLLEIVFLLFVIAAAILLVQG
VRKVPVQYAKRIVGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPITLVGFSNAATASGIVRAFVDHTSFWYNFVFAI
LIIVFTYFYTAITINPNQMAEDMKRNNGFIPGIKPGKNTAEYIDAIMSRITLPGSIFLALVAIMPAFAGIFGVKAEFAQF
FGGTSLLILVGVVLDTLQQVESHLLMRHYDGLLNSGRIKGRAGNVAAY

Sequences:

>Translated_448_residues
MRKSIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLTQLHKQTSEGLLALLNMFSGGAFSNASIFALGI
MPYISASIVIQLLAIAVPYFQKIQREGESGRRKINQYTRILTIAILVFQAPSYLLNLKMQAGPSLNASLDWTFFIITSTI
ILAAGSMFILWLGERITDKGIGNGISFIILIGIIARLPQSLFQEFVSRLASPGAGGIIMFLLEIVFLLFVIAAAILLVQG
VRKVPVQYAKRIVGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPITLVGFSNAATASGIVRAFVDHTSFWYNFVFAI
LIIVFTYFYTAITINPNQMAEDMKRNNGFIPGIKPGKNTAEYIDAIMSRITLPGSIFLALVAIMPAFAGIFGVKAEFAQF
FGGTSLLILVGVVLDTLQQVESHLLMRHYDGLLNSGRIKGRAGNVAAY
>Mature_448_residues
MRKSIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLTQLHKQTSEGLLALLNMFSGGAFSNASIFALGI
MPYISASIVIQLLAIAVPYFQKIQREGESGRRKINQYTRILTIAILVFQAPSYLLNLKMQAGPSLNASLDWTFFIITSTI
ILAAGSMFILWLGERITDKGIGNGISFIILIGIIARLPQSLFQEFVSRLASPGAGGIIMFLLEIVFLLFVIAAAILLVQG
VRKVPVQYAKRIVGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPITLVGFSNAATASGIVRAFVDHTSFWYNFVFAI
LIIVFTYFYTAITINPNQMAEDMKRNNGFIPGIKPGKNTAEYIDAIMSRITLPGSIFLALVAIMPAFAGIFGVKAEFAQF
FGGTSLLILVGVVLDTLQQVESHLLMRHYDGLLNSGRIKGRAGNVAAY

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=431, Percent_Identity=39.4431554524362, Blast_Score=278, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49280; Mature: 49280

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS00755 SECY_1 ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLTQLHKQTSEGLLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
LLNMFSGGAFSNASIFALGIMPYISASIVIQLLAIAVPYFQKIQREGESGRRKINQYTRI
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LTIAILVFQAPSYLLNLKMQAGPSLNASLDWTFFIITSTIILAAGSMFILWLGERITDKG
HHHHHHHHHCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
IGNGISFIILIGIIARLPQSLFQEFVSRLASPGAGGIIMFLLEIVFLLFVIAAAILLVQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRKVPVQYAKRIVGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPITLVGFSNAATAS
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GIVRAFVDHTSFWYNFVFAILIIVFTYFYTAITINPNQMAEDMKRNNGFIPGIKPGKNTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCCCCCCCCHH
EYIDAIMSRITLPGSIFLALVAIMPAFAGIFGVKAEFAQFFGGTSLLILVGVVLDTLQQV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ESHLLMRHYDGLLNSGRIKGRAGNVAAY
HHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKSIETLKNIWKIEDLRQRILITILFVAIYRFGSYVVLPGINPAMLTQLHKQTSEGLLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHH
LLNMFSGGAFSNASIFALGIMPYISASIVIQLLAIAVPYFQKIQREGESGRRKINQYTRI
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LTIAILVFQAPSYLLNLKMQAGPSLNASLDWTFFIITSTIILAAGSMFILWLGERITDKG
HHHHHHHHHCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
IGNGISFIILIGIIARLPQSLFQEFVSRLASPGAGGIIMFLLEIVFLLFVIAAAILLVQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRKVPVQYAKRIVGNKQYGGARQYIPLKVNAANVMPIIFAQAIMFIPITLVGFSNAATAS
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
GIVRAFVDHTSFWYNFVFAILIIVFTYFYTAITINPNQMAEDMKRNNGFIPGIKPGKNTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCCCCCCCCCCCCHH
EYIDAIMSRITLPGSIFLALVAIMPAFAGIFGVKAEFAQFFGGTSLLILVGVVLDTLQQV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ESHLLMRHYDGLLNSGRIKGRAGNVAAY
HHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9350347; 12788972 [H]