| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150003238
Identifier: 150003238
GI number: 150003238
Start: 928660
End: 929418
Strand: Direct
Name: 150003238
Synonym: BVU_0654
Alternate gene names: NA
Gene position: 928660-929418 (Clockwise)
Preceding gene: 150003237
Following gene: 150003239
Centisome position: 17.99
GC content: 51.38
Gene sequence:
>759_bases ATGGTACCATACAACACACCGCAGACGATACGTCCGCTTGAGAAAATGGTCTGTGATTTCGCCTATTCGAACGGCTACGA TCCGATATCCGTTTTCAACGATTTCCTGCGTTATGTCATTCACGGGTTCTCTCCCGGCGCACCGCCCCTTATGGACTGGA AATACAAACGGCAGCAGAACAGGCATTTTATGGAAATGCTTACCGGATGGATACGGCTCATGCAGCGGGAATTGCAATCC GGCGGATGGTTTGATGCGTTCGGTGACCTCTTCATGGCAATATCCTCCAAAAGCGGTCGGCAGGTGAACGGACAGTTCTT CACTCCGCCGGATATCTGCGACCTGATGGTCTTATGTACCGATTCGGGGGAGACAGCGACAGGGAAACGTATCTGTGACC CGACATGCGGAAGCGGAAGGCTGCTGCTGGCATATCATGTACGCCACCTGGGTAATTATCTGGTTGCAGAGGATGTCAGC CGTACCTGTTGCCTGATGACCGTTTGCAACATGCTCGTACATGGCTGCATAGGTGAGGTCATCCACCATGACAGCCTCTG CCCCGAAAACTTCATGGACGGCTGGATGGTAAACCATACACTGACCCAGACGGGCATTCCCTCCATTCGCCGGATGAGTG AGGAGGAATATCGGACAAGCAGGAACATGTCCGTTGACCTGCTCAGAAAGCGGAAAGAGAAATTGCGCCAAATGCAGCCT GGCAAGAAACAATTGCCATATAAACAACAAAATTTATAA
Upstream 100 bases:
>100_bases AAAGCGGACACCCATCTCTCTTTCCTTGGCATTTCTCCCGTCAGGATACAGACTGACCACAAAAGACATATAGTAACAAT CTATAAAAAATCAGAGTAAT
Downstream 100 bases:
>100_bases ACAATAAACCGAATGATTATGAAACTGAATGTTAGCAACGAATTGAAATCCCGCCTGATGCATGCGGCGGAAAACGGAAG TGTGATAGCCAAAGATATCC
Product: type I restriction enzyme, M subunit
Products: NA
Alternate protein names: Type I Restriction System-Like Protein
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MVPYNTPQTIRPLEKMVCDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQNRHFMEMLTGWIRLMQRELQS GGWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCTDSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVS RTCCLMTVCNMLVHGCIGEVIHHDSLCPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQP GKKQLPYKQQNL
Sequences:
>Translated_252_residues MVPYNTPQTIRPLEKMVCDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQNRHFMEMLTGWIRLMQRELQS GGWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCTDSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVS RTCCLMTVCNMLVHGCIGEVIHHDSLCPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQP GKKQLPYKQQNL >Mature_252_residues MVPYNTPQTIRPLEKMVCDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQNRHFMEMLTGWIRLMQRELQS GGWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCTDSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVS RTCCLMTVCNMLVHGCIGEVIHHDSLCPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQP GKKQLPYKQQNL
Specific function: Unknown
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29019; Mature: 29019
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPYNTPQTIRPLEKMVCDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQN CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RHFMEMLTGWIRLMQRELQSGGWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEHEEC DSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVSRTCCLMTVCNMLVHGCIGEV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHHDSLCPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQP HHHCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC GKKQLPYKQQNL CHHCCCCHHCCC >Mature Secondary Structure MVPYNTPQTIRPLEKMVCDFAYSNGYDPISVFNDFLRYVIHGFSPGAPPLMDWKYKRQQN CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH RHFMEMLTGWIRLMQRELQSGGWFDAFGDLFMAISSKSGRQVNGQFFTPPDICDLMVLCT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEHEEC DSGETATGKRICDPTCGSGRLLLAYHVRHLGNYLVAEDVSRTCCLMTVCNMLVHGCIGEV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHHDSLCPENFMDGWMVNHTLTQTGIPSIRRMSEEEYRTSRNMSVDLLRKRKEKLRQMQP HHHCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC GKKQLPYKQQNL CHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA