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The map label for this gene is ccmC [H]

Identifier: 148828253

GI number: 148828253

Start: 1684370

End: 1685110

Strand: Direct

Name: ccmC [H]

Synonym: CGSHiGG_09095

Alternate gene names: 148828253

Gene position: 1684370-1685110 (Clockwise)

Preceding gene: 148828252

Following gene: 148828254

Centisome position: 89.25

GC content: 41.57

Gene sequence:

>741_bases
ATGTGGAAGTGGTTACATCCTTATGCAAAACCAGAAACTCAATATCGTATCTGCGGTAAATTGAGTCCGTTATTTGCATT
TTTAACGCTTATCTTACTCGGTGTTGGCATTGTATGGGGCTTAGCATTCGCCCCAGCAGATTACCAACAGGGCAATAGTT
TCCGAATTATGTATGTACATGTGCCGACAGCGATTTGGTCAATGGGTGTGTACGGTTCAATGGCGATTGCAGCTGTGGTT
GCCCTAGTGTGGCAAATTAAGCAAGCTCATCTCGCAATGATTGCAATGGCGCCAATTGGTGCATTGTTTACTTTCTTATC
GCTTGTTACGGGGGCAATTTGGGGGAAACCAATGTGGGGTACTTGGTGGGTGTGGGATGCTCGCTTAACTGCAGAATTGA
TTTTATTCTTTCTTTATCTTGGTATCTTAGCCCTTTATTCTGCTTTTTCAGATCGTAACATAGGTGCAAAAGCGGCGGGG
ATTTTATGCATTACAACGGTCGTGATTTTACCGATTATTCATTTTTCGGTGGAGTGGTGGAACACATTACATCAAGGGGC
GAGTATTACCAAATTTGAAAAACCATCCATTGCAATTCCAATGTTGGTTCCATTGATTTTGTGTATCTTCGGTTTTTTGA
CCTTGTATATTTGGCTTACTTTAGTTCGTTATCGCGTGGAATTATTGAAAGAAGATGCGAAACGTCCTTGGGTTAAAGCA
TTAGCTCAAACACTGAAATAA

Upstream 100 bases:

>100_bases
TGCCATCGCGGCAGCGTTGCGAATTAGTTTAGATAATTAATTTTATTTCATTGTATAAAAGTGCGGTAGTTTTTCTCTTT
AATTTTTAAGGATCTTTTTT

Downstream 100 bases:

>100_bases
AGTGCGGTTAGTTTTTAGCGATTTTTTATAAGGAATATTTTATGTTTTTCCAAACTTGGAGTGATTTTTTTAATATGGGT
GGCTACGGTTTTTACGTATG

Product: heme exporter protein C

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MWKWLHPYAKPETQYRICGKLSPLFAFLTLILLGVGIVWGLAFAPADYQQGNSFRIMYVHVPTAIWSMGVYGSMAIAAVV
ALVWQIKQAHLAMIAMAPIGALFTFLSLVTGAIWGKPMWGTWWVWDARLTAELILFFLYLGILALYSAFSDRNIGAKAAG
ILCITTVVILPIIHFSVEWWNTLHQGASITKFEKPSIAIPMLVPLILCIFGFLTLYIWLTLVRYRVELLKEDAKRPWVKA
LAQTLK

Sequences:

>Translated_246_residues
MWKWLHPYAKPETQYRICGKLSPLFAFLTLILLGVGIVWGLAFAPADYQQGNSFRIMYVHVPTAIWSMGVYGSMAIAAVV
ALVWQIKQAHLAMIAMAPIGALFTFLSLVTGAIWGKPMWGTWWVWDARLTAELILFFLYLGILALYSAFSDRNIGAKAAG
ILCITTVVILPIIHFSVEWWNTLHQGASITKFEKPSIAIPMLVPLILCIFGFLTLYIWLTLVRYRVELLKEDAKRPWVKA
LAQTLK
>Mature_246_residues
MWKWLHPYAKPETQYRICGKLSPLFAFLTLILLGVGIVWGLAFAPADYQQGNSFRIMYVHVPTAIWSMGVYGSMAIAAVV
ALVWQIKQAHLAMIAMAPIGALFTFLSLVTGAIWGKPMWGTWWVWDARLTAELILFFLYLGILALYSAFSDRNIGAKAAG
ILCITTVVILPIIHFSVEWWNTLHQGASITKFEKPSIAIPMLVPLILCIFGFLTLYIWLTLVRYRVELLKEDAKRPWVKA
LAQTLK

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=241, Percent_Identity=60.1659751037344, Blast_Score=289, Evalue=1e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27761; Mature: 27761

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCC
>Mature Secondary Structure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HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]