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The map label for this gene is rpsT

Identifier: 148828145

GI number: 148828145

Start: 1556497

End: 1556601

Strand: Direct

Name: rpsT

Synonym: CGSHiGG_08415

Alternate gene names: NA

Gene position: 1556497-1556601 (Clockwise)

Preceding gene: 148828143

Following gene: 148828146

Centisome position: 82.48

GC content: 33.33

Gene sequence:

>105_bases
GTGCAAAATTCTAGCAATATCTTCACAACAGATAAAGCAGCAAATGAATTTAGTTTTCCTGATCTGAAAAACTTCCGCTA
TAATGACCGCACTTTTTTACGTTAA

Upstream 100 bases:

>100_bases
TGCGGATTGTTGGCTATCAAACATTGAACAGCCAGACAGCAATGCTGCCATACCTAAGGTTGCAATTAATTTCACATTTG
ATCCTTATAAAAGTGAGAAT

Downstream 100 bases:

>100_bases
TTAAAAGGAATTCTTATGCAAAATCCAAAAGATGATGTTTTATATGCGCCTGTTGAATGGATCGATCACAGTGAAGGCTA
TAGCGATATTCGCTATCATA

Product: 30S ribosomal protein S20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 34; Mature: 34

Protein sequence:

>34_residues
MQNSSNIFTTDKAANEFSFPDLKNFRYNDRTFLR

Sequences:

>Translated_34_residues
MQNSSNIFTTDKAANEFSFPDLKNFRYNDRTFLR
>Mature_34_residues
MQNSSNIFTTDKAANEFSFPDLKNFRYNDRTFLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y967_HAEIN (P44086)

Other databases:

- EMBL:   L42023
- PIR:   E64017
- RefSeq:   NP_439128.1
- GeneID:   949914
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0967
- NMPDR:   fig|71421.1.peg.933
- TIGR:   HI_0967
- HOGENOM:   HBG495203
- ProtClustDB:   CLSK808472
- BioCyc:   HINF71421:HI_0967-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4090; Mature: 4090

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNSSNIFTTDKAANEFSFPDLKNFRYNDRTFLR
CCCCCCEEECCCCCCCCCCCCCCCCEECCEEECC
>Mature Secondary Structure
MQNSSNIFTTDKAANEFSFPDLKNFRYNDRTFLR
CCCCCCEEECCCCCCCCCCCCCCCCEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800