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The map label for this gene is nrfE [H]

Identifier: 148828113

GI number: 148828113

Start: 1525265

End: 1527172

Strand: Reverse

Name: nrfE [H]

Synonym: CGSHiGG_08245

Alternate gene names: 148828113

Gene position: 1527172-1525265 (Counterclockwise)

Preceding gene: 148828114

Following gene: 148828112

Centisome position: 80.92

GC content: 40.93

Gene sequence:

>1908_bases
ATGCTTCCAGAACTTGGCTTTTTCCTTCTTTTACTCGCAACAGCTAGCGCATTTTTTCTTACGTTAGTACCTCAATTTGG
GTTACTCAAAAAAAATCCGACTTTAATTAATGCCGCTTGGCCACTGAGTTATATTTTTACCCTTGCGACGACGTTATCAA
TTGGTTTGCTTGCTTATTCTTTTGCGGTGGATGACTTCACCCTTGAATATGTAGCGGCACATTCTAATTCCCAATTACCT
ACATTTTTTAAAGTGGCTGCCACTTGGGGCGGACATGAAGGTTCAATGTTGTTTTGGTTATTTTCATTGAGTTTATGGCT
TGCTGCTTTTGCTTTTTTTAATCGAAAAAATAACCGCACTTTTTCCGCTCAATCTTTATCTTTATTGGGATTGATTTGCT
TTGGTTTTTCGGTGTTTATCTTATTTTATTCTAATCCGTTTGGACGCATTTTTCCTGCGCCGGCAGAAGGTCGCGATCTC
AATCCAATGTTGCAAGATGTGGGATTAATTTTCCATCCGCCGTTGTTATATATTGGTTATGTGGGCTTTGCGGTGAATTT
TGCGATGAGTTTGAGTGCGTTGATTTATAACCAATCAGCACGACAAATTGCACGCTCAATGCGTGGCTGGGTGTTGTTTT
CTTGGTCGTTTTTAACCATTGGCATTGTGCTTGGTGCGTGGTGGGCGTATTACGAACTCGGCTGGGGCGGTTGGTGGTTC
TGGGACCCAGTAGAAAATGCGTCTTTAATGCCTTGGTTGCTTGGTTTGGCGTTATTACATAGTTTAATGGCAACAGAAAA
ACAAGGTGTATTTAGTTATTGGACAACGCTTTTTTCTTTGCTTGCTTTTGCCTTTAGCGTATTAGGTACGTTTATTGTTC
GTTCTGGCGCACTCACTTCTGTGCACGCTTTTGCATTGGATAACACGCGCGGTTATGTATTGTTATTAATTTTCTTTGTT
TTGACAGTGTTAGCCTTTGGTTTATTCGCTTTGCGTGCGGGCAGTTCATCAGAAAGTGCGGTGAATTTTCAGTTCGTTTC
TAAATCGGGTGGCATTTTATTGCTGAATATTTTGCTGACCATTGCCACTGTTTCTACTTTTTTAGGCACCTTCTACCCAA
TGTTATTCCAAGCGATGAATTGGGGCTCAATTTCGGTGGGAAGTCCTTATTTTAATAGTATTTTCTTCCCAATCATTACA
GTGATTTTAATCTTAATGGTGGTTTCCCTTACCATTCGTTGGGTGCAATTTGATCGCACATTATTGATACGTTGTGGGTG
GTTGCTTATTCCGTCTTTGATTCTTGCATGCCTAATGATTTGGCAACAGCTACGCCATAATTCTGCGTTGAATTTTCACG
CTTTCGCCTTTGTGTTATTAACTCTTGCGATTTGGCTTTTATTCGTCACGTTATGGCAAAATTGGCGACAAATTCGTTTG
TCTCAATTTGGGATGATTTTAGCACACTGTGGCGTGGCGATTGTGACTATTGGTGCGGTGATGACTGGGTATTTTGGCAG
TGAAATTGGTGTGCGTTTAGCACCGCAACAAAGTCAAACGTTAGGGCAATATGAATTTCATTATCGCCAATTTTCTAATG
AAATTGGGCCAAACTTTACGGCAGAAGTCGCCTTTTTTGACGTAACTAAAAATGGTAAACCTTATGCAGAAATTATCCCA
GAACGCCGTTATTACGATGTACGAACAATGACAATGAGTGAAGTGGGGCTTGATGGTGGTTTTTGGGGCGATTTATATAT
TGTGATGGGCGATTCTCTCGGCAAAGGGGAATTTACTTTCCGCTTACATTATAAACCACTGATTCGTTGGCTTTGGGCGG
GCGGTATTTTAATGGCCTTTGGCGCACTTTTTAGCGTCTTCGGATTACGCAGAAAACAGGAAAAATAA

Upstream 100 bases:

>100_bases
AAGTAAATAGCACCTATCAAGGTGCTATTTTTAATTTTATTAATGAAACATACTTGATTAGCGACTTTATCTGCGCATCA
ACGAAAAAAACGACGACATT

Downstream 100 bases:

>100_bases
TGAAAAAACTTATCTTTTTTACACCGCTCTTTGTGCTTTTAGGCGTGTGTATATTATTAATTGCAGGGTTAAATCAAGAT
CCGAAAAAAATTGCTTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 635; Mature: 635

Protein sequence:

>635_residues
MLPELGFFLLLLATASAFFLTLVPQFGLLKKNPTLINAAWPLSYIFTLATTLSIGLLAYSFAVDDFTLEYVAAHSNSQLP
TFFKVAATWGGHEGSMLFWLFSLSLWLAAFAFFNRKNNRTFSAQSLSLLGLICFGFSVFILFYSNPFGRIFPAPAEGRDL
NPMLQDVGLIFHPPLLYIGYVGFAVNFAMSLSALIYNQSARQIARSMRGWVLFSWSFLTIGIVLGAWWAYYELGWGGWWF
WDPVENASLMPWLLGLALLHSLMATEKQGVFSYWTTLFSLLAFAFSVLGTFIVRSGALTSVHAFALDNTRGYVLLLIFFV
LTVLAFGLFALRAGSSSESAVNFQFVSKSGGILLLNILLTIATVSTFLGTFYPMLFQAMNWGSISVGSPYFNSIFFPIIT
VILILMVVSLTIRWVQFDRTLLIRCGWLLIPSLILACLMIWQQLRHNSALNFHAFAFVLLTLAIWLLFVTLWQNWRQIRL
SQFGMILAHCGVAIVTIGAVMTGYFGSEIGVRLAPQQSQTLGQYEFHYRQFSNEIGPNFTAEVAFFDVTKNGKPYAEIIP
ERRYYDVRTMTMSEVGLDGGFWGDLYIVMGDSLGKGEFTFRLHYKPLIRWLWAGGILMAFGALFSVFGLRRKQEK

Sequences:

>Translated_635_residues
MLPELGFFLLLLATASAFFLTLVPQFGLLKKNPTLINAAWPLSYIFTLATTLSIGLLAYSFAVDDFTLEYVAAHSNSQLP
TFFKVAATWGGHEGSMLFWLFSLSLWLAAFAFFNRKNNRTFSAQSLSLLGLICFGFSVFILFYSNPFGRIFPAPAEGRDL
NPMLQDVGLIFHPPLLYIGYVGFAVNFAMSLSALIYNQSARQIARSMRGWVLFSWSFLTIGIVLGAWWAYYELGWGGWWF
WDPVENASLMPWLLGLALLHSLMATEKQGVFSYWTTLFSLLAFAFSVLGTFIVRSGALTSVHAFALDNTRGYVLLLIFFV
LTVLAFGLFALRAGSSSESAVNFQFVSKSGGILLLNILLTIATVSTFLGTFYPMLFQAMNWGSISVGSPYFNSIFFPIIT
VILILMVVSLTIRWVQFDRTLLIRCGWLLIPSLILACLMIWQQLRHNSALNFHAFAFVLLTLAIWLLFVTLWQNWRQIRL
SQFGMILAHCGVAIVTIGAVMTGYFGSEIGVRLAPQQSQTLGQYEFHYRQFSNEIGPNFTAEVAFFDVTKNGKPYAEIIP
ERRYYDVRTMTMSEVGLDGGFWGDLYIVMGDSLGKGEFTFRLHYKPLIRWLWAGGILMAFGALFSVFGLRRKQEK
>Mature_635_residues
MLPELGFFLLLLATASAFFLTLVPQFGLLKKNPTLINAAWPLSYIFTLATTLSIGLLAYSFAVDDFTLEYVAAHSNSQLP
TFFKVAATWGGHEGSMLFWLFSLSLWLAAFAFFNRKNNRTFSAQSLSLLGLICFGFSVFILFYSNPFGRIFPAPAEGRDL
NPMLQDVGLIFHPPLLYIGYVGFAVNFAMSLSALIYNQSARQIARSMRGWVLFSWSFLTIGIVLGAWWAYYELGWGGWWF
WDPVENASLMPWLLGLALLHSLMATEKQGVFSYWTTLFSLLAFAFSVLGTFIVRSGALTSVHAFALDNTRGYVLLLIFFV
LTVLAFGLFALRAGSSSESAVNFQFVSKSGGILLLNILLTIATVSTFLGTFYPMLFQAMNWGSISVGSPYFNSIFFPIIT
VILILMVVSLTIRWVQFDRTLLIRCGWLLIPSLILACLMIWQQLRHNSALNFHAFAFVLLTLAIWLLFVTLWQNWRQIRL
SQFGMILAHCGVAIVTIGAVMTGYFGSEIGVRLAPQQSQTLGQYEFHYRQFSNEIGPNFTAEVAFFDVTKNGKPYAEIIP
ERRYYDVRTMTMSEVGLDGGFWGDLYIVMGDSLGKGEFTFRLHYKPLIRWLWAGGILMAFGALFSVFGLRRKQEK

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG1138

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

Organism=Escherichia coli, GI1788524, Length=641, Percent_Identity=40.7176287051482, Blast_Score=468, Evalue=1e-133,
Organism=Escherichia coli, GI1790511, Length=355, Percent_Identity=46.7605633802817, Blast_Score=299, Evalue=4e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003567
- InterPro:   IPR003568
- InterPro:   IPR003570
- InterPro:   IPR017563 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 71498; Mature: 71498

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPELGFFLLLLATASAFFLTLVPQFGLLKKNPTLINAAWPLSYIFTLATTLSIGLLAYS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH
FAVDDFTLEYVAAHSNSQLPTFFKVAATWGGHEGSMLFWLFSLSLWLAAFAFFNRKNNRT
HHHCCHHHHHHEECCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE
FSAQSLSLLGLICFGFSVFILFYSNPFGRIFPAPAEGRDLNPMLQDVGLIFHPPLLYIGY
ECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCHHHHHHH
VGFAVNFAMSLSALIYNQSARQIARSMRGWVLFSWSFLTIGIVLGAWWAYYELGWGGWWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEE
WDPVENASLMPWLLGLALLHSLMATEKQGVFSYWTTLFSLLAFAFSVLGTFIVRSGALTS
ECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VHAFALDNTRGYVLLLIFFVLTVLAFGLFALRAGSSSESAVNFQFVSKSGGILLLNILLT
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHH
IATVSTFLGTFYPMLFQAMNWGSISVGSPYFNSIFFPIITVILILMVVSLTIRWVQFDRT
HHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
LLIRCGWLLIPSLILACLMIWQQLRHNSALNFHAFAFVLLTLAIWLLFVTLWQNWRQIRL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQFGMILAHCGVAIVTIGAVMTGYFGSEIGVRLAPQQSQTLGQYEFHYRQFSNEIGPNFT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCE
AEVAFFDVTKNGKPYAEIIPERRYYDVRTMTMSEVGLDGGFWGDLYIVMGDSLGKGEFTF
EEEEEEEECCCCCCHHHHCCCCCEEEEEEEEHHHHCCCCCCCCEEEEEEECCCCCCEEEE
RLHYKPLIRWLWAGGILMAFGALFSVFGLRRKQEK
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPELGFFLLLLATASAFFLTLVPQFGLLKKNPTLINAAWPLSYIFTLATTLSIGLLAYS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHH
FAVDDFTLEYVAAHSNSQLPTFFKVAATWGGHEGSMLFWLFSLSLWLAAFAFFNRKNNRT
HHHCCHHHHHHEECCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE
FSAQSLSLLGLICFGFSVFILFYSNPFGRIFPAPAEGRDLNPMLQDVGLIFHPPLLYIGY
ECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCHHHHHHH
VGFAVNFAMSLSALIYNQSARQIARSMRGWVLFSWSFLTIGIVLGAWWAYYELGWGGWWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEE
WDPVENASLMPWLLGLALLHSLMATEKQGVFSYWTTLFSLLAFAFSVLGTFIVRSGALTS
ECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VHAFALDNTRGYVLLLIFFVLTVLAFGLFALRAGSSSESAVNFQFVSKSGGILLLNILLT
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHH
IATVSTFLGTFYPMLFQAMNWGSISVGSPYFNSIFFPIITVILILMVVSLTIRWVQFDRT
HHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
LLIRCGWLLIPSLILACLMIWQQLRHNSALNFHAFAFVLLTLAIWLLFVTLWQNWRQIRL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQFGMILAHCGVAIVTIGAVMTGYFGSEIGVRLAPQQSQTLGQYEFHYRQFSNEIGPNFT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCE
AEVAFFDVTKNGKPYAEIIPERRYYDVRTMTMSEVGLDGGFWGDLYIVMGDSLGKGEFTF
EEEEEEEECCCCCCHHHHCCCCCEEEEEEEEHHHHCCCCCCCCEEEEEEECCCCCCEEEE
RLHYKPLIRWLWAGGILMAFGALFSVFGLRRKQEK
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]