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The map label for this gene is rseB [H]

Identifier: 148827771

GI number: 148827771

Start: 1124874

End: 1125821

Strand: Reverse

Name: rseB [H]

Synonym: CGSHiGG_06190

Alternate gene names: 148827771

Gene position: 1125821-1124874 (Counterclockwise)

Preceding gene: 148827772

Following gene: 148827765

Centisome position: 59.66

GC content: 35.13

Gene sequence:

>948_bases
ATGAAAAAAATCCCATTAAAATTTACCGCACTTTCTCTTTCTTTGCTATTAAGTAGCATTGCTTCTGCTGAAGAGCTTTC
TGCGAAGCAGTCTTTAGATAAAATGACACAAGCATTGGATAATCTCAATTATGAAATTGCCTTTGTGCAAACTACTCCCG
CAAATATGGATTCGTTTCGTTATCGACATATCAAACAAGATAACAAAACTTACGCACAATTAGTTACTTTAGATGGCCAT
CAGCAAGAAATTATTCAGCGTGATAATTTAGTCAGTTATTTTCAGCCAAATGCACAAGCATTTACGCTTAATAGTGGCAA
TATAGTTGATGCGATGCCAGCAGTTGTGCGTGCAAATTTTGATAAGCTTTCTTCTGATTATGATTTCGTAAAATTAGGTA
AAGATCGTGTTGCTGGGCGTTTCGTTGATACGATTAGAATTGTGCCTAAAGATGATTTTCGGTATCAATATTTGGTGTTT
ATCGATGAAGAAAATGGCTTGTTATTACGCGGTGATATGCTTGATCGCGAAGGCAAACTACTTGATCAATTTAGAGTTGT
AACACTTTACATCGATGACAGATTGAGAGGATTAACGGATTATATTAACAAGGTATCATTGCCCCCTTTATTGAAAGAAA
GTAAAAATGAACAAAGTTCAGATATAACTTGGTCTGCAGGTTGGTTGCCACAAGGTTTTTCTTTAATTCGATATACTCAA
GAAATATTAGAAAATGAAATCATAGATAGCGCATTATATAGTGATGGCTTATTTACTTTTACGTTGTTTGTCTCTAATGT
AGGCTCTAATGACCTACCAGAAAATACTTGGAAACAAGGGGCTTATACGATTTATAGCGAGGTCATCGGAGGAAAAGAAA
TTACTTTTATTGGGCAATTACCAATCTCGACGGCAAAACGCATTGTACAAGAAGTCAAATTTCGATAA

Upstream 100 bases:

>100_bases
AGTAGCAGTCAAGTAAGATAAATTGGTTTCCTTTGTTCAGATTATTGATTCACCACCTAATTGTTATTTAGTGTGGTGAA
TTTTTATCCTTTAGATTTCT

Downstream 100 bases:

>100_bases
AAAGTGCGGTAATTTTTTACGATATTTTTATCAATAACTAATTTTGAGTTAGGGATTAATTAAGATTCGCACGTTTTACG
TGCGAATTTTTATTTTCTTA

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFRYRHIKQDNKTYAQLVTLDGH
QQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANFDKLSSDYDFVKLGKDRVAGRFVDTIRIVPKDDFRYQYLVF
IDEENGLLLRGDMLDREGKLLDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQLPISTAKRIVQEVKFR

Sequences:

>Translated_315_residues
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFRYRHIKQDNKTYAQLVTLDGH
QQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANFDKLSSDYDFVKLGKDRVAGRFVDTIRIVPKDDFRYQYLVF
IDEENGLLLRGDMLDREGKLLDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQLPISTAKRIVQEVKFR
>Mature_315_residues
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFRYRHIKQDNKTYAQLVTLDGH
QQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANFDKLSSDYDFVKLGKDRVAGRFVDTIRIVPKDDFRYQYLVF
IDEENGLLLRGDMLDREGKLLDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQLPISTAKRIVQEVKFR

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=317, Percent_Identity=38.801261829653, Blast_Score=240, Evalue=9e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 35886; Mature: 35886

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHH
YRHIKQDNKTYAQLVTLDGHQQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANF
HHHHCCCCCEEEEEEEECCHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCH
DKLSSDYDFVKLGKDRVAGRFVDTIRIVPKDDFRYQYLVFIDEENGLLLRGDMLDREGKL
HHHCCCCCCEECCCHHHHHHEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCCCH
LDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
HHHEEEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQL
HHHHHHHHHHHHHCCCHHEEEEEHHHCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEECC
PISTAKRIVQEVKFR
CHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIPLKFTALSLSLLLSSIASAEELSAKQSLDKMTQALDNLNYEIAFVQTTPANMDSFR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHH
YRHIKQDNKTYAQLVTLDGHQQEIIQRDNLVSYFQPNAQAFTLNSGNIVDAMPAVVRANF
HHHHCCCCCEEEEEEEECCHHHHHHHHCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCH
DKLSSDYDFVKLGKDRVAGRFVDTIRIVPKDDFRYQYLVFIDEENGLLLRGDMLDREGKL
HHHCCCCCCEECCCHHHHHHEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCCCH
LDQFRVVTLYIDDRLRGLTDYINKVSLPPLLKESKNEQSSDITWSAGWLPQGFSLIRYTQ
HHHEEEEEEEECCHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH
EILENEIIDSALYSDGLFTFTLFVSNVGSNDLPENTWKQGAYTIYSEVIGGKEITFIGQL
HHHHHHHHHHHHHCCCHHEEEEEHHHCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEEECC
PISTAKRIVQEVKFR
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]