Click here to switch to the map view.

The map label for this gene is ureF [H]

Identifier: 148827729

GI number: 148827729

Start: 1085395

End: 1086102

Strand: Reverse

Name: ureF [H]

Synonym: CGSHiGG_05940

Alternate gene names: 148827729

Gene position: 1086102-1085395 (Counterclockwise)

Preceding gene: 148827730

Following gene: 148827728

Centisome position: 57.55

GC content: 47.18

Gene sequence:

>708_bases
TTGGCACAAACATTAAACCGCTCTTTAACGGATTTAGGTGCGTTGTTGCACTTGGTCGATCCCACCTTACCGATTGGCGG
ATTTAACCATTCCAATGGCTTGGAAACCTTCGTCCAGCAACGTGTGGTAGAAAGCAAAGCGACCCTAGAAGAATATGTGC
AAACCCAGCTTTTACAAAACTGGATTTACAACGACGGGGCGTATCTTTCCCTTGCCTTCGATGCAATGAACGAGGGCAAT
TTTGACCGCTTGTGCGAACTGGATTGGCAACTTTCCGCCACCAAAGTGGCACGCGAAAGTCGTGAAGGGAGTTTCAAACT
CGGAGTACGATTGCTGAAAATTTTTATTCGCTATGAAACACATGCGTTGCTCACAGCTTACCAGAAAGCGATTGCAGAAA
AACGAGTACAGGGCTATTTCCCGATAGTGTTTGCAATGGTTGCTCAAGCCATGGGCTTAACCAAAGCCGACACACTCTAT
GCGTTCTACTATAACGCAGCAGTTGGTGTAATCACTAACGGCGTGAAGCTAATTCCTCTCAGCCAAATGGATGGGCAAGA
TATTCTGTTTGACTTGCGTGGCTCGCTCGTACAAGCGGTGGAATTAAGCTTTGACCCTGACGAAGAATGGCTTGGTGCGG
CAACGCTGGCGAATGATATTCGGGCTATGCAGCACGAAGTGCTTTATACGCGACTTTATATGTCGTAA

Upstream 100 bases:

>100_bases
GTTTAAGCCAAGCTTTGCGTGCCAATTCGGCACAAGGACATGGGCATTCACATAGCCATTCGCACGATCATCACGGTTAT
CATCATCACGGAGATGGAAA

Downstream 100 bases:

>100_bases
GTGCGGTTATTTTTTATTGAGATTTTACTTGTAGGGGCAAATCACATTTGCCCTTGAACATTCGTTGATATATTGGGGCA
AATGTAACTTGCCCCTACAC

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MAQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMNEGN
FDRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYETHALLTAYQKAIAEKRVQGYFPIVFAMVAQAMGLTKADTLY
AFYYNAAVGVITNGVKLIPLSQMDGQDILFDLRGSLVQAVELSFDPDEEWLGAATLANDIRAMQHEVLYTRLYMS

Sequences:

>Translated_235_residues
MAQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMNEGN
FDRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYETHALLTAYQKAIAEKRVQGYFPIVFAMVAQAMGLTKADTLY
AFYYNAAVGVITNGVKLIPLSQMDGQDILFDLRGSLVQAVELSFDPDEEWLGAATLANDIRAMQHEVLYTRLYMS
>Mature_234_residues
AQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMNEGNF
DRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYETHALLTAYQKAIAEKRVQGYFPIVFAMVAQAMGLTKADTLYA
FYYNAAVGVITNGVKLIPLSQMDGQDILFDLRGSLVQAVELSFDPDEEWLGAATLANDIRAMQHEVLYTRLYMS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 26416; Mature: 26284

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIYNDGAYLSLAFDAMNEGNFDRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYET
HHCCCCCEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HALLTAYQKAIAEKRVQGYFPIVFAMVAQAMGLTKADTLYAFYYNAAVGVITNGVKLIPL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEE
SQMDGQDILFDLRGSLVQAVELSFDPDEEWLGAATLANDIRAMQHEVLYTRLYMS
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIYNDGAYLSLAFDAMNEGNFDRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYET
HHCCCCCEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HALLTAYQKAIAEKRVQGYFPIVFAMVAQAMGLTKADTLYAFYYNAAVGVITNGVKLIPL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEE
SQMDGQDILFDLRGSLVQAVELSFDPDEEWLGAATLANDIRAMQHEVLYTRLYMS
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA