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The map label for this gene is rdgC [H]

Identifier: 148827574

GI number: 148827574

Start: 918852

End: 919763

Strand: Direct

Name: rdgC [H]

Synonym: CGSHiGG_05005

Alternate gene names: 148827574

Gene position: 918852-919763 (Clockwise)

Preceding gene: 148827573

Following gene: 148827575

Centisome position: 48.69

GC content: 40.13

Gene sequence:

>912_bases
ATGAGGAATAATAAAAATGTACTGGTTCAAAAATGCAATTATTTACCAATTAACAAAAAAATAGACTTTGAGAATATCGA
AAAACAACTCAAAGAATGTGAATTTACTCCGTGTGGTTCGGCAGATGTTAGCCATTTCGGCTGGTCTGCTCCGCTCGCCA
CCAGCGAAAACTTAGCTCATCAAGCGGATGGAAGAATATTACTTGTAGCCAAACGTGAAGAGAAAATTTTGCCTGTGGAA
GTTGTGAATCGTGAACTCAATAAACGAATCACTGCGCTAGAAGAAAAAGAACAGCGAAAATTAAAGAAAGTAGAACGATT
ATCCCTAAAAGATGATGTGATAGCCACCCTACTTCCGCAGGCATTTTCTCGAATCAAAACGACCGCACTTTACATCGACA
CAATGAAACAACTTATCTTTGTTGATGCTGCATCAAGTAAAACAGCCGAAGATGCACTTGCACTTTTGCGTAAATCGCTT
GGTAGCTTGCCAGTAGTACCGTTGGCGTTTAACTGTGCGCCGTGTGAAGTAATGACAAGATGGGTTACAGATACTGCACC
TGATTGGCTAATCTTGCGTAAGGAAGTGGAAATCCGCGAAAAAGAAGATCTTGGCGTTATTCACTGCAAGCAAAAAGATG
TTGAAGACGAGGAAATTATTGAGCTTGTTCAAAATGGCTTGATCTCTAAACTCGCGCTTGAGTGGGAAAACAACCTTAAA
TTCGTATTAATCGAAGATGGCACGCTGAAACGCCTGAAATTTGACGACAATATCACCGAGCAGAACGATGATATTGTAAA
AGAAGATGTAACTGCTCGTTTTGATGTAGACTTTGTCTTAATGGCGAGCGTGCTTGGTAAAACAGTGGATAGCCTAATAA
AAGAATTTGGCGGGATTAGGGATAGATTATGA

Upstream 100 bases:

>100_bases
TATAGGAAACCTATCTATGGTGGTGATGGTGAGGAAATCGGCTATTACCTTTGAAGATGATGCTTAAAATCTGCCGCTAT
TAATTAGCGGCTTTTTATTT

Downstream 100 bases:

>100_bases
GATTACTTAAACGGCTAGCTGAAAAAGTCCTGATAGACGATCTTAGACGATTGGATAAACATATTGATAAATCTATCGAA
CTCCATGAATTGAAGCTACG

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRNNKNVLVQKCNYLPINKKIDFENIEKQLKECEFTPCGSADVSHFGWSAPLATSENLAHQADGRILLVAKREEKILPVE
VVNRELNKRITALEEKEQRKLKKVERLSLKDDVIATLLPQAFSRIKTTALYIDTMKQLIFVDAASSKTAEDALALLRKSL
GSLPVVPLAFNCAPCEVMTRWVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDVEDEEIIELVQNGLISKLALEWENNLK
FVLIEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIRDRL

Sequences:

>Translated_303_residues
MRNNKNVLVQKCNYLPINKKIDFENIEKQLKECEFTPCGSADVSHFGWSAPLATSENLAHQADGRILLVAKREEKILPVE
VVNRELNKRITALEEKEQRKLKKVERLSLKDDVIATLLPQAFSRIKTTALYIDTMKQLIFVDAASSKTAEDALALLRKSL
GSLPVVPLAFNCAPCEVMTRWVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDVEDEEIIELVQNGLISKLALEWENNLK
FVLIEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIRDRL
>Mature_303_residues
MRNNKNVLVQKCNYLPINKKIDFENIEKQLKECEFTPCGSADVSHFGWSAPLATSENLAHQADGRILLVAKREEKILPVE
VVNRELNKRITALEEKEQRKLKKVERLSLKDDVIATLLPQAFSRIKTTALYIDTMKQLIFVDAASSKTAEDALALLRKSL
GSLPVVPLAFNCAPCEVMTRWVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDVEDEEIIELVQNGLISKLALEWENNLK
FVLIEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIRDRL

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=284, Percent_Identity=47.887323943662, Blast_Score=253, Evalue=9e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 34476; Mature: 34476

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNKNVLVQKCNYLPINKKIDFENIEKQLKECEFTPCGSADVSHFGWSAPLATSENLAH
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QADGRILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERLSLKDDVIATLLPQ
HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
AFSRIKTTALYIDTMKQLIFVDAASSKTAEDALALLRKSLGSLPVVPLAFNCAPCEVMTR
HHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
WVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDVEDEEIIELVQNGLISKLALEWENNLK
HHHCCCCCEEEEECHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCEE
FVLIEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIR
EEEECCCCEEEEECCCCCCCCCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH
DRL
CCC
>Mature Secondary Structure
MRNNKNVLVQKCNYLPINKKIDFENIEKQLKECEFTPCGSADVSHFGWSAPLATSENLAH
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
QADGRILLVAKREEKILPVEVVNRELNKRITALEEKEQRKLKKVERLSLKDDVIATLLPQ
HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
AFSRIKTTALYIDTMKQLIFVDAASSKTAEDALALLRKSLGSLPVVPLAFNCAPCEVMTR
HHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
WVTDTAPDWLILRKEVEIREKEDLGVIHCKQKDVEDEEIIELVQNGLISKLALEWENNLK
HHHCCCCCEEEEECHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCEE
FVLIEDGTLKRLKFDDNITEQNDDIVKEDVTARFDVDFVLMASVLGKTVDSLIKEFGGIR
EEEECCCCEEEEECCCCCCCCCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH
DRL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA